ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A2555:A2511

Extra

PDB:
ATOM 1 O3' C A2554 57.585 -68.409 31.025 1.00 46.98 O
ATOM 2 P C A2555 59.033 -68.012 31.568 1.00 33.79 P
ATOM 3 OP1 C A2555 59.994 -68.519 30.599 1.00 40.23 O
ATOM 4 OP2 C A2555 59.121 -68.469 32.979 1.00 49.84 O
ATOM 5 O5' C A2555 59.012 -66.433 31.532 1.00 37.83 O
ATOM 6 C5' C A2555 59.795 -65.681 32.451 1.00 36.19 C
ATOM 7 C4' C A2555 59.360 -64.236 32.525 1.00 38.33 C
ATOM 8 O4' C A2555 58.047 -64.163 33.122 1.00 44.69 O
ATOM 9 C3' C A2555 60.226 -63.329 33.389 1.00 32.85 C
ATOM 10 O3' C A2555 61.323 -62.810 32.672 1.00 33.04 O
ATOM 11 C2' C A2555 59.257 -62.245 33.853 1.00 38.47 C
ATOM 12 O2' C A2555 59.216 -61.193 32.913 1.00 49.43 O
ATOM 13 C1' C A2555 57.900 -62.964 33.830 1.00 35.30 C
ATOM 14 N1 C A2555 57.391 -63.270 35.174 1.00 28.44 N
ATOM 15 C2 C A2555 56.933 -62.213 35.887 1.00 30.88 C
ATOM 16 O2 C A2555 57.005 -61.132 35.345 1.00 33.52 O
ATOM 17 N3 C A2555 56.460 -62.380 37.107 1.00 34.89 N
ATOM 18 C4 C A2555 56.431 -63.591 37.614 1.00 38.24 C
ATOM 19 N4 C A2555 55.937 -63.708 38.847 1.00 47.03 N
ATOM 20 C5 C A2555 56.889 -64.722 36.901 1.00 32.86 C
ATOM 21 C6 C A2555 57.351 -64.521 35.677 1.00 31.75 C
ATOM 22 P A A2556 62.823 -62.930 33.238 1.00 36.95 P
ATOM 23 OP1 A A2556 63.705 -63.122 32.061 1.00 27.87 O
ATOM 24 OP2 A A2556 62.831 -63.959 34.320 1.00 42.19 O
ATOM 25 O5' A A2556 63.061 -61.503 33.863 1.00 37.93 O
TER

ATOM 1 O3' C B2510 59.099 -71.637 41.307 1.00 36.29 O
ATOM 2 P C B2511 57.668 -71.518 40.607 1.00 36.67 P
ATOM 3 OP1 C B2511 56.869 -72.698 41.027 1.00 40.64 O
ATOM 4 OP2 C B2511 57.907 -71.295 39.161 1.00 38.28 O
ATOM 5 O5' C B2511 57.063 -70.195 41.254 1.00 36.37 O
ATOM 6 C5' C B2511 57.191 -69.940 42.636 1.00 32.58 C
ATOM 7 C4' C B2511 56.633 -68.590 43.018 1.00 35.51 C
ATOM 8 O4' C B2511 57.571 -67.541 42.634 1.00 44.79 O
ATOM 9 C3' C B2511 55.304 -68.200 42.372 1.00 27.66 C
ATOM 10 O3' C B2511 54.623 -67.304 43.263 1.00 35.08 O
ATOM 11 C2' C B2511 55.802 -67.391 41.190 1.00 31.10 C
ATOM 12 O2' C B2511 54.848 -66.567 40.575 1.00 40.66 O
ATOM 13 C1' C B2511 56.867 -66.580 41.889 1.00 33.18 C
ATOM 14 N1 C B2511 57.779 -65.883 40.992 1.00 29.07 N
ATOM 15 C2 C B2511 58.442 -66.686 40.104 1.00 40.33 C
ATOM 16 O2 C B2511 58.218 -67.905 40.212 1.00 53.43 O
ATOM 17 N3 C B2511 59.286 -66.155 39.191 1.00 35.37 N
ATOM 18 C4 C B2511 59.450 -64.851 39.169 1.00 37.39 C
ATOM 19 N4 C B2511 60.297 -64.404 38.249 1.00 39.15 N
ATOM 20 C5 C B2511 58.768 -63.988 40.086 1.00 39.98 C
ATOM 21 C6 C B2511 57.942 -64.537 40.984 1.00 34.67 C
ATOM 22 P U B2512 53.326 -67.763 44.100 1.00 39.84 P
ATOM 23 OP1 U B2512 53.399 -69.233 44.260 1.00 35.55 O
ATOM 24 OP2 U B2512 52.147 -67.177 43.424 1.00 41.60 O
ATOM 25 O5' U B2512 53.550 -67.064 45.518 1.00 45.49 O
TER

Atoms:
C2: (56.933,-62.213,35.887)
OP1: (59.994,-68.519,30.599)
OP2: (59.121,-68.469,32.979)
C4: (56.431,-63.591,37.614)
O5': (59.012,-66.433,31.532)
C3': (60.226,-63.329,33.389)
C1': (57.900,-62.964,33.830)
O4': (58.047,-64.163,33.122)
C5': (59.795,-65.681,32.451)
P: (59.033,-68.012,31.568)
O2: (57.005,-61.132,35.345)
C4': (59.360,-64.236,32.525)
C2': (59.257,-62.245,33.853)
O2': (59.216,-61.193,32.913)
N1: (57.391,-63.270,35.174)
N3: (56.460,-62.380,37.107)
N4: (55.937,-63.708,38.847)
C6: (57.351,-64.521,35.677)
C5: (56.889,-64.722,36.901)
O3': (61.323,-62.810,32.672)
C2: (58.442,-66.686,40.104)
OP1: (56.869,-72.698,41.027)
OP2: (57.907,-71.295,39.161)
C4: (59.450,-64.851,39.169)
O5': (57.063,-70.195,41.254)
C3': (55.304,-68.200,42.372)
C1': (56.867,-66.580,41.889)
O4': (57.571,-67.541,42.634)
C5': (57.191,-69.940,42.636)
P: (57.668,-71.518,40.607)
O2: (58.218,-67.905,40.212)
C4': (56.633,-68.590,43.018)
C2': (55.802,-67.391,41.190)
O2': (54.848,-66.567,40.575)
N1: (57.779,-65.883,40.992)
N3: (59.286,-66.155,39.191)
N4: (60.297,-64.404,38.249)
C6: (57.942,-64.537,40.984)
C5: (58.768,-63.988,40.086)
O3': (54.623,-67.304,43.263)
Image (generated by PyMOL):
PyMOL image
show in jmol