Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A65:A64
Extra
PDB:
ATOM 1 O3' A A 64 -9.758 -40.975 16.512 1.00 59.91 O
ATOM 2 P C A 65 -8.739 -40.964 17.746 1.00 59.28 P
ATOM 3 OP1 C A 65 -8.762 -39.631 18.367 1.00 59.07 O
ATOM 4 OP2 C A 65 -7.460 -41.586 17.339 1.00 60.58 O
ATOM 5 O5' C A 65 -9.463 -41.992 18.729 1.00 60.61 O
ATOM 6 C5' C A 65 -10.817 -41.770 19.136 1.00 61.32 C
ATOM 7 C4' C A 65 -11.642 -43.043 19.226 1.00 62.13 C
ATOM 8 O4' C A 65 -12.595 -43.043 18.140 1.00 62.54 O
ATOM 9 C3' C A 65 -10.902 -44.361 19.054 1.00 63.13 C
ATOM 10 O3' C A 65 -10.370 -44.781 20.287 1.00 64.51 O
ATOM 11 C2' C A 65 -12.004 -45.294 18.571 1.00 63.23 C
ATOM 12 O2' C A 65 -12.853 -45.745 19.603 1.00 63.33 O
ATOM 13 C1' C A 65 -12.777 -44.364 17.652 1.00 62.96 C
ATOM 14 N1 C A 65 -12.374 -44.457 16.204 1.00 63.32 N
ATOM 15 C2 C A 65 -12.726 -45.594 15.461 1.00 64.23 C
ATOM 16 O2 C A 65 -13.356 -46.503 16.014 1.00 64.93 O
ATOM 17 N3 C A 65 -12.369 -45.668 14.150 1.00 64.67 N
ATOM 18 C4 C A 65 -11.688 -44.666 13.586 1.00 64.34 C
ATOM 19 N4 C A 65 -11.355 -44.779 12.299 1.00 65.07 N
ATOM 20 C5 C A 65 -11.315 -43.499 14.321 1.00 63.34 C
ATOM 21 C6 C A 65 -11.675 -43.439 15.610 1.00 62.75 C
ATOM 22 P U A 66 -8.985 -45.577 20.319 1.00 66.49 P
ATOM 23 OP1 U A 66 -8.644 -45.758 21.749 1.00 66.20 O
ATOM 24 OP2 U A 66 -8.010 -44.911 19.415 1.00 65.70 O
ATOM 25 O5' U A 66 -9.382 -46.988 19.658 1.00 67.96 O
TER
ATOM 1 O3' A B 63 -10.758 -40.428 11.008 1.00 56.97 O
ATOM 2 P A B 64 -9.476 -41.345 11.263 1.00 56.84 P
ATOM 3 OP1 A B 64 -8.322 -40.671 10.626 1.00 56.17 O
ATOM 4 OP2 A B 64 -9.812 -42.745 10.916 1.00 57.20 O
ATOM 5 O5' A B 64 -9.353 -41.277 12.855 1.00 56.61 O
ATOM 6 C5' A B 64 -8.113 -41.287 13.559 1.00 57.57 C
ATOM 7 C4' A B 64 -8.238 -40.255 14.653 1.00 57.94 C
ATOM 8 O4' A B 64 -8.113 -38.970 14.016 1.00 58.57 O
ATOM 9 C3' A B 64 -9.638 -40.271 15.251 1.00 59.19 C
ATOM 10 O3' A B 64 -9.758 -40.975 16.512 1.00 59.91 O
ATOM 11 C2' A B 64 -10.092 -38.815 15.312 1.00 59.14 C
ATOM 12 O2' A B 64 -10.255 -38.369 16.637 1.00 60.15 O
ATOM 13 C1' A B 64 -8.963 -38.041 14.643 1.00 58.73 C
ATOM 14 N9 A B 64 -9.486 -37.064 13.689 1.00 58.73 N
ATOM 15 C8 A B 64 -10.088 -37.308 12.485 1.00 59.40 C
ATOM 16 N7 A B 64 -10.482 -36.225 11.856 1.00 59.62 N
ATOM 17 C5 A B 64 -10.118 -35.198 12.711 1.00 59.30 C
ATOM 18 C6 A B 64 -10.255 -33.794 12.632 1.00 59.66 C
ATOM 19 N6 A B 64 -10.819 -33.169 11.597 1.00 60.30 N
ATOM 20 N1 A B 64 -9.784 -33.048 13.660 1.00 59.54 N
ATOM 21 C2 A B 64 -9.214 -33.672 14.701 1.00 59.11 C
ATOM 22 N3 A B 64 -9.032 -34.983 14.884 1.00 58.62 N
ATOM 23 C4 A B 64 -9.506 -35.698 13.847 1.00 58.71 C
ATOM 24 P C B 65 -8.739 -40.964 17.746 1.00 59.28 P
ATOM 25 OP1 C B 65 -8.762 -39.631 18.367 1.00 59.07 O
ATOM 26 OP2 C B 65 -7.460 -41.586 17.339 1.00 60.58 O
ATOM 27 O5' C B 65 -9.463 -41.992 18.729 1.00 60.61 O
TER
ATOM 2 P C A 65 -8.739 -40.964 17.746 1.00 59.28 P
ATOM 3 OP1 C A 65 -8.762 -39.631 18.367 1.00 59.07 O
ATOM 4 OP2 C A 65 -7.460 -41.586 17.339 1.00 60.58 O
ATOM 5 O5' C A 65 -9.463 -41.992 18.729 1.00 60.61 O
ATOM 6 C5' C A 65 -10.817 -41.770 19.136 1.00 61.32 C
ATOM 7 C4' C A 65 -11.642 -43.043 19.226 1.00 62.13 C
ATOM 8 O4' C A 65 -12.595 -43.043 18.140 1.00 62.54 O
ATOM 9 C3' C A 65 -10.902 -44.361 19.054 1.00 63.13 C
ATOM 10 O3' C A 65 -10.370 -44.781 20.287 1.00 64.51 O
ATOM 11 C2' C A 65 -12.004 -45.294 18.571 1.00 63.23 C
ATOM 12 O2' C A 65 -12.853 -45.745 19.603 1.00 63.33 O
ATOM 13 C1' C A 65 -12.777 -44.364 17.652 1.00 62.96 C
ATOM 14 N1 C A 65 -12.374 -44.457 16.204 1.00 63.32 N
ATOM 15 C2 C A 65 -12.726 -45.594 15.461 1.00 64.23 C
ATOM 16 O2 C A 65 -13.356 -46.503 16.014 1.00 64.93 O
ATOM 17 N3 C A 65 -12.369 -45.668 14.150 1.00 64.67 N
ATOM 18 C4 C A 65 -11.688 -44.666 13.586 1.00 64.34 C
ATOM 19 N4 C A 65 -11.355 -44.779 12.299 1.00 65.07 N
ATOM 20 C5 C A 65 -11.315 -43.499 14.321 1.00 63.34 C
ATOM 21 C6 C A 65 -11.675 -43.439 15.610 1.00 62.75 C
ATOM 22 P U A 66 -8.985 -45.577 20.319 1.00 66.49 P
ATOM 23 OP1 U A 66 -8.644 -45.758 21.749 1.00 66.20 O
ATOM 24 OP2 U A 66 -8.010 -44.911 19.415 1.00 65.70 O
ATOM 25 O5' U A 66 -9.382 -46.988 19.658 1.00 67.96 O
TER
ATOM 1 O3' A B 63 -10.758 -40.428 11.008 1.00 56.97 O
ATOM 2 P A B 64 -9.476 -41.345 11.263 1.00 56.84 P
ATOM 3 OP1 A B 64 -8.322 -40.671 10.626 1.00 56.17 O
ATOM 4 OP2 A B 64 -9.812 -42.745 10.916 1.00 57.20 O
ATOM 5 O5' A B 64 -9.353 -41.277 12.855 1.00 56.61 O
ATOM 6 C5' A B 64 -8.113 -41.287 13.559 1.00 57.57 C
ATOM 7 C4' A B 64 -8.238 -40.255 14.653 1.00 57.94 C
ATOM 8 O4' A B 64 -8.113 -38.970 14.016 1.00 58.57 O
ATOM 9 C3' A B 64 -9.638 -40.271 15.251 1.00 59.19 C
ATOM 10 O3' A B 64 -9.758 -40.975 16.512 1.00 59.91 O
ATOM 11 C2' A B 64 -10.092 -38.815 15.312 1.00 59.14 C
ATOM 12 O2' A B 64 -10.255 -38.369 16.637 1.00 60.15 O
ATOM 13 C1' A B 64 -8.963 -38.041 14.643 1.00 58.73 C
ATOM 14 N9 A B 64 -9.486 -37.064 13.689 1.00 58.73 N
ATOM 15 C8 A B 64 -10.088 -37.308 12.485 1.00 59.40 C
ATOM 16 N7 A B 64 -10.482 -36.225 11.856 1.00 59.62 N
ATOM 17 C5 A B 64 -10.118 -35.198 12.711 1.00 59.30 C
ATOM 18 C6 A B 64 -10.255 -33.794 12.632 1.00 59.66 C
ATOM 19 N6 A B 64 -10.819 -33.169 11.597 1.00 60.30 N
ATOM 20 N1 A B 64 -9.784 -33.048 13.660 1.00 59.54 N
ATOM 21 C2 A B 64 -9.214 -33.672 14.701 1.00 59.11 C
ATOM 22 N3 A B 64 -9.032 -34.983 14.884 1.00 58.62 N
ATOM 23 C4 A B 64 -9.506 -35.698 13.847 1.00 58.71 C
ATOM 24 P C B 65 -8.739 -40.964 17.746 1.00 59.28 P
ATOM 25 OP1 C B 65 -8.762 -39.631 18.367 1.00 59.07 O
ATOM 26 OP2 C B 65 -7.460 -41.586 17.339 1.00 60.58 O
ATOM 27 O5' C B 65 -9.463 -41.992 18.729 1.00 60.61 O
TER
Atoms:
C2: (-12.726,-45.594,15.461)
OP1: (-8.762,-39.631,18.367)
OP2: (-7.460,-41.586,17.339)
C4: (-11.688,-44.666,13.586)
O5': (-9.463,-41.992,18.729)
C3': (-10.902,-44.361,19.054)
C1': (-12.777,-44.364,17.652)
O4': (-12.595,-43.043,18.140)
C5': (-10.817,-41.770,19.136)
P: (-8.739,-40.964,17.746)
O2: (-13.356,-46.503,16.014)
C4': (-11.642,-43.043,19.226)
C2': (-12.004,-45.294,18.571)
O2': (-12.853,-45.745,19.603)
N1: (-12.374,-44.457,16.204)
N3: (-12.369,-45.668,14.150)
N4: (-11.355,-44.779,12.299)
C6: (-11.675,-43.439,15.610)
C5: (-11.315,-43.499,14.321)
O3': (-10.370,-44.781,20.287)
OP1: (-8.762,-39.631,18.367)
OP2: (-7.460,-41.586,17.339)
C4: (-11.688,-44.666,13.586)
O5': (-9.463,-41.992,18.729)
C3': (-10.902,-44.361,19.054)
C1': (-12.777,-44.364,17.652)
O4': (-12.595,-43.043,18.140)
C5': (-10.817,-41.770,19.136)
P: (-8.739,-40.964,17.746)
O2: (-13.356,-46.503,16.014)
C4': (-11.642,-43.043,19.226)
C2': (-12.004,-45.294,18.571)
O2': (-12.853,-45.745,19.603)
N1: (-12.374,-44.457,16.204)
N3: (-12.369,-45.668,14.150)
N4: (-11.355,-44.779,12.299)
C6: (-11.675,-43.439,15.610)
C5: (-11.315,-43.499,14.321)
O3': (-10.370,-44.781,20.287)
OP1: (-8.322,-40.671,10.626)
OP2: (-9.812,-42.745,10.916)
C3': (-9.638,-40.271,15.251)
C1': (-8.963,-38.041,14.643)
C5': (-8.113,-41.287,13.559)
O4': (-8.113,-38.970,14.016)
C8: (-10.088,-37.308,12.485)
O2': (-10.255,-38.369,16.637)
C6: (-10.255,-33.794,12.632)
C5: (-10.118,-35.198,12.711)
C4: (-9.506,-35.698,13.847)
P: (-9.476,-41.345,11.263)
C4': (-8.238,-40.255,14.653)
C2': (-10.092,-38.815,15.312)
C2: (-9.214,-33.672,14.701)
N1: (-9.784,-33.048,13.660)
N3: (-9.032,-34.983,14.884)
N6: (-10.819,-33.169,11.597)
N7: (-10.482,-36.225,11.856)
N9: (-9.486,-37.064,13.689)
O5': (-9.353,-41.277,12.855)
O3': (-9.758,-40.975,16.512)
OP2: (-9.812,-42.745,10.916)
C3': (-9.638,-40.271,15.251)
C1': (-8.963,-38.041,14.643)
C5': (-8.113,-41.287,13.559)
O4': (-8.113,-38.970,14.016)
C8: (-10.088,-37.308,12.485)
O2': (-10.255,-38.369,16.637)
C6: (-10.255,-33.794,12.632)
C5: (-10.118,-35.198,12.711)
C4: (-9.506,-35.698,13.847)
P: (-9.476,-41.345,11.263)
C4': (-8.238,-40.255,14.653)
C2': (-10.092,-38.815,15.312)
C2: (-9.214,-33.672,14.701)
N1: (-9.784,-33.048,13.660)
N3: (-9.032,-34.983,14.884)
N6: (-10.819,-33.169,11.597)
N7: (-10.482,-36.225,11.856)
N9: (-9.486,-37.064,13.689)
O5': (-9.353,-41.277,12.855)
O3': (-9.758,-40.975,16.512)
Image (generated by PyMOL):