Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02534:02533
Extra
PDB:
ATOM 1 O3' A A2533 71.819 125.230 172.751 1.00 73.47 O
ATOM 2 P C A2534 72.796 124.070 173.285 1.00 72.57 P
ATOM 3 OP1 C A2534 71.928 123.046 173.916 1.00 71.68 O
ATOM 4 OP2 C A2534 73.908 124.674 174.059 1.00 72.26 O
ATOM 5 O5' C A2534 73.420 123.443 171.967 1.00 72.16 O
ATOM 6 C5' C A2534 72.630 122.617 171.097 1.00 71.23 C
ATOM 7 C4' C A2534 73.436 122.228 169.885 1.00 70.26 C
ATOM 8 O4' C A2534 73.695 123.402 169.074 1.00 69.64 O
ATOM 9 C3' C A2534 74.821 121.695 170.196 1.00 69.60 C
ATOM 10 O3' C A2534 74.781 120.335 170.592 1.00 71.17 O
ATOM 11 C2' C A2534 75.563 121.943 168.893 1.00 68.09 C
ATOM 12 O2' C A2534 75.258 120.994 167.892 1.00 67.04 O
ATOM 13 C1' C A2534 74.983 123.299 168.488 1.00 67.85 C
ATOM 14 N1 C A2534 75.801 124.437 168.943 1.00 67.11 N
ATOM 15 C2 C A2534 76.978 124.727 168.250 1.00 68.08 C
ATOM 16 O2 C A2534 77.285 124.028 167.271 1.00 68.67 O
ATOM 17 N3 C A2534 77.752 125.760 168.659 1.00 67.69 N
ATOM 18 C4 C A2534 77.386 126.491 169.710 1.00 66.64 C
ATOM 19 N4 C A2534 78.187 127.494 170.079 1.00 66.35 N
ATOM 20 C5 C A2534 76.184 126.224 170.431 1.00 66.90 C
ATOM 21 C6 C A2534 75.430 125.197 170.018 1.00 66.21 C
ATOM 22 P G A2535 75.640 119.863 171.860 1.00 71.97 P
ATOM 23 OP1 G A2535 75.343 118.430 172.130 1.00 70.65 O
ATOM 24 OP2 G A2535 75.435 120.871 172.935 1.00 71.73 O
ATOM 25 O5' G A2535 77.135 119.975 171.334 1.00 72.59 O
TER
ATOM 1 O3' U B2532 74.875 130.572 173.112 1.00 72.22 O
ATOM 2 P A B2533 75.447 129.070 173.148 1.00 72.09 P
ATOM 3 OP1 A B2533 75.577 128.670 174.571 1.00 72.46 O
ATOM 4 OP2 A B2533 76.631 128.978 172.252 1.00 69.93 O
ATOM 5 O5' A B2533 74.255 128.213 172.541 1.00 72.19 O
ATOM 6 C5' A B2533 72.960 128.220 173.164 1.00 72.56 C
ATOM 7 C4' A B2533 71.948 127.590 172.248 1.00 73.97 C
ATOM 8 O4' A B2533 71.883 128.367 171.025 1.00 74.70 O
ATOM 9 C3' A B2533 72.292 126.181 171.795 1.00 74.28 C
ATOM 10 O3' A B2533 71.819 125.230 172.751 1.00 73.47 O
ATOM 11 C2' A B2533 71.558 126.077 170.461 1.00 74.73 C
ATOM 12 O2' A B2533 70.179 125.804 170.617 1.00 75.66 O
ATOM 13 C1' A B2533 71.706 127.501 169.918 1.00 74.30 C
ATOM 14 N9 A B2533 72.829 127.699 169.005 1.00 73.95 N
ATOM 15 C8 A B2533 73.989 128.398 169.239 1.00 74.24 C
ATOM 16 N7 A B2533 74.813 128.414 168.221 1.00 73.74 N
ATOM 17 C5 A B2533 74.155 127.674 167.251 1.00 73.45 C
ATOM 18 C6 A B2533 74.505 127.317 165.941 1.00 72.37 C
ATOM 19 N6 A B2533 75.649 127.675 165.359 1.00 71.69 N
ATOM 20 N1 A B2533 73.628 126.571 165.239 1.00 72.79 N
ATOM 21 C2 A B2533 72.478 126.215 165.824 1.00 74.30 C
ATOM 22 N3 A B2533 72.033 126.488 167.050 1.00 74.51 N
ATOM 23 C4 A B2533 72.931 127.228 167.720 1.00 74.20 C
ATOM 24 P C B2534 72.796 124.070 173.285 1.00 72.57 P
ATOM 25 OP1 C B2534 71.928 123.046 173.916 1.00 71.68 O
ATOM 26 OP2 C B2534 73.908 124.674 174.059 1.00 72.26 O
ATOM 27 O5' C B2534 73.420 123.443 171.967 1.00 72.16 O
TER
ATOM 2 P C A2534 72.796 124.070 173.285 1.00 72.57 P
ATOM 3 OP1 C A2534 71.928 123.046 173.916 1.00 71.68 O
ATOM 4 OP2 C A2534 73.908 124.674 174.059 1.00 72.26 O
ATOM 5 O5' C A2534 73.420 123.443 171.967 1.00 72.16 O
ATOM 6 C5' C A2534 72.630 122.617 171.097 1.00 71.23 C
ATOM 7 C4' C A2534 73.436 122.228 169.885 1.00 70.26 C
ATOM 8 O4' C A2534 73.695 123.402 169.074 1.00 69.64 O
ATOM 9 C3' C A2534 74.821 121.695 170.196 1.00 69.60 C
ATOM 10 O3' C A2534 74.781 120.335 170.592 1.00 71.17 O
ATOM 11 C2' C A2534 75.563 121.943 168.893 1.00 68.09 C
ATOM 12 O2' C A2534 75.258 120.994 167.892 1.00 67.04 O
ATOM 13 C1' C A2534 74.983 123.299 168.488 1.00 67.85 C
ATOM 14 N1 C A2534 75.801 124.437 168.943 1.00 67.11 N
ATOM 15 C2 C A2534 76.978 124.727 168.250 1.00 68.08 C
ATOM 16 O2 C A2534 77.285 124.028 167.271 1.00 68.67 O
ATOM 17 N3 C A2534 77.752 125.760 168.659 1.00 67.69 N
ATOM 18 C4 C A2534 77.386 126.491 169.710 1.00 66.64 C
ATOM 19 N4 C A2534 78.187 127.494 170.079 1.00 66.35 N
ATOM 20 C5 C A2534 76.184 126.224 170.431 1.00 66.90 C
ATOM 21 C6 C A2534 75.430 125.197 170.018 1.00 66.21 C
ATOM 22 P G A2535 75.640 119.863 171.860 1.00 71.97 P
ATOM 23 OP1 G A2535 75.343 118.430 172.130 1.00 70.65 O
ATOM 24 OP2 G A2535 75.435 120.871 172.935 1.00 71.73 O
ATOM 25 O5' G A2535 77.135 119.975 171.334 1.00 72.59 O
TER
ATOM 1 O3' U B2532 74.875 130.572 173.112 1.00 72.22 O
ATOM 2 P A B2533 75.447 129.070 173.148 1.00 72.09 P
ATOM 3 OP1 A B2533 75.577 128.670 174.571 1.00 72.46 O
ATOM 4 OP2 A B2533 76.631 128.978 172.252 1.00 69.93 O
ATOM 5 O5' A B2533 74.255 128.213 172.541 1.00 72.19 O
ATOM 6 C5' A B2533 72.960 128.220 173.164 1.00 72.56 C
ATOM 7 C4' A B2533 71.948 127.590 172.248 1.00 73.97 C
ATOM 8 O4' A B2533 71.883 128.367 171.025 1.00 74.70 O
ATOM 9 C3' A B2533 72.292 126.181 171.795 1.00 74.28 C
ATOM 10 O3' A B2533 71.819 125.230 172.751 1.00 73.47 O
ATOM 11 C2' A B2533 71.558 126.077 170.461 1.00 74.73 C
ATOM 12 O2' A B2533 70.179 125.804 170.617 1.00 75.66 O
ATOM 13 C1' A B2533 71.706 127.501 169.918 1.00 74.30 C
ATOM 14 N9 A B2533 72.829 127.699 169.005 1.00 73.95 N
ATOM 15 C8 A B2533 73.989 128.398 169.239 1.00 74.24 C
ATOM 16 N7 A B2533 74.813 128.414 168.221 1.00 73.74 N
ATOM 17 C5 A B2533 74.155 127.674 167.251 1.00 73.45 C
ATOM 18 C6 A B2533 74.505 127.317 165.941 1.00 72.37 C
ATOM 19 N6 A B2533 75.649 127.675 165.359 1.00 71.69 N
ATOM 20 N1 A B2533 73.628 126.571 165.239 1.00 72.79 N
ATOM 21 C2 A B2533 72.478 126.215 165.824 1.00 74.30 C
ATOM 22 N3 A B2533 72.033 126.488 167.050 1.00 74.51 N
ATOM 23 C4 A B2533 72.931 127.228 167.720 1.00 74.20 C
ATOM 24 P C B2534 72.796 124.070 173.285 1.00 72.57 P
ATOM 25 OP1 C B2534 71.928 123.046 173.916 1.00 71.68 O
ATOM 26 OP2 C B2534 73.908 124.674 174.059 1.00 72.26 O
ATOM 27 O5' C B2534 73.420 123.443 171.967 1.00 72.16 O
TER
Atoms:
C2: (76.978,124.727,168.250)
OP1: (71.928,123.046,173.916)
OP2: (73.908,124.674,174.059)
C4: (77.386,126.491,169.710)
O5': (73.420,123.443,171.967)
C3': (74.821,121.695,170.196)
C1': (74.983,123.299,168.488)
O4': (73.695,123.402,169.074)
C5': (72.630,122.617,171.097)
P: (72.796,124.070,173.285)
O2: (77.285,124.028,167.271)
C4': (73.436,122.228,169.885)
C2': (75.563,121.943,168.893)
O2': (75.258,120.994,167.892)
N1: (75.801,124.437,168.943)
N3: (77.752,125.760,168.659)
N4: (78.187,127.494,170.079)
C6: (75.430,125.197,170.018)
C5: (76.184,126.224,170.431)
O3': (74.781,120.335,170.592)
OP1: (71.928,123.046,173.916)
OP2: (73.908,124.674,174.059)
C4: (77.386,126.491,169.710)
O5': (73.420,123.443,171.967)
C3': (74.821,121.695,170.196)
C1': (74.983,123.299,168.488)
O4': (73.695,123.402,169.074)
C5': (72.630,122.617,171.097)
P: (72.796,124.070,173.285)
O2: (77.285,124.028,167.271)
C4': (73.436,122.228,169.885)
C2': (75.563,121.943,168.893)
O2': (75.258,120.994,167.892)
N1: (75.801,124.437,168.943)
N3: (77.752,125.760,168.659)
N4: (78.187,127.494,170.079)
C6: (75.430,125.197,170.018)
C5: (76.184,126.224,170.431)
O3': (74.781,120.335,170.592)
OP1: (75.577,128.670,174.571)
OP2: (76.631,128.978,172.252)
C3': (72.292,126.181,171.795)
C1': (71.706,127.501,169.918)
C5': (72.960,128.220,173.164)
O4': (71.883,128.367,171.025)
C8: (73.989,128.398,169.239)
O2': (70.179,125.804,170.617)
C6: (74.505,127.317,165.941)
C5: (74.155,127.674,167.251)
C4: (72.931,127.228,167.720)
P: (75.447,129.070,173.148)
C4': (71.948,127.590,172.248)
C2': (71.558,126.077,170.461)
C2: (72.478,126.215,165.824)
N1: (73.628,126.571,165.239)
N3: (72.033,126.488,167.050)
N6: (75.649,127.675,165.359)
N7: (74.813,128.414,168.221)
N9: (72.829,127.699,169.005)
O5': (74.255,128.213,172.541)
O3': (71.819,125.230,172.751)
OP2: (76.631,128.978,172.252)
C3': (72.292,126.181,171.795)
C1': (71.706,127.501,169.918)
C5': (72.960,128.220,173.164)
O4': (71.883,128.367,171.025)
C8: (73.989,128.398,169.239)
O2': (70.179,125.804,170.617)
C6: (74.505,127.317,165.941)
C5: (74.155,127.674,167.251)
C4: (72.931,127.228,167.720)
P: (75.447,129.070,173.148)
C4': (71.948,127.590,172.248)
C2': (71.558,126.077,170.461)
C2: (72.478,126.215,165.824)
N1: (73.628,126.571,165.239)
N3: (72.033,126.488,167.050)
N6: (75.649,127.675,165.359)
N7: (74.813,128.414,168.221)
N9: (72.829,127.699,169.005)
O5': (74.255,128.213,172.541)
O3': (71.819,125.230,172.751)
Image (generated by PyMOL):