Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A556:A555
Extra
PDB:
ATOM 1 O3' A A 555 -52.789 115.141 211.767 1.00 2.04 O
ATOM 2 P C A 556 -53.475 115.225 210.330 1.00 1.88 P
ATOM 3 OP1 C A 556 -53.222 113.912 209.685 1.00 1.88 O
ATOM 4 OP2 C A 556 -52.977 116.472 209.662 1.00 1.88 O
ATOM 5 O5' C A 556 -55.027 115.372 210.668 1.00 1.88 O
ATOM 6 C5' C A 556 -55.801 114.242 211.024 1.00 1.88 C
ATOM 7 C4' C A 556 -57.110 114.644 211.637 1.00 1.88 C
ATOM 8 O4' C A 556 -56.870 115.542 212.739 1.00 1.88 O
ATOM 9 C3' C A 556 -58.054 115.417 210.741 1.00 1.88 C
ATOM 10 O3' C A 556 -58.793 114.594 209.877 1.00 1.88 O
ATOM 11 C2' C A 556 -58.909 116.163 211.743 1.00 1.88 C
ATOM 12 O2' C A 556 -59.848 115.300 212.354 1.00 1.88 O
ATOM 13 C1' C A 556 -57.865 116.537 212.771 1.00 1.88 C
ATOM 14 N1 C A 556 -57.240 117.813 212.453 1.00 2.19 N
ATOM 15 C2 C A 556 -57.940 118.962 212.785 1.00 2.19 C
ATOM 16 O2 C A 556 -59.041 118.832 213.334 1.00 2.19 O
ATOM 17 N3 C A 556 -57.395 120.165 212.511 1.00 2.19 N
ATOM 18 C4 C A 556 -56.199 120.210 211.918 1.00 2.19 C
ATOM 19 N4 C A 556 -55.676 121.402 211.655 1.00 2.19 N
ATOM 20 C5 C A 556 -55.469 119.041 211.564 1.00 2.19 C
ATOM 21 C6 C A 556 -56.026 117.864 211.850 1.00 2.19 C
ATOM 22 P U A 557 -59.124 115.101 208.408 1.00 0.01 P
ATOM 23 OP1 U A 557 -59.804 113.986 207.692 1.00 0.01 O
ATOM 24 OP2 U A 557 -57.877 115.638 207.861 1.00 0.01 O
ATOM 25 O5' U A 557 -60.156 116.275 208.674 1.00 0.01 O
TER
ATOM 1 O3' G B 554 -50.678 120.747 212.789 1.00 0.74 O
ATOM 2 P A B 555 -51.230 120.120 211.433 1.00 2.04 P
ATOM 3 OP1 A B 555 -50.078 119.945 210.533 1.00 2.04 O
ATOM 4 OP2 A B 555 -52.348 120.959 210.993 1.00 2.04 O
ATOM 5 O5' A B 555 -51.762 118.709 211.892 1.00 2.04 O
ATOM 6 C5' A B 555 -50.857 117.696 212.302 1.00 2.04 C
ATOM 7 C4' A B 555 -51.540 116.670 213.168 1.00 2.04 C
ATOM 8 O4' A B 555 -51.797 117.228 214.477 1.00 2.04 O
ATOM 9 C3' A B 555 -52.899 116.195 212.682 1.00 2.04 C
ATOM 10 O3' A B 555 -52.789 115.141 211.767 1.00 2.04 O
ATOM 11 C2' A B 555 -53.577 115.779 213.965 1.00 2.04 C
ATOM 12 O2' A B 555 -53.123 114.507 214.371 1.00 2.04 O
ATOM 13 C1' A B 555 -53.045 116.808 214.940 1.00 2.04 C
ATOM 14 N9 A B 555 -53.916 117.974 215.014 1.00 2.21 N
ATOM 15 C8 A B 555 -53.738 119.230 214.509 1.00 2.21 C
ATOM 16 N7 A B 555 -54.761 119.999 214.766 1.00 2.21 N
ATOM 17 C5 A B 555 -55.636 119.190 215.484 1.00 2.21 C
ATOM 18 C6 A B 555 -56.891 119.398 216.065 1.00 2.21 C
ATOM 19 N6 A B 555 -57.553 120.545 216.036 1.00 2.21 N
ATOM 20 N1 A B 555 -57.477 118.372 216.689 1.00 2.21 N
ATOM 21 C2 A B 555 -56.827 117.209 216.728 1.00 2.21 C
ATOM 22 N3 A B 555 -55.649 116.873 216.233 1.00 2.21 N
ATOM 23 C4 A B 555 -55.116 117.935 215.628 1.00 2.21 C
ATOM 24 P C B 556 -53.475 115.225 210.330 1.00 1.88 P
ATOM 25 OP1 C B 556 -53.222 113.912 209.685 1.00 1.88 O
ATOM 26 OP2 C B 556 -52.977 116.472 209.662 1.00 1.88 O
ATOM 27 O5' C B 556 -55.027 115.372 210.668 1.00 1.88 O
TER
ATOM 2 P C A 556 -53.475 115.225 210.330 1.00 1.88 P
ATOM 3 OP1 C A 556 -53.222 113.912 209.685 1.00 1.88 O
ATOM 4 OP2 C A 556 -52.977 116.472 209.662 1.00 1.88 O
ATOM 5 O5' C A 556 -55.027 115.372 210.668 1.00 1.88 O
ATOM 6 C5' C A 556 -55.801 114.242 211.024 1.00 1.88 C
ATOM 7 C4' C A 556 -57.110 114.644 211.637 1.00 1.88 C
ATOM 8 O4' C A 556 -56.870 115.542 212.739 1.00 1.88 O
ATOM 9 C3' C A 556 -58.054 115.417 210.741 1.00 1.88 C
ATOM 10 O3' C A 556 -58.793 114.594 209.877 1.00 1.88 O
ATOM 11 C2' C A 556 -58.909 116.163 211.743 1.00 1.88 C
ATOM 12 O2' C A 556 -59.848 115.300 212.354 1.00 1.88 O
ATOM 13 C1' C A 556 -57.865 116.537 212.771 1.00 1.88 C
ATOM 14 N1 C A 556 -57.240 117.813 212.453 1.00 2.19 N
ATOM 15 C2 C A 556 -57.940 118.962 212.785 1.00 2.19 C
ATOM 16 O2 C A 556 -59.041 118.832 213.334 1.00 2.19 O
ATOM 17 N3 C A 556 -57.395 120.165 212.511 1.00 2.19 N
ATOM 18 C4 C A 556 -56.199 120.210 211.918 1.00 2.19 C
ATOM 19 N4 C A 556 -55.676 121.402 211.655 1.00 2.19 N
ATOM 20 C5 C A 556 -55.469 119.041 211.564 1.00 2.19 C
ATOM 21 C6 C A 556 -56.026 117.864 211.850 1.00 2.19 C
ATOM 22 P U A 557 -59.124 115.101 208.408 1.00 0.01 P
ATOM 23 OP1 U A 557 -59.804 113.986 207.692 1.00 0.01 O
ATOM 24 OP2 U A 557 -57.877 115.638 207.861 1.00 0.01 O
ATOM 25 O5' U A 557 -60.156 116.275 208.674 1.00 0.01 O
TER
ATOM 1 O3' G B 554 -50.678 120.747 212.789 1.00 0.74 O
ATOM 2 P A B 555 -51.230 120.120 211.433 1.00 2.04 P
ATOM 3 OP1 A B 555 -50.078 119.945 210.533 1.00 2.04 O
ATOM 4 OP2 A B 555 -52.348 120.959 210.993 1.00 2.04 O
ATOM 5 O5' A B 555 -51.762 118.709 211.892 1.00 2.04 O
ATOM 6 C5' A B 555 -50.857 117.696 212.302 1.00 2.04 C
ATOM 7 C4' A B 555 -51.540 116.670 213.168 1.00 2.04 C
ATOM 8 O4' A B 555 -51.797 117.228 214.477 1.00 2.04 O
ATOM 9 C3' A B 555 -52.899 116.195 212.682 1.00 2.04 C
ATOM 10 O3' A B 555 -52.789 115.141 211.767 1.00 2.04 O
ATOM 11 C2' A B 555 -53.577 115.779 213.965 1.00 2.04 C
ATOM 12 O2' A B 555 -53.123 114.507 214.371 1.00 2.04 O
ATOM 13 C1' A B 555 -53.045 116.808 214.940 1.00 2.04 C
ATOM 14 N9 A B 555 -53.916 117.974 215.014 1.00 2.21 N
ATOM 15 C8 A B 555 -53.738 119.230 214.509 1.00 2.21 C
ATOM 16 N7 A B 555 -54.761 119.999 214.766 1.00 2.21 N
ATOM 17 C5 A B 555 -55.636 119.190 215.484 1.00 2.21 C
ATOM 18 C6 A B 555 -56.891 119.398 216.065 1.00 2.21 C
ATOM 19 N6 A B 555 -57.553 120.545 216.036 1.00 2.21 N
ATOM 20 N1 A B 555 -57.477 118.372 216.689 1.00 2.21 N
ATOM 21 C2 A B 555 -56.827 117.209 216.728 1.00 2.21 C
ATOM 22 N3 A B 555 -55.649 116.873 216.233 1.00 2.21 N
ATOM 23 C4 A B 555 -55.116 117.935 215.628 1.00 2.21 C
ATOM 24 P C B 556 -53.475 115.225 210.330 1.00 1.88 P
ATOM 25 OP1 C B 556 -53.222 113.912 209.685 1.00 1.88 O
ATOM 26 OP2 C B 556 -52.977 116.472 209.662 1.00 1.88 O
ATOM 27 O5' C B 556 -55.027 115.372 210.668 1.00 1.88 O
TER
Atoms:
C2: (-57.940,118.962,212.785)
OP1: (-53.222,113.912,209.685)
OP2: (-52.977,116.472,209.662)
C4: (-56.199,120.210,211.918)
O5': (-55.027,115.372,210.668)
C3': (-58.054,115.417,210.741)
C1': (-57.865,116.537,212.771)
O4': (-56.870,115.542,212.739)
C5': (-55.801,114.242,211.024)
P: (-53.475,115.225,210.330)
O2: (-59.041,118.832,213.334)
C4': (-57.110,114.644,211.637)
C2': (-58.909,116.163,211.743)
O2': (-59.848,115.300,212.354)
N1: (-57.240,117.813,212.453)
N3: (-57.395,120.165,212.511)
N4: (-55.676,121.402,211.655)
C6: (-56.026,117.864,211.850)
C5: (-55.469,119.041,211.564)
O3': (-58.793,114.594,209.877)
OP1: (-53.222,113.912,209.685)
OP2: (-52.977,116.472,209.662)
C4: (-56.199,120.210,211.918)
O5': (-55.027,115.372,210.668)
C3': (-58.054,115.417,210.741)
C1': (-57.865,116.537,212.771)
O4': (-56.870,115.542,212.739)
C5': (-55.801,114.242,211.024)
P: (-53.475,115.225,210.330)
O2: (-59.041,118.832,213.334)
C4': (-57.110,114.644,211.637)
C2': (-58.909,116.163,211.743)
O2': (-59.848,115.300,212.354)
N1: (-57.240,117.813,212.453)
N3: (-57.395,120.165,212.511)
N4: (-55.676,121.402,211.655)
C6: (-56.026,117.864,211.850)
C5: (-55.469,119.041,211.564)
O3': (-58.793,114.594,209.877)
OP1: (-50.078,119.945,210.533)
OP2: (-52.348,120.959,210.993)
C3': (-52.899,116.195,212.682)
C1': (-53.045,116.808,214.940)
C5': (-50.857,117.696,212.302)
O4': (-51.797,117.228,214.477)
C8: (-53.738,119.230,214.509)
O2': (-53.123,114.507,214.371)
C6: (-56.891,119.398,216.065)
C5: (-55.636,119.190,215.484)
C4: (-55.116,117.935,215.628)
P: (-51.230,120.120,211.433)
C4': (-51.540,116.670,213.168)
C2': (-53.577,115.779,213.965)
C2: (-56.827,117.209,216.728)
N1: (-57.477,118.372,216.689)
N3: (-55.649,116.873,216.233)
N6: (-57.553,120.545,216.036)
N7: (-54.761,119.999,214.766)
N9: (-53.916,117.974,215.014)
O5': (-51.762,118.709,211.892)
O3': (-52.789,115.141,211.767)
OP2: (-52.348,120.959,210.993)
C3': (-52.899,116.195,212.682)
C1': (-53.045,116.808,214.940)
C5': (-50.857,117.696,212.302)
O4': (-51.797,117.228,214.477)
C8: (-53.738,119.230,214.509)
O2': (-53.123,114.507,214.371)
C6: (-56.891,119.398,216.065)
C5: (-55.636,119.190,215.484)
C4: (-55.116,117.935,215.628)
P: (-51.230,120.120,211.433)
C4': (-51.540,116.670,213.168)
C2': (-53.577,115.779,213.965)
C2: (-56.827,117.209,216.728)
N1: (-57.477,118.372,216.689)
N3: (-55.649,116.873,216.233)
N6: (-57.553,120.545,216.036)
N7: (-54.761,119.999,214.766)
N9: (-53.916,117.974,215.014)
O5': (-51.762,118.709,211.892)
O3': (-52.789,115.141,211.767)
Image (generated by PyMOL):