Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01263:01309
Extra
PDB:
ATOM 1 O3' C A1262 26.242 122.392 60.426 1.00 44.45 O
ATOM 2 P U A1263 25.693 122.331 58.927 1.00 45.91 P
ATOM 3 OP1 U A1263 25.024 123.630 58.678 1.00 47.39 O
ATOM 4 OP2 U A1263 24.942 121.067 58.715 1.00 44.70 O
ATOM 5 O5' U A1263 27.016 122.231 58.054 1.00 44.42 O
ATOM 6 C5' U A1263 27.984 123.294 58.044 1.00 40.69 C
ATOM 7 C4' U A1263 29.097 122.948 57.095 1.00 39.92 C
ATOM 8 O4' U A1263 29.690 121.701 57.528 1.00 39.84 O
ATOM 9 C3' U A1263 28.642 122.674 55.673 1.00 40.04 C
ATOM 10 O3' U A1263 28.563 123.891 54.939 1.00 42.47 O
ATOM 11 C2' U A1263 29.722 121.738 55.152 1.00 40.17 C
ATOM 12 O2' U A1263 30.905 122.399 54.760 1.00 43.32 O
ATOM 13 C1' U A1263 30.038 120.922 56.402 1.00 38.55 C
ATOM 14 N1 U A1263 29.358 119.623 56.494 1.00 37.89 N
ATOM 15 C2 U A1263 29.807 118.613 55.668 1.00 39.93 C
ATOM 16 O2 U A1263 30.689 118.776 54.833 1.00 42.40 O
ATOM 17 N3 U A1263 29.187 117.404 55.847 1.00 39.01 N
ATOM 18 C4 U A1263 28.184 117.114 56.734 1.00 37.99 C
ATOM 19 O4 U A1263 27.787 115.958 56.827 1.00 40.13 O
ATOM 20 C5 U A1263 27.747 118.215 57.525 1.00 36.98 C
ATOM 21 C6 U A1263 28.332 119.402 57.382 1.00 37.25 C
ATOM 22 P C A1264 27.224 124.255 54.123 1.00 43.43 P
ATOM 23 OP1 C A1264 27.234 125.719 53.870 1.00 40.32 O
ATOM 24 OP2 C A1264 26.067 123.649 54.841 1.00 46.09 O
ATOM 25 O5' C A1264 27.416 123.485 52.740 1.00 41.24 O
TER
ATOM 1 O3' G B1308 29.925 108.230 50.404 1.00 41.93 O
ATOM 2 P U B1309 31.163 108.282 51.425 1.00 42.39 P
ATOM 3 OP1 U B1309 32.260 107.503 50.800 1.00 41.33 O
ATOM 4 OP2 U B1309 30.675 107.914 52.769 1.00 43.25 O
ATOM 5 O5' U B1309 31.585 109.817 51.462 1.00 43.26 O
ATOM 6 C5' U B1309 32.124 110.451 50.288 1.00 44.91 C
ATOM 7 C4' U B1309 32.371 111.912 50.550 1.00 47.03 C
ATOM 8 O4' U B1309 31.121 112.587 50.854 1.00 48.06 O
ATOM 9 C3' U B1309 33.259 112.204 51.742 1.00 48.31 C
ATOM 10 O3' U B1309 34.630 112.067 51.362 1.00 49.82 O
ATOM 11 C2' U B1309 32.856 113.633 52.087 1.00 47.09 C
ATOM 12 O2' U B1309 33.436 114.560 51.199 1.00 45.20 O
ATOM 13 C1' U B1309 31.349 113.601 51.817 1.00 46.66 C
ATOM 14 N1 U B1309 30.508 113.308 52.990 1.00 48.66 N
ATOM 15 C2 U B1309 30.054 114.376 53.768 1.00 49.05 C
ATOM 16 O2 U B1309 30.338 115.533 53.544 1.00 51.11 O
ATOM 17 N3 U B1309 29.245 114.029 54.821 1.00 48.65 N
ATOM 18 C4 U B1309 28.843 112.757 55.176 1.00 50.34 C
ATOM 19 O4 U B1309 28.049 112.609 56.114 1.00 49.88 O
ATOM 20 C5 U B1309 29.364 111.710 54.339 1.00 50.85 C
ATOM 21 C6 U B1309 30.160 112.014 53.304 1.00 48.93 C
ATOM 22 P G B1310 35.711 111.477 52.413 1.00 52.29 P
ATOM 23 OP1 G B1310 36.935 111.170 51.637 1.00 51.64 O
ATOM 24 OP2 G B1310 35.095 110.415 53.262 1.00 51.22 O
ATOM 25 O5' G B1310 36.036 112.733 53.331 1.00 50.59 O
TER
ATOM 2 P U A1263 25.693 122.331 58.927 1.00 45.91 P
ATOM 3 OP1 U A1263 25.024 123.630 58.678 1.00 47.39 O
ATOM 4 OP2 U A1263 24.942 121.067 58.715 1.00 44.70 O
ATOM 5 O5' U A1263 27.016 122.231 58.054 1.00 44.42 O
ATOM 6 C5' U A1263 27.984 123.294 58.044 1.00 40.69 C
ATOM 7 C4' U A1263 29.097 122.948 57.095 1.00 39.92 C
ATOM 8 O4' U A1263 29.690 121.701 57.528 1.00 39.84 O
ATOM 9 C3' U A1263 28.642 122.674 55.673 1.00 40.04 C
ATOM 10 O3' U A1263 28.563 123.891 54.939 1.00 42.47 O
ATOM 11 C2' U A1263 29.722 121.738 55.152 1.00 40.17 C
ATOM 12 O2' U A1263 30.905 122.399 54.760 1.00 43.32 O
ATOM 13 C1' U A1263 30.038 120.922 56.402 1.00 38.55 C
ATOM 14 N1 U A1263 29.358 119.623 56.494 1.00 37.89 N
ATOM 15 C2 U A1263 29.807 118.613 55.668 1.00 39.93 C
ATOM 16 O2 U A1263 30.689 118.776 54.833 1.00 42.40 O
ATOM 17 N3 U A1263 29.187 117.404 55.847 1.00 39.01 N
ATOM 18 C4 U A1263 28.184 117.114 56.734 1.00 37.99 C
ATOM 19 O4 U A1263 27.787 115.958 56.827 1.00 40.13 O
ATOM 20 C5 U A1263 27.747 118.215 57.525 1.00 36.98 C
ATOM 21 C6 U A1263 28.332 119.402 57.382 1.00 37.25 C
ATOM 22 P C A1264 27.224 124.255 54.123 1.00 43.43 P
ATOM 23 OP1 C A1264 27.234 125.719 53.870 1.00 40.32 O
ATOM 24 OP2 C A1264 26.067 123.649 54.841 1.00 46.09 O
ATOM 25 O5' C A1264 27.416 123.485 52.740 1.00 41.24 O
TER
ATOM 1 O3' G B1308 29.925 108.230 50.404 1.00 41.93 O
ATOM 2 P U B1309 31.163 108.282 51.425 1.00 42.39 P
ATOM 3 OP1 U B1309 32.260 107.503 50.800 1.00 41.33 O
ATOM 4 OP2 U B1309 30.675 107.914 52.769 1.00 43.25 O
ATOM 5 O5' U B1309 31.585 109.817 51.462 1.00 43.26 O
ATOM 6 C5' U B1309 32.124 110.451 50.288 1.00 44.91 C
ATOM 7 C4' U B1309 32.371 111.912 50.550 1.00 47.03 C
ATOM 8 O4' U B1309 31.121 112.587 50.854 1.00 48.06 O
ATOM 9 C3' U B1309 33.259 112.204 51.742 1.00 48.31 C
ATOM 10 O3' U B1309 34.630 112.067 51.362 1.00 49.82 O
ATOM 11 C2' U B1309 32.856 113.633 52.087 1.00 47.09 C
ATOM 12 O2' U B1309 33.436 114.560 51.199 1.00 45.20 O
ATOM 13 C1' U B1309 31.349 113.601 51.817 1.00 46.66 C
ATOM 14 N1 U B1309 30.508 113.308 52.990 1.00 48.66 N
ATOM 15 C2 U B1309 30.054 114.376 53.768 1.00 49.05 C
ATOM 16 O2 U B1309 30.338 115.533 53.544 1.00 51.11 O
ATOM 17 N3 U B1309 29.245 114.029 54.821 1.00 48.65 N
ATOM 18 C4 U B1309 28.843 112.757 55.176 1.00 50.34 C
ATOM 19 O4 U B1309 28.049 112.609 56.114 1.00 49.88 O
ATOM 20 C5 U B1309 29.364 111.710 54.339 1.00 50.85 C
ATOM 21 C6 U B1309 30.160 112.014 53.304 1.00 48.93 C
ATOM 22 P G B1310 35.711 111.477 52.413 1.00 52.29 P
ATOM 23 OP1 G B1310 36.935 111.170 51.637 1.00 51.64 O
ATOM 24 OP2 G B1310 35.095 110.415 53.262 1.00 51.22 O
ATOM 25 O5' G B1310 36.036 112.733 53.331 1.00 50.59 O
TER
Atoms:
C4: (28.184,117.114,56.734)
N3: (29.187,117.404,55.847)
OP1: (25.024,123.630,58.678)
OP2: (24.942,121.067,58.715)
C2: (29.807,118.613,55.668)
C1': (30.038,120.922,56.402)
C3': (28.642,122.674,55.673)
O5': (27.016,122.231,58.054)
O4': (29.690,121.701,57.528)
C5': (27.984,123.294,58.044)
P: (25.693,122.331,58.927)
C4': (29.097,122.948,57.095)
C2': (29.722,121.738,55.152)
O2': (30.905,122.399,54.760)
N1: (29.358,119.623,56.494)
O4: (27.787,115.958,56.827)
O2: (30.689,118.776,54.833)
C6: (28.332,119.402,57.382)
C5: (27.747,118.215,57.525)
O3': (28.563,123.891,54.939)
N3: (29.187,117.404,55.847)
OP1: (25.024,123.630,58.678)
OP2: (24.942,121.067,58.715)
C2: (29.807,118.613,55.668)
C1': (30.038,120.922,56.402)
C3': (28.642,122.674,55.673)
O5': (27.016,122.231,58.054)
O4': (29.690,121.701,57.528)
C5': (27.984,123.294,58.044)
P: (25.693,122.331,58.927)
C4': (29.097,122.948,57.095)
C2': (29.722,121.738,55.152)
O2': (30.905,122.399,54.760)
N1: (29.358,119.623,56.494)
O4: (27.787,115.958,56.827)
O2: (30.689,118.776,54.833)
C6: (28.332,119.402,57.382)
C5: (27.747,118.215,57.525)
O3': (28.563,123.891,54.939)
C4: (28.843,112.757,55.176)
N3: (29.245,114.029,54.821)
OP1: (32.260,107.503,50.800)
OP2: (30.675,107.914,52.769)
C2: (30.054,114.376,53.768)
C1': (31.349,113.601,51.817)
C3': (33.259,112.204,51.742)
O5': (31.585,109.817,51.462)
O4': (31.121,112.587,50.854)
C5': (32.124,110.451,50.288)
P: (31.163,108.282,51.425)
C4': (32.371,111.912,50.550)
C2': (32.856,113.633,52.087)
O2': (33.436,114.560,51.199)
N1: (30.508,113.308,52.990)
O4: (28.049,112.609,56.114)
O2: (30.338,115.533,53.544)
C6: (30.160,112.014,53.304)
C5: (29.364,111.710,54.339)
O3': (34.630,112.067,51.362)
N3: (29.245,114.029,54.821)
OP1: (32.260,107.503,50.800)
OP2: (30.675,107.914,52.769)
C2: (30.054,114.376,53.768)
C1': (31.349,113.601,51.817)
C3': (33.259,112.204,51.742)
O5': (31.585,109.817,51.462)
O4': (31.121,112.587,50.854)
C5': (32.124,110.451,50.288)
P: (31.163,108.282,51.425)
C4': (32.371,111.912,50.550)
C2': (32.856,113.633,52.087)
O2': (33.436,114.560,51.199)
N1: (30.508,113.308,52.990)
O4: (28.049,112.609,56.114)
O2: (30.338,115.533,53.544)
C6: (30.160,112.014,53.304)
C5: (29.364,111.710,54.339)
O3': (34.630,112.067,51.362)
Image (generated by PyMOL):