Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01263:01309
Extra
PDB:
ATOM 1 O3' C A1262 25.962 121.553 60.270 1.00 29.64 O
ATOM 2 P U A1263 25.315 121.584 58.803 1.00 30.83 P
ATOM 3 OP1 U A1263 24.710 122.922 58.638 1.00 31.43 O
ATOM 4 OP2 U A1263 24.488 120.371 58.592 1.00 30.23 O
ATOM 5 O5' U A1263 26.570 121.478 57.836 1.00 32.08 O
ATOM 6 C5' U A1263 27.611 122.472 57.866 1.00 27.42 C
ATOM 7 C4' U A1263 28.690 122.107 56.885 1.00 26.06 C
ATOM 8 O4' U A1263 29.281 120.853 57.299 1.00 26.02 O
ATOM 9 C3' U A1263 28.223 121.862 55.457 1.00 25.17 C
ATOM 10 O3' U A1263 28.174 123.095 54.740 1.00 27.98 O
ATOM 11 C2' U A1263 29.311 120.942 54.922 1.00 26.21 C
ATOM 12 O2' U A1263 30.491 121.641 54.594 1.00 29.15 O
ATOM 13 C1' U A1263 29.635 120.099 56.157 1.00 26.64 C
ATOM 14 N1 U A1263 28.977 118.784 56.229 1.00 27.23 N
ATOM 15 C2 U A1263 29.410 117.804 55.356 1.00 28.08 C
ATOM 16 O2 U A1263 30.230 118.007 54.477 1.00 30.51 O
ATOM 17 N3 U A1263 28.836 116.577 55.538 1.00 28.98 N
ATOM 18 C4 U A1263 27.883 116.236 56.462 1.00 29.46 C
ATOM 19 O4 U A1263 27.553 115.058 56.571 1.00 34.32 O
ATOM 20 C5 U A1263 27.442 117.312 57.290 1.00 28.31 C
ATOM 21 C6 U A1263 27.990 118.519 57.149 1.00 27.12 C
ATOM 22 P C A1264 26.874 123.488 53.867 1.00 26.80 P
ATOM 23 OP1 C A1264 26.979 124.938 53.592 1.00 26.91 O
ATOM 24 OP2 C A1264 25.656 122.969 54.534 1.00 28.89 O
ATOM 25 O5' C A1264 27.071 122.688 52.501 1.00 24.44 O
TER
ATOM 1 O3' G B1308 29.741 107.417 50.200 1.00 28.31 O
ATOM 2 P U B1309 30.960 107.497 51.235 1.00 29.59 P
ATOM 3 OP1 U B1309 32.035 106.670 50.649 1.00 32.29 O
ATOM 4 OP2 U B1309 30.457 107.186 52.599 1.00 32.32 O
ATOM 5 O5' U B1309 31.396 109.028 51.205 1.00 30.29 O
ATOM 6 C5' U B1309 31.765 109.678 49.975 1.00 31.34 C
ATOM 7 C4' U B1309 31.939 111.157 50.214 1.00 35.37 C
ATOM 8 O4' U B1309 30.657 111.758 50.543 1.00 36.53 O
ATOM 9 C3' U B1309 32.821 111.498 51.403 1.00 39.08 C
ATOM 10 O3' U B1309 34.207 111.407 51.060 1.00 40.87 O
ATOM 11 C2' U B1309 32.339 112.900 51.768 1.00 37.94 C
ATOM 12 O2' U B1309 32.814 113.890 50.886 1.00 39.82 O
ATOM 13 C1' U B1309 30.835 112.774 51.522 1.00 37.04 C
ATOM 14 N1 U B1309 30.047 112.423 52.716 1.00 38.62 N
ATOM 15 C2 U B1309 29.647 113.451 53.577 1.00 39.27 C
ATOM 16 O2 U B1309 29.925 114.623 53.394 1.00 38.96 O
ATOM 17 N3 U B1309 28.904 113.046 54.659 1.00 39.59 N
ATOM 18 C4 U B1309 28.522 111.746 54.969 1.00 41.84 C
ATOM 19 O4 U B1309 27.833 111.536 55.971 1.00 42.83 O
ATOM 20 C5 U B1309 28.975 110.751 54.041 1.00 40.10 C
ATOM 21 C6 U B1309 29.703 111.112 52.978 1.00 39.97 C
ATOM 22 P G B1310 35.214 110.537 51.982 1.00 46.20 P
ATOM 23 OP1 G B1310 36.296 110.082 51.099 1.00 48.56 O
ATOM 24 OP2 G B1310 34.474 109.543 52.800 1.00 45.61 O
ATOM 25 O5' G B1310 35.828 111.609 52.979 1.00 43.68 O
TER
ATOM 2 P U A1263 25.315 121.584 58.803 1.00 30.83 P
ATOM 3 OP1 U A1263 24.710 122.922 58.638 1.00 31.43 O
ATOM 4 OP2 U A1263 24.488 120.371 58.592 1.00 30.23 O
ATOM 5 O5' U A1263 26.570 121.478 57.836 1.00 32.08 O
ATOM 6 C5' U A1263 27.611 122.472 57.866 1.00 27.42 C
ATOM 7 C4' U A1263 28.690 122.107 56.885 1.00 26.06 C
ATOM 8 O4' U A1263 29.281 120.853 57.299 1.00 26.02 O
ATOM 9 C3' U A1263 28.223 121.862 55.457 1.00 25.17 C
ATOM 10 O3' U A1263 28.174 123.095 54.740 1.00 27.98 O
ATOM 11 C2' U A1263 29.311 120.942 54.922 1.00 26.21 C
ATOM 12 O2' U A1263 30.491 121.641 54.594 1.00 29.15 O
ATOM 13 C1' U A1263 29.635 120.099 56.157 1.00 26.64 C
ATOM 14 N1 U A1263 28.977 118.784 56.229 1.00 27.23 N
ATOM 15 C2 U A1263 29.410 117.804 55.356 1.00 28.08 C
ATOM 16 O2 U A1263 30.230 118.007 54.477 1.00 30.51 O
ATOM 17 N3 U A1263 28.836 116.577 55.538 1.00 28.98 N
ATOM 18 C4 U A1263 27.883 116.236 56.462 1.00 29.46 C
ATOM 19 O4 U A1263 27.553 115.058 56.571 1.00 34.32 O
ATOM 20 C5 U A1263 27.442 117.312 57.290 1.00 28.31 C
ATOM 21 C6 U A1263 27.990 118.519 57.149 1.00 27.12 C
ATOM 22 P C A1264 26.874 123.488 53.867 1.00 26.80 P
ATOM 23 OP1 C A1264 26.979 124.938 53.592 1.00 26.91 O
ATOM 24 OP2 C A1264 25.656 122.969 54.534 1.00 28.89 O
ATOM 25 O5' C A1264 27.071 122.688 52.501 1.00 24.44 O
TER
ATOM 1 O3' G B1308 29.741 107.417 50.200 1.00 28.31 O
ATOM 2 P U B1309 30.960 107.497 51.235 1.00 29.59 P
ATOM 3 OP1 U B1309 32.035 106.670 50.649 1.00 32.29 O
ATOM 4 OP2 U B1309 30.457 107.186 52.599 1.00 32.32 O
ATOM 5 O5' U B1309 31.396 109.028 51.205 1.00 30.29 O
ATOM 6 C5' U B1309 31.765 109.678 49.975 1.00 31.34 C
ATOM 7 C4' U B1309 31.939 111.157 50.214 1.00 35.37 C
ATOM 8 O4' U B1309 30.657 111.758 50.543 1.00 36.53 O
ATOM 9 C3' U B1309 32.821 111.498 51.403 1.00 39.08 C
ATOM 10 O3' U B1309 34.207 111.407 51.060 1.00 40.87 O
ATOM 11 C2' U B1309 32.339 112.900 51.768 1.00 37.94 C
ATOM 12 O2' U B1309 32.814 113.890 50.886 1.00 39.82 O
ATOM 13 C1' U B1309 30.835 112.774 51.522 1.00 37.04 C
ATOM 14 N1 U B1309 30.047 112.423 52.716 1.00 38.62 N
ATOM 15 C2 U B1309 29.647 113.451 53.577 1.00 39.27 C
ATOM 16 O2 U B1309 29.925 114.623 53.394 1.00 38.96 O
ATOM 17 N3 U B1309 28.904 113.046 54.659 1.00 39.59 N
ATOM 18 C4 U B1309 28.522 111.746 54.969 1.00 41.84 C
ATOM 19 O4 U B1309 27.833 111.536 55.971 1.00 42.83 O
ATOM 20 C5 U B1309 28.975 110.751 54.041 1.00 40.10 C
ATOM 21 C6 U B1309 29.703 111.112 52.978 1.00 39.97 C
ATOM 22 P G B1310 35.214 110.537 51.982 1.00 46.20 P
ATOM 23 OP1 G B1310 36.296 110.082 51.099 1.00 48.56 O
ATOM 24 OP2 G B1310 34.474 109.543 52.800 1.00 45.61 O
ATOM 25 O5' G B1310 35.828 111.609 52.979 1.00 43.68 O
TER
Atoms:
C4: (27.883,116.236,56.462)
N3: (28.836,116.577,55.538)
OP1: (24.710,122.922,58.638)
OP2: (24.488,120.371,58.592)
C2: (29.410,117.804,55.356)
C1': (29.635,120.099,56.157)
C3': (28.223,121.862,55.457)
O5': (26.570,121.478,57.836)
O4': (29.281,120.853,57.299)
C5': (27.611,122.472,57.866)
P: (25.315,121.584,58.803)
C4': (28.690,122.107,56.885)
C2': (29.311,120.942,54.922)
O2': (30.491,121.641,54.594)
N1: (28.977,118.784,56.229)
O4: (27.553,115.058,56.571)
O2: (30.230,118.007,54.477)
C6: (27.990,118.519,57.149)
C5: (27.442,117.312,57.290)
O3': (28.174,123.095,54.740)
N3: (28.836,116.577,55.538)
OP1: (24.710,122.922,58.638)
OP2: (24.488,120.371,58.592)
C2: (29.410,117.804,55.356)
C1': (29.635,120.099,56.157)
C3': (28.223,121.862,55.457)
O5': (26.570,121.478,57.836)
O4': (29.281,120.853,57.299)
C5': (27.611,122.472,57.866)
P: (25.315,121.584,58.803)
C4': (28.690,122.107,56.885)
C2': (29.311,120.942,54.922)
O2': (30.491,121.641,54.594)
N1: (28.977,118.784,56.229)
O4: (27.553,115.058,56.571)
O2: (30.230,118.007,54.477)
C6: (27.990,118.519,57.149)
C5: (27.442,117.312,57.290)
O3': (28.174,123.095,54.740)
C4: (28.522,111.746,54.969)
N3: (28.904,113.046,54.659)
OP1: (32.035,106.670,50.649)
OP2: (30.457,107.186,52.599)
C2: (29.647,113.451,53.577)
C1': (30.835,112.774,51.522)
C3': (32.821,111.498,51.403)
O5': (31.396,109.028,51.205)
O4': (30.657,111.758,50.543)
C5': (31.765,109.678,49.975)
P: (30.960,107.497,51.235)
C4': (31.939,111.157,50.214)
C2': (32.339,112.900,51.768)
O2': (32.814,113.890,50.886)
N1: (30.047,112.423,52.716)
O4: (27.833,111.536,55.971)
O2: (29.925,114.623,53.394)
C6: (29.703,111.112,52.978)
C5: (28.975,110.751,54.041)
O3': (34.207,111.407,51.060)
N3: (28.904,113.046,54.659)
OP1: (32.035,106.670,50.649)
OP2: (30.457,107.186,52.599)
C2: (29.647,113.451,53.577)
C1': (30.835,112.774,51.522)
C3': (32.821,111.498,51.403)
O5': (31.396,109.028,51.205)
O4': (30.657,111.758,50.543)
C5': (31.765,109.678,49.975)
P: (30.960,107.497,51.235)
C4': (31.939,111.157,50.214)
C2': (32.339,112.900,51.768)
O2': (32.814,113.890,50.886)
N1: (30.047,112.423,52.716)
O4: (27.833,111.536,55.971)
O2: (29.925,114.623,53.394)
C6: (29.703,111.112,52.978)
C5: (28.975,110.751,54.041)
O3': (34.207,111.407,51.060)
Image (generated by PyMOL):