ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2G5K:A18:B4

Extra

PDB:
ATOM 1 O3' G A 17 -20.412 3.962 88.240 1.00111.44 O
ATOM 2 P U A 18 -20.144 3.960 89.831 1.00117.08 P
ATOM 3 OP1 U A 18 -19.948 2.554 90.262 1.00106.51 O
ATOM 4 OP2 U A 18 -21.187 4.786 90.488 1.00 89.04 O
ATOM 5 O5' U A 18 -18.750 4.718 89.993 1.00111.22 O
ATOM 6 C5' U A 18 -17.524 4.086 89.640 1.00 94.93 C
ATOM 7 C4' U A 18 -16.381 4.710 90.402 1.00 95.21 C
ATOM 8 O4' U A 18 -16.186 6.076 89.957 1.00 94.52 O
ATOM 9 C3' U A 18 -16.603 4.856 91.897 1.00105.19 C
ATOM 10 O3' U A 18 -16.311 3.651 92.586 1.00104.46 O
ATOM 11 C2' U A 18 -15.613 5.951 92.260 1.00 98.52 C
ATOM 12 O2' U A 18 -14.301 5.446 92.383 1.00 91.16 O
ATOM 13 C1' U A 18 -15.710 6.864 91.037 1.00 90.64 C
ATOM 14 N1 U A 18 -16.627 7.997 91.220 1.00 83.18 N
ATOM 15 C2 U A 18 -16.173 9.088 91.941 1.00 87.53 C
ATOM 16 O2 U A 18 -15.068 9.129 92.451 1.00100.18 O
ATOM 17 N3 U A 18 -17.064 10.128 92.045 1.00 75.49 N
ATOM 18 C4 U A 18 -18.339 10.180 91.525 1.00 75.48 C
ATOM 19 O4 U A 18 -19.036 11.176 91.727 1.00 76.23 O
ATOM 20 C5 U A 18 -18.739 9.007 90.810 1.00 81.37 C
ATOM 21 C6 U A 18 -17.889 7.981 90.686 1.00 81.96 C
ATOM 22 P C A 19 -17.041 3.344 93.981 1.00116.05 P
ATOM 23 OP1 C A 19 -16.530 2.043 94.494 1.00105.85 O
ATOM 24 OP2 C A 19 -18.498 3.532 93.763 1.00110.98 O
ATOM 25 O5' C A 19 -16.526 4.505 94.943 1.00101.93 O
TER

ATOM 1 O3' G B 3 -17.337 20.225 96.338 1.00 79.69 O
ATOM 2 P U B 4 -16.581 20.242 94.926 1.00 72.96 P
ATOM 3 OP1 U B 4 -15.463 21.208 95.039 1.00 83.35 O
ATOM 4 OP2 U B 4 -17.587 20.417 93.854 1.00 83.57 O
ATOM 5 O5' U B 4 -15.986 18.765 94.812 1.00 81.40 O
ATOM 6 C5' U B 4 -15.045 18.278 95.772 1.00 58.19 C
ATOM 7 C4' U B 4 -14.679 16.842 95.478 1.00 53.13 C
ATOM 8 O4' U B 4 -15.846 15.992 95.619 1.00 75.88 O
ATOM 9 C3' U B 4 -14.183 16.554 94.071 1.00 71.93 C
ATOM 10 O3' U B 4 -12.791 16.831 93.975 1.00 80.12 O
ATOM 11 C2' U B 4 -14.444 15.055 93.934 1.00 62.24 C
ATOM 12 O2' U B 4 -13.408 14.263 94.468 1.00 81.22 O
ATOM 13 C1' U B 4 -15.723 14.870 94.759 1.00 61.76 C
ATOM 14 N1 U B 4 -16.925 14.788 93.917 1.00 73.17 N
ATOM 15 C2 U B 4 -17.158 13.594 93.252 1.00 72.20 C
ATOM 16 O2 U B 4 -16.447 12.606 93.388 1.00 66.91 O
ATOM 17 N3 U B 4 -18.251 13.599 92.421 1.00 40.04 N
ATOM 18 C4 U B 4 -19.118 14.650 92.190 1.00 76.90 C
ATOM 19 O4 U B 4 -19.964 14.551 91.292 1.00 81.13 O
ATOM 20 C5 U B 4 -18.834 15.835 92.950 1.00 66.32 C
ATOM 21 C6 U B 4 -17.777 15.863 93.767 1.00 67.96 C
ATOM 22 P C B 5 -12.258 17.924 92.924 1.00 86.04 P
ATOM 23 OP1 C B 5 -11.809 19.120 93.685 1.00 82.42 O
ATOM 24 OP2 C B 5 -13.238 18.082 91.820 1.00 82.56 O
ATOM 25 O5' C B 5 -10.960 17.241 92.329 1.00 67.87 O
TER

Atoms:
C4: (-18.339,10.180,91.525)
N3: (-17.064,10.128,92.045)
OP1: (-19.948,2.554,90.262)
OP2: (-21.187,4.786,90.488)
C2: (-16.173,9.088,91.941)
C1': (-15.710,6.864,91.037)
C3': (-16.603,4.856,91.897)
O5': (-18.750,4.718,89.993)
O4': (-16.186,6.076,89.957)
C5': (-17.524,4.086,89.640)
P: (-20.144,3.960,89.831)
C4': (-16.381,4.710,90.402)
C2': (-15.613,5.951,92.260)
O2': (-14.301,5.446,92.383)
N1: (-16.627,7.997,91.220)
O4: (-19.036,11.176,91.727)
O2: (-15.068,9.129,92.451)
C6: (-17.889,7.981,90.686)
C5: (-18.739,9.007,90.810)
O3': (-16.311,3.651,92.586)
C4: (-19.118,14.650,92.190)
N3: (-18.251,13.599,92.421)
OP1: (-15.463,21.208,95.039)
OP2: (-17.587,20.417,93.854)
C2: (-17.158,13.594,93.252)
C1': (-15.723,14.870,94.759)
C3': (-14.183,16.554,94.071)
O5': (-15.986,18.765,94.812)
O4': (-15.846,15.992,95.619)
C5': (-15.045,18.278,95.772)
P: (-16.581,20.242,94.926)
C4': (-14.679,16.842,95.478)
C2': (-14.444,15.055,93.934)
O2': (-13.408,14.263,94.468)
N1: (-16.925,14.788,93.917)
O4: (-19.964,14.551,91.292)
O2: (-16.447,12.606,93.388)
C6: (-17.777,15.863,93.767)
C5: (-18.834,15.835,92.950)
O3': (-12.791,16.831,93.975)
Image (generated by PyMOL):
PyMOL image
show in jmol