Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21526:21549
Extra
PDB:
ATOM 1 O3' A A1525 -53.353 -70.597 52.887 1.00 86.19 O
ATOM 2 P U A1526 -53.542 -70.733 51.303 1.00 78.18 P
ATOM 3 OP1 U A1526 -53.839 -69.386 50.770 1.00 77.66 O
ATOM 4 OP2 U A1526 -54.531 -71.803 51.094 1.00 78.65 O
ATOM 5 O5' U A1526 -52.114 -71.227 50.804 1.00 78.20 O
ATOM 6 C5' U A1526 -50.922 -70.574 51.205 1.00 77.91 C
ATOM 7 C4' U A1526 -49.735 -71.511 51.156 1.00 78.19 C
ATOM 8 O4' U A1526 -49.902 -72.577 52.128 1.00 78.72 O
ATOM 9 C3' U A1526 -49.506 -72.257 49.846 1.00 78.34 C
ATOM 10 O3' U A1526 -48.896 -71.469 48.853 1.00 77.93 O
ATOM 11 C2' U A1526 -48.660 -73.439 50.285 1.00 78.81 C
ATOM 12 O2' U A1526 -47.311 -73.045 50.489 1.00 78.64 O
ATOM 13 C1' U A1526 -49.283 -73.760 51.647 1.00 79.11 C
ATOM 14 N1 U A1526 -50.308 -74.807 51.537 1.00 79.57 N
ATOM 15 C2 U A1526 -49.919 -76.115 51.304 1.00 80.06 C
ATOM 16 O2 U A1526 -48.768 -76.456 51.200 1.00 80.15 O
ATOM 17 N3 U A1526 -50.941 -77.025 51.205 1.00 80.48 N
ATOM 18 C4 U A1526 -52.296 -76.769 51.305 1.00 80.46 C
ATOM 19 O4 U A1526 -53.121 -77.691 51.186 1.00 80.89 O
ATOM 20 C5 U A1526 -52.612 -75.392 51.542 1.00 79.95 C
ATOM 21 C6 U A1526 -51.644 -74.477 51.647 1.00 79.52 C
ATOM 22 P A A1527 -49.492 -71.454 47.368 1.00 79.93 P
ATOM 23 OP1 A A1527 -48.759 -70.407 46.619 1.00 79.47 O
ATOM 24 OP2 A A1527 -50.965 -71.331 47.492 1.00 79.98 O
ATOM 25 O5' A A1527 -49.103 -72.901 46.818 1.00 80.42 O
TER
ATOM 1 O3' U B1548 -50.857 -87.844 49.702 1.00103.62 O
ATOM 2 P U B1549 -50.508 -87.382 51.215 1.00 90.47 P
ATOM 3 OP1 U B1549 -49.486 -88.323 51.714 1.00 91.00 O
ATOM 4 OP2 U B1549 -51.772 -87.259 51.962 1.00 90.58 O
ATOM 5 O5' U B1549 -49.864 -85.949 51.008 1.00 89.73 O
ATOM 6 C5' U B1549 -48.602 -85.806 50.381 1.00 89.54 C
ATOM 7 C4' U B1549 -48.179 -84.365 50.330 1.00 88.85 C
ATOM 8 O4' U B1549 -49.123 -83.592 49.545 1.00 88.39 O
ATOM 9 C3' U B1549 -48.150 -83.640 51.655 1.00 88.71 C
ATOM 10 O3' U B1549 -47.010 -83.951 52.422 1.00 88.98 O
ATOM 11 C2' U B1549 -48.222 -82.186 51.231 1.00 87.97 C
ATOM 12 O2' U B1549 -46.956 -81.757 50.752 1.00 87.70 O
ATOM 13 C1' U B1549 -49.187 -82.270 50.043 1.00 87.86 C
ATOM 14 N1 U B1549 -50.591 -81.979 50.431 1.00 87.82 N
ATOM 15 C2 U B1549 -51.032 -80.679 50.535 1.00 87.28 C
ATOM 16 O2 U B1549 -50.347 -79.723 50.326 1.00 86.81 O
ATOM 17 N3 U B1549 -52.324 -80.494 50.901 1.00 87.32 N
ATOM 18 C4 U B1549 -53.249 -81.482 51.155 1.00 87.84 C
ATOM 19 O4 U B1549 -54.401 -81.173 51.472 1.00 87.84 O
ATOM 20 C5 U B1549 -52.742 -82.815 51.009 1.00 88.39 C
ATOM 21 C6 U B1549 -51.466 -83.012 50.666 1.00 88.36 C
ATOM 22 P C B1550 -47.192 -84.446 53.930 1.00 98.71 P
ATOM 23 OP1 C B1550 -45.859 -84.362 54.585 1.00 98.80 O
ATOM 24 OP2 C B1550 -47.873 -85.759 53.878 1.00 99.34 O
ATOM 25 O5' C B1550 -48.174 -83.341 54.534 1.00 98.29 O
TER
ATOM 2 P U A1526 -53.542 -70.733 51.303 1.00 78.18 P
ATOM 3 OP1 U A1526 -53.839 -69.386 50.770 1.00 77.66 O
ATOM 4 OP2 U A1526 -54.531 -71.803 51.094 1.00 78.65 O
ATOM 5 O5' U A1526 -52.114 -71.227 50.804 1.00 78.20 O
ATOM 6 C5' U A1526 -50.922 -70.574 51.205 1.00 77.91 C
ATOM 7 C4' U A1526 -49.735 -71.511 51.156 1.00 78.19 C
ATOM 8 O4' U A1526 -49.902 -72.577 52.128 1.00 78.72 O
ATOM 9 C3' U A1526 -49.506 -72.257 49.846 1.00 78.34 C
ATOM 10 O3' U A1526 -48.896 -71.469 48.853 1.00 77.93 O
ATOM 11 C2' U A1526 -48.660 -73.439 50.285 1.00 78.81 C
ATOM 12 O2' U A1526 -47.311 -73.045 50.489 1.00 78.64 O
ATOM 13 C1' U A1526 -49.283 -73.760 51.647 1.00 79.11 C
ATOM 14 N1 U A1526 -50.308 -74.807 51.537 1.00 79.57 N
ATOM 15 C2 U A1526 -49.919 -76.115 51.304 1.00 80.06 C
ATOM 16 O2 U A1526 -48.768 -76.456 51.200 1.00 80.15 O
ATOM 17 N3 U A1526 -50.941 -77.025 51.205 1.00 80.48 N
ATOM 18 C4 U A1526 -52.296 -76.769 51.305 1.00 80.46 C
ATOM 19 O4 U A1526 -53.121 -77.691 51.186 1.00 80.89 O
ATOM 20 C5 U A1526 -52.612 -75.392 51.542 1.00 79.95 C
ATOM 21 C6 U A1526 -51.644 -74.477 51.647 1.00 79.52 C
ATOM 22 P A A1527 -49.492 -71.454 47.368 1.00 79.93 P
ATOM 23 OP1 A A1527 -48.759 -70.407 46.619 1.00 79.47 O
ATOM 24 OP2 A A1527 -50.965 -71.331 47.492 1.00 79.98 O
ATOM 25 O5' A A1527 -49.103 -72.901 46.818 1.00 80.42 O
TER
ATOM 1 O3' U B1548 -50.857 -87.844 49.702 1.00103.62 O
ATOM 2 P U B1549 -50.508 -87.382 51.215 1.00 90.47 P
ATOM 3 OP1 U B1549 -49.486 -88.323 51.714 1.00 91.00 O
ATOM 4 OP2 U B1549 -51.772 -87.259 51.962 1.00 90.58 O
ATOM 5 O5' U B1549 -49.864 -85.949 51.008 1.00 89.73 O
ATOM 6 C5' U B1549 -48.602 -85.806 50.381 1.00 89.54 C
ATOM 7 C4' U B1549 -48.179 -84.365 50.330 1.00 88.85 C
ATOM 8 O4' U B1549 -49.123 -83.592 49.545 1.00 88.39 O
ATOM 9 C3' U B1549 -48.150 -83.640 51.655 1.00 88.71 C
ATOM 10 O3' U B1549 -47.010 -83.951 52.422 1.00 88.98 O
ATOM 11 C2' U B1549 -48.222 -82.186 51.231 1.00 87.97 C
ATOM 12 O2' U B1549 -46.956 -81.757 50.752 1.00 87.70 O
ATOM 13 C1' U B1549 -49.187 -82.270 50.043 1.00 87.86 C
ATOM 14 N1 U B1549 -50.591 -81.979 50.431 1.00 87.82 N
ATOM 15 C2 U B1549 -51.032 -80.679 50.535 1.00 87.28 C
ATOM 16 O2 U B1549 -50.347 -79.723 50.326 1.00 86.81 O
ATOM 17 N3 U B1549 -52.324 -80.494 50.901 1.00 87.32 N
ATOM 18 C4 U B1549 -53.249 -81.482 51.155 1.00 87.84 C
ATOM 19 O4 U B1549 -54.401 -81.173 51.472 1.00 87.84 O
ATOM 20 C5 U B1549 -52.742 -82.815 51.009 1.00 88.39 C
ATOM 21 C6 U B1549 -51.466 -83.012 50.666 1.00 88.36 C
ATOM 22 P C B1550 -47.192 -84.446 53.930 1.00 98.71 P
ATOM 23 OP1 C B1550 -45.859 -84.362 54.585 1.00 98.80 O
ATOM 24 OP2 C B1550 -47.873 -85.759 53.878 1.00 99.34 O
ATOM 25 O5' C B1550 -48.174 -83.341 54.534 1.00 98.29 O
TER
Atoms:
C4: (-52.296,-76.769,51.305)
N3: (-50.941,-77.025,51.205)
OP1: (-53.839,-69.386,50.770)
OP2: (-54.531,-71.803,51.094)
C2: (-49.919,-76.115,51.304)
C1': (-49.283,-73.760,51.647)
C3': (-49.506,-72.257,49.846)
O5': (-52.114,-71.227,50.804)
O4': (-49.902,-72.577,52.128)
C5': (-50.922,-70.574,51.205)
P: (-53.542,-70.733,51.303)
C4': (-49.735,-71.511,51.156)
C2': (-48.660,-73.439,50.285)
O2': (-47.311,-73.045,50.489)
N1: (-50.308,-74.807,51.537)
O4: (-53.121,-77.691,51.186)
O2: (-48.768,-76.456,51.200)
C6: (-51.644,-74.477,51.647)
C5: (-52.612,-75.392,51.542)
O3': (-48.896,-71.469,48.853)
N3: (-50.941,-77.025,51.205)
OP1: (-53.839,-69.386,50.770)
OP2: (-54.531,-71.803,51.094)
C2: (-49.919,-76.115,51.304)
C1': (-49.283,-73.760,51.647)
C3': (-49.506,-72.257,49.846)
O5': (-52.114,-71.227,50.804)
O4': (-49.902,-72.577,52.128)
C5': (-50.922,-70.574,51.205)
P: (-53.542,-70.733,51.303)
C4': (-49.735,-71.511,51.156)
C2': (-48.660,-73.439,50.285)
O2': (-47.311,-73.045,50.489)
N1: (-50.308,-74.807,51.537)
O4: (-53.121,-77.691,51.186)
O2: (-48.768,-76.456,51.200)
C6: (-51.644,-74.477,51.647)
C5: (-52.612,-75.392,51.542)
O3': (-48.896,-71.469,48.853)
C4: (-53.249,-81.482,51.155)
N3: (-52.324,-80.494,50.901)
OP1: (-49.486,-88.323,51.714)
OP2: (-51.772,-87.259,51.962)
C2: (-51.032,-80.679,50.535)
C1': (-49.187,-82.270,50.043)
C3': (-48.150,-83.640,51.655)
O5': (-49.864,-85.949,51.008)
O4': (-49.123,-83.592,49.545)
C5': (-48.602,-85.806,50.381)
P: (-50.508,-87.382,51.215)
C4': (-48.179,-84.365,50.330)
C2': (-48.222,-82.186,51.231)
O2': (-46.956,-81.757,50.752)
N1: (-50.591,-81.979,50.431)
O4: (-54.401,-81.173,51.472)
O2: (-50.347,-79.723,50.326)
C6: (-51.466,-83.012,50.666)
C5: (-52.742,-82.815,51.009)
O3': (-47.010,-83.951,52.422)
N3: (-52.324,-80.494,50.901)
OP1: (-49.486,-88.323,51.714)
OP2: (-51.772,-87.259,51.962)
C2: (-51.032,-80.679,50.535)
C1': (-49.187,-82.270,50.043)
C3': (-48.150,-83.640,51.655)
O5': (-49.864,-85.949,51.008)
O4': (-49.123,-83.592,49.545)
C5': (-48.602,-85.806,50.381)
P: (-50.508,-87.382,51.215)
C4': (-48.179,-84.365,50.330)
C2': (-48.222,-82.186,51.231)
O2': (-46.956,-81.757,50.752)
N1: (-50.591,-81.979,50.431)
O4: (-54.401,-81.173,51.472)
O2: (-50.347,-79.723,50.326)
C6: (-51.466,-83.012,50.666)
C5: (-52.742,-82.815,51.009)
O3': (-47.010,-83.951,52.422)
Image (generated by PyMOL):