Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NVI:E3:E19
Extra
PDB:
ATOM 1 O3' C A 2 -4.597 -17.923 -3.585 1.00 85.00 O
ATOM 2 P U A 3 -3.625 -16.855 -4.286 1.00 87.34 P
ATOM 3 OP1 U A 3 -3.207 -17.432 -5.588 1.00 87.73 O
ATOM 4 OP2 U A 3 -2.586 -16.517 -3.283 1.00 81.63 O
ATOM 5 O5' U A 3 -4.569 -15.582 -4.525 1.00 86.08 O
ATOM 6 C5' U A 3 -5.913 -15.715 -4.991 1.00 80.83 C
ATOM 7 C4' U A 3 -6.708 -14.439 -4.772 1.00 79.69 C
ATOM 8 O4' U A 3 -6.914 -14.220 -3.353 1.00 77.20 O
ATOM 9 C3' U A 3 -6.062 -13.148 -5.273 1.00 81.60 C
ATOM 10 O3' U A 3 -6.319 -12.906 -6.645 1.00 82.17 O
ATOM 11 C2' U A 3 -6.654 -12.073 -4.364 1.00 84.34 C
ATOM 12 O2' U A 3 -7.897 -11.612 -4.870 1.00 86.17 O
ATOM 13 C1' U A 3 -6.903 -12.836 -3.063 1.00 75.68 C
ATOM 14 N1 U A 3 -5.858 -12.568 -2.051 1.00 69.33 N
ATOM 15 C2 U A 3 -5.933 -11.382 -1.374 1.00 66.30 C
ATOM 16 O2 U A 3 -6.796 -10.561 -1.581 1.00 69.29 O
ATOM 17 N3 U A 3 -4.956 -11.178 -0.445 1.00 67.47 N
ATOM 18 C4 U A 3 -3.934 -12.030 -0.112 1.00 70.97 C
ATOM 19 O4 U A 3 -3.136 -11.684 0.767 1.00 67.65 O
ATOM 20 C5 U A 3 -3.917 -13.258 -0.854 1.00 69.88 C
ATOM 21 C6 U A 3 -4.855 -13.475 -1.782 1.00 72.67 C
ATOM 22 P G A 4 -5.112 -12.689 -7.683 1.00 97.22 P
ATOM 23 OP1 G A 4 -5.649 -12.993 -9.034 1.00 99.76 O
ATOM 24 OP2 G A 4 -3.950 -13.472 -7.183 1.00 87.52 O
ATOM 25 O5' G A 4 -4.810 -11.132 -7.561 1.00 90.60 O
TER
ATOM 1 O3' A B 18 -6.034 -2.067 3.873 1.00 78.44 O
ATOM 2 P U B 19 -7.297 -2.927 4.423 1.00 78.65 P
ATOM 3 OP1 U B 19 -8.157 -2.001 5.211 1.00 87.03 O
ATOM 4 OP2 U B 19 -6.751 -4.117 5.097 1.00 85.08 O
ATOM 5 O5' U B 19 -8.062 -3.352 3.092 1.00 70.80 O
ATOM 6 C5' U B 19 -9.120 -2.550 2.586 1.00 74.99 C
ATOM 7 C4' U B 19 -9.816 -3.205 1.417 1.00 76.57 C
ATOM 8 O4' U B 19 -8.835 -3.623 0.435 1.00 78.80 O
ATOM 9 C3' U B 19 -10.596 -4.471 1.725 1.00 79.82 C
ATOM 10 O3' U B 19 -11.888 -4.209 2.255 1.00 84.87 O
ATOM 11 C2' U B 19 -10.621 -5.186 0.379 1.00 77.74 C
ATOM 12 O2' U B 19 -11.615 -4.628 -0.456 1.00 80.72 O
ATOM 13 C1' U B 19 -9.258 -4.809 -0.199 1.00 73.52 C
ATOM 14 N1 U B 19 -8.226 -5.856 0.023 1.00 72.27 N
ATOM 15 C2 U B 19 -8.319 -7.076 -0.630 1.00 80.24 C
ATOM 16 O2 U B 19 -9.258 -7.349 -1.377 1.00 84.75 O
ATOM 17 N3 U B 19 -7.284 -7.961 -0.358 1.00 73.55 N
ATOM 18 C4 U B 19 -6.199 -7.746 0.480 1.00 71.30 C
ATOM 19 O4 U B 19 -5.329 -8.612 0.651 1.00 71.39 O
ATOM 20 C5 U B 19 -6.185 -6.470 1.104 1.00 69.22 C
ATOM 21 C6 U B 19 -7.159 -5.597 0.853 1.00 72.49 C
ATOM 22 P G B 20 -12.506 -5.149 3.409 1.00 84.39 P
ATOM 23 OP1 G B 20 -13.667 -4.436 3.979 1.00 83.37 O
ATOM 24 OP2 G B 20 -11.393 -5.531 4.312 1.00 85.99 O
ATOM 25 O5' G B 20 -13.002 -6.422 2.600 1.00 85.73 O
TER
ATOM 2 P U A 3 -3.625 -16.855 -4.286 1.00 87.34 P
ATOM 3 OP1 U A 3 -3.207 -17.432 -5.588 1.00 87.73 O
ATOM 4 OP2 U A 3 -2.586 -16.517 -3.283 1.00 81.63 O
ATOM 5 O5' U A 3 -4.569 -15.582 -4.525 1.00 86.08 O
ATOM 6 C5' U A 3 -5.913 -15.715 -4.991 1.00 80.83 C
ATOM 7 C4' U A 3 -6.708 -14.439 -4.772 1.00 79.69 C
ATOM 8 O4' U A 3 -6.914 -14.220 -3.353 1.00 77.20 O
ATOM 9 C3' U A 3 -6.062 -13.148 -5.273 1.00 81.60 C
ATOM 10 O3' U A 3 -6.319 -12.906 -6.645 1.00 82.17 O
ATOM 11 C2' U A 3 -6.654 -12.073 -4.364 1.00 84.34 C
ATOM 12 O2' U A 3 -7.897 -11.612 -4.870 1.00 86.17 O
ATOM 13 C1' U A 3 -6.903 -12.836 -3.063 1.00 75.68 C
ATOM 14 N1 U A 3 -5.858 -12.568 -2.051 1.00 69.33 N
ATOM 15 C2 U A 3 -5.933 -11.382 -1.374 1.00 66.30 C
ATOM 16 O2 U A 3 -6.796 -10.561 -1.581 1.00 69.29 O
ATOM 17 N3 U A 3 -4.956 -11.178 -0.445 1.00 67.47 N
ATOM 18 C4 U A 3 -3.934 -12.030 -0.112 1.00 70.97 C
ATOM 19 O4 U A 3 -3.136 -11.684 0.767 1.00 67.65 O
ATOM 20 C5 U A 3 -3.917 -13.258 -0.854 1.00 69.88 C
ATOM 21 C6 U A 3 -4.855 -13.475 -1.782 1.00 72.67 C
ATOM 22 P G A 4 -5.112 -12.689 -7.683 1.00 97.22 P
ATOM 23 OP1 G A 4 -5.649 -12.993 -9.034 1.00 99.76 O
ATOM 24 OP2 G A 4 -3.950 -13.472 -7.183 1.00 87.52 O
ATOM 25 O5' G A 4 -4.810 -11.132 -7.561 1.00 90.60 O
TER
ATOM 1 O3' A B 18 -6.034 -2.067 3.873 1.00 78.44 O
ATOM 2 P U B 19 -7.297 -2.927 4.423 1.00 78.65 P
ATOM 3 OP1 U B 19 -8.157 -2.001 5.211 1.00 87.03 O
ATOM 4 OP2 U B 19 -6.751 -4.117 5.097 1.00 85.08 O
ATOM 5 O5' U B 19 -8.062 -3.352 3.092 1.00 70.80 O
ATOM 6 C5' U B 19 -9.120 -2.550 2.586 1.00 74.99 C
ATOM 7 C4' U B 19 -9.816 -3.205 1.417 1.00 76.57 C
ATOM 8 O4' U B 19 -8.835 -3.623 0.435 1.00 78.80 O
ATOM 9 C3' U B 19 -10.596 -4.471 1.725 1.00 79.82 C
ATOM 10 O3' U B 19 -11.888 -4.209 2.255 1.00 84.87 O
ATOM 11 C2' U B 19 -10.621 -5.186 0.379 1.00 77.74 C
ATOM 12 O2' U B 19 -11.615 -4.628 -0.456 1.00 80.72 O
ATOM 13 C1' U B 19 -9.258 -4.809 -0.199 1.00 73.52 C
ATOM 14 N1 U B 19 -8.226 -5.856 0.023 1.00 72.27 N
ATOM 15 C2 U B 19 -8.319 -7.076 -0.630 1.00 80.24 C
ATOM 16 O2 U B 19 -9.258 -7.349 -1.377 1.00 84.75 O
ATOM 17 N3 U B 19 -7.284 -7.961 -0.358 1.00 73.55 N
ATOM 18 C4 U B 19 -6.199 -7.746 0.480 1.00 71.30 C
ATOM 19 O4 U B 19 -5.329 -8.612 0.651 1.00 71.39 O
ATOM 20 C5 U B 19 -6.185 -6.470 1.104 1.00 69.22 C
ATOM 21 C6 U B 19 -7.159 -5.597 0.853 1.00 72.49 C
ATOM 22 P G B 20 -12.506 -5.149 3.409 1.00 84.39 P
ATOM 23 OP1 G B 20 -13.667 -4.436 3.979 1.00 83.37 O
ATOM 24 OP2 G B 20 -11.393 -5.531 4.312 1.00 85.99 O
ATOM 25 O5' G B 20 -13.002 -6.422 2.600 1.00 85.73 O
TER
Atoms:
C4: (-3.934,-12.030,-0.112)
N3: (-4.956,-11.178,-0.445)
OP1: (-3.207,-17.432,-5.588)
OP2: (-2.586,-16.517,-3.283)
C2: (-5.933,-11.382,-1.374)
C1': (-6.903,-12.836,-3.063)
C3': (-6.062,-13.148,-5.273)
O5': (-4.569,-15.582,-4.525)
O4': (-6.914,-14.220,-3.353)
C5': (-5.913,-15.715,-4.991)
P: (-3.625,-16.855,-4.286)
C4': (-6.708,-14.439,-4.772)
C2': (-6.654,-12.073,-4.364)
O2': (-7.897,-11.612,-4.870)
N1: (-5.858,-12.568,-2.051)
O4: (-3.136,-11.684,0.767)
O2: (-6.796,-10.561,-1.581)
C6: (-4.855,-13.475,-1.782)
C5: (-3.917,-13.258,-0.854)
O3': (-6.319,-12.906,-6.645)
N3: (-4.956,-11.178,-0.445)
OP1: (-3.207,-17.432,-5.588)
OP2: (-2.586,-16.517,-3.283)
C2: (-5.933,-11.382,-1.374)
C1': (-6.903,-12.836,-3.063)
C3': (-6.062,-13.148,-5.273)
O5': (-4.569,-15.582,-4.525)
O4': (-6.914,-14.220,-3.353)
C5': (-5.913,-15.715,-4.991)
P: (-3.625,-16.855,-4.286)
C4': (-6.708,-14.439,-4.772)
C2': (-6.654,-12.073,-4.364)
O2': (-7.897,-11.612,-4.870)
N1: (-5.858,-12.568,-2.051)
O4: (-3.136,-11.684,0.767)
O2: (-6.796,-10.561,-1.581)
C6: (-4.855,-13.475,-1.782)
C5: (-3.917,-13.258,-0.854)
O3': (-6.319,-12.906,-6.645)
C4: (-6.199,-7.746,0.480)
N3: (-7.284,-7.961,-0.358)
OP1: (-8.157,-2.001,5.211)
OP2: (-6.751,-4.117,5.097)
C2: (-8.319,-7.076,-0.630)
C1': (-9.258,-4.809,-0.199)
C3': (-10.596,-4.471,1.725)
O5': (-8.062,-3.352,3.092)
O4': (-8.835,-3.623,0.435)
C5': (-9.120,-2.550,2.586)
P: (-7.297,-2.927,4.423)
C4': (-9.816,-3.205,1.417)
C2': (-10.621,-5.186,0.379)
O2': (-11.615,-4.628,-0.456)
N1: (-8.226,-5.856,0.023)
O4: (-5.329,-8.612,0.651)
O2: (-9.258,-7.349,-1.377)
C6: (-7.159,-5.597,0.853)
C5: (-6.185,-6.470,1.104)
O3': (-11.888,-4.209,2.255)
N3: (-7.284,-7.961,-0.358)
OP1: (-8.157,-2.001,5.211)
OP2: (-6.751,-4.117,5.097)
C2: (-8.319,-7.076,-0.630)
C1': (-9.258,-4.809,-0.199)
C3': (-10.596,-4.471,1.725)
O5': (-8.062,-3.352,3.092)
O4': (-8.835,-3.623,0.435)
C5': (-9.120,-2.550,2.586)
P: (-7.297,-2.927,4.423)
C4': (-9.816,-3.205,1.417)
C2': (-10.621,-5.186,0.379)
O2': (-11.615,-4.628,-0.456)
N1: (-8.226,-5.856,0.023)
O4: (-5.329,-8.612,0.651)
O2: (-9.258,-7.349,-1.377)
C6: (-7.159,-5.597,0.853)
C5: (-6.185,-6.470,1.104)
O3': (-11.888,-4.209,2.255)
Image (generated by PyMOL):