Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
205D:A5:B6
Extra
PDB:
ATOM 1 O3' U A 4 3.538 -0.063 6.891 1.00 5.81 O
ATOM 2 P U A 5 3.054 -1.494 6.373 1.00 7.59 P
ATOM 3 OP1 U A 5 2.751 -2.780 7.033 1.00 2.00 O
ATOM 4 OP2 U A 5 4.148 -1.476 5.243 1.00 10.68 O
ATOM 5 O5' U A 5 1.591 -1.077 5.610 1.00 3.57 O
ATOM 6 C5' U A 5 0.432 -1.258 6.386 1.00 7.16 C
ATOM 7 C4' U A 5 -0.565 -0.477 5.823 1.00 14.57 C
ATOM 8 O4' U A 5 0.083 0.613 5.120 1.00 15.26 O
ATOM 9 C3' U A 5 -1.351 -1.165 4.750 1.00 17.72 C
ATOM 10 O3' U A 5 -2.314 -2.167 5.098 1.00 8.54 O
ATOM 11 C2' U A 5 -1.879 -0.050 3.866 1.00 12.10 C
ATOM 12 O2' U A 5 -3.200 0.294 4.255 1.00 16.05 O
ATOM 13 C1' U A 5 -0.932 1.086 4.175 1.00 15.26 C
ATOM 14 N1 U A 5 -0.368 1.439 2.861 1.00 15.23 N
ATOM 15 C2 U A 5 -1.142 2.274 2.080 1.00 14.61 C
ATOM 16 O2 U A 5 -2.142 2.796 2.480 1.00 11.48 O
ATOM 17 N3 U A 5 -0.625 2.471 0.836 1.00 15.63 N
ATOM 18 C4 U A 5 0.502 1.897 0.306 1.00 10.12 C
ATOM 19 O4 U A 5 0.860 2.161 -0.839 1.00 13.45 O
ATOM 20 C5 U A 5 1.232 1.023 1.167 1.00 10.68 C
ATOM 21 C6 U A 5 0.751 0.820 2.411 1.00 12.37 C
ATOM 22 P U A 6 -2.200 -3.480 4.146 1.00 30.87 P
ATOM 23 OP1 U A 6 -2.851 -4.287 5.193 1.00 31.13 O
ATOM 24 OP2 U A 6 -1.138 -4.126 3.299 1.00 24.90 O
ATOM 25 O5' U A 6 -3.378 -2.742 3.181 1.00 23.55 O
TER
ATOM 1 O3' U B 5 -4.942 5.774 -7.465 1.00 41.41 O
ATOM 2 P U B 6 -4.718 7.108 -6.522 1.00 48.18 P
ATOM 3 OP1 U B 6 -5.573 7.264 -7.719 1.00 46.72 O
ATOM 4 OP2 U B 6 -3.993 8.286 -5.969 1.00 43.75 O
ATOM 5 O5' U B 6 -5.532 6.281 -5.326 1.00 41.53 O
ATOM 6 C5' U B 6 -6.958 6.062 -5.333 1.00 42.84 C
ATOM 7 C4' U B 6 -7.531 5.525 -3.990 1.00 44.77 C
ATOM 8 O4' U B 6 -7.027 4.208 -3.645 1.00 45.95 O
ATOM 9 C3' U B 6 -7.136 6.388 -2.815 1.00 45.01 C
ATOM 10 O3' U B 6 -7.814 7.658 -2.660 1.00 51.01 O
ATOM 11 C2' U B 6 -7.222 5.455 -1.642 1.00 41.94 C
ATOM 12 O2' U B 6 -8.567 5.300 -1.196 1.00 41.10 O
ATOM 13 C1' U B 6 -6.673 4.157 -2.228 1.00 42.99 C
ATOM 14 N1 U B 6 -5.172 4.028 -2.009 1.00 42.48 N
ATOM 15 C2 U B 6 -4.690 3.302 -0.921 1.00 43.35 C
ATOM 16 O2 U B 6 -5.430 2.760 -0.109 1.00 42.22 O
ATOM 17 N3 U B 6 -3.299 3.233 -0.785 1.00 44.66 N
ATOM 18 C4 U B 6 -2.369 3.824 -1.642 1.00 43.50 C
ATOM 19 O4 U B 6 -1.162 3.718 -1.452 1.00 38.83 O
ATOM 20 C5 U B 6 -2.962 4.550 -2.727 1.00 44.32 C
ATOM 21 C6 U B 6 -4.299 4.620 -2.879 1.00 42.93 C
ATOM 22 P G B 7 -6.949 8.965 -2.117 1.00 58.57 P
ATOM 23 OP1 G B 7 -7.739 10.224 -2.095 1.00 55.45 O
ATOM 24 OP2 G B 7 -5.568 8.992 -2.684 1.00 60.09 O
ATOM 25 O5' G B 7 -6.839 8.444 -0.609 1.00 54.77 O
TER
ATOM 2 P U A 5 3.054 -1.494 6.373 1.00 7.59 P
ATOM 3 OP1 U A 5 2.751 -2.780 7.033 1.00 2.00 O
ATOM 4 OP2 U A 5 4.148 -1.476 5.243 1.00 10.68 O
ATOM 5 O5' U A 5 1.591 -1.077 5.610 1.00 3.57 O
ATOM 6 C5' U A 5 0.432 -1.258 6.386 1.00 7.16 C
ATOM 7 C4' U A 5 -0.565 -0.477 5.823 1.00 14.57 C
ATOM 8 O4' U A 5 0.083 0.613 5.120 1.00 15.26 O
ATOM 9 C3' U A 5 -1.351 -1.165 4.750 1.00 17.72 C
ATOM 10 O3' U A 5 -2.314 -2.167 5.098 1.00 8.54 O
ATOM 11 C2' U A 5 -1.879 -0.050 3.866 1.00 12.10 C
ATOM 12 O2' U A 5 -3.200 0.294 4.255 1.00 16.05 O
ATOM 13 C1' U A 5 -0.932 1.086 4.175 1.00 15.26 C
ATOM 14 N1 U A 5 -0.368 1.439 2.861 1.00 15.23 N
ATOM 15 C2 U A 5 -1.142 2.274 2.080 1.00 14.61 C
ATOM 16 O2 U A 5 -2.142 2.796 2.480 1.00 11.48 O
ATOM 17 N3 U A 5 -0.625 2.471 0.836 1.00 15.63 N
ATOM 18 C4 U A 5 0.502 1.897 0.306 1.00 10.12 C
ATOM 19 O4 U A 5 0.860 2.161 -0.839 1.00 13.45 O
ATOM 20 C5 U A 5 1.232 1.023 1.167 1.00 10.68 C
ATOM 21 C6 U A 5 0.751 0.820 2.411 1.00 12.37 C
ATOM 22 P U A 6 -2.200 -3.480 4.146 1.00 30.87 P
ATOM 23 OP1 U A 6 -2.851 -4.287 5.193 1.00 31.13 O
ATOM 24 OP2 U A 6 -1.138 -4.126 3.299 1.00 24.90 O
ATOM 25 O5' U A 6 -3.378 -2.742 3.181 1.00 23.55 O
TER
ATOM 1 O3' U B 5 -4.942 5.774 -7.465 1.00 41.41 O
ATOM 2 P U B 6 -4.718 7.108 -6.522 1.00 48.18 P
ATOM 3 OP1 U B 6 -5.573 7.264 -7.719 1.00 46.72 O
ATOM 4 OP2 U B 6 -3.993 8.286 -5.969 1.00 43.75 O
ATOM 5 O5' U B 6 -5.532 6.281 -5.326 1.00 41.53 O
ATOM 6 C5' U B 6 -6.958 6.062 -5.333 1.00 42.84 C
ATOM 7 C4' U B 6 -7.531 5.525 -3.990 1.00 44.77 C
ATOM 8 O4' U B 6 -7.027 4.208 -3.645 1.00 45.95 O
ATOM 9 C3' U B 6 -7.136 6.388 -2.815 1.00 45.01 C
ATOM 10 O3' U B 6 -7.814 7.658 -2.660 1.00 51.01 O
ATOM 11 C2' U B 6 -7.222 5.455 -1.642 1.00 41.94 C
ATOM 12 O2' U B 6 -8.567 5.300 -1.196 1.00 41.10 O
ATOM 13 C1' U B 6 -6.673 4.157 -2.228 1.00 42.99 C
ATOM 14 N1 U B 6 -5.172 4.028 -2.009 1.00 42.48 N
ATOM 15 C2 U B 6 -4.690 3.302 -0.921 1.00 43.35 C
ATOM 16 O2 U B 6 -5.430 2.760 -0.109 1.00 42.22 O
ATOM 17 N3 U B 6 -3.299 3.233 -0.785 1.00 44.66 N
ATOM 18 C4 U B 6 -2.369 3.824 -1.642 1.00 43.50 C
ATOM 19 O4 U B 6 -1.162 3.718 -1.452 1.00 38.83 O
ATOM 20 C5 U B 6 -2.962 4.550 -2.727 1.00 44.32 C
ATOM 21 C6 U B 6 -4.299 4.620 -2.879 1.00 42.93 C
ATOM 22 P G B 7 -6.949 8.965 -2.117 1.00 58.57 P
ATOM 23 OP1 G B 7 -7.739 10.224 -2.095 1.00 55.45 O
ATOM 24 OP2 G B 7 -5.568 8.992 -2.684 1.00 60.09 O
ATOM 25 O5' G B 7 -6.839 8.444 -0.609 1.00 54.77 O
TER
Atoms:
C4: (0.502,1.897,0.306)
N3: (-0.625,2.471,0.836)
OP1: (2.751,-2.780,7.033)
OP2: (4.148,-1.476,5.243)
C2: (-1.142,2.274,2.080)
C1': (-0.932,1.086,4.175)
C3': (-1.351,-1.165,4.750)
O5': (1.591,-1.077,5.610)
O4': (0.083,0.613,5.120)
C5': (0.432,-1.258,6.386)
P: (3.054,-1.494,6.373)
C4': (-0.565,-0.477,5.823)
C2': (-1.879,-0.050,3.866)
O2': (-3.200,0.294,4.255)
N1: (-0.368,1.439,2.861)
O4: (0.860,2.161,-0.839)
O2: (-2.142,2.796,2.480)
C6: (0.751,0.820,2.411)
C5: (1.232,1.023,1.167)
O3': (-2.314,-2.167,5.098)
N3: (-0.625,2.471,0.836)
OP1: (2.751,-2.780,7.033)
OP2: (4.148,-1.476,5.243)
C2: (-1.142,2.274,2.080)
C1': (-0.932,1.086,4.175)
C3': (-1.351,-1.165,4.750)
O5': (1.591,-1.077,5.610)
O4': (0.083,0.613,5.120)
C5': (0.432,-1.258,6.386)
P: (3.054,-1.494,6.373)
C4': (-0.565,-0.477,5.823)
C2': (-1.879,-0.050,3.866)
O2': (-3.200,0.294,4.255)
N1: (-0.368,1.439,2.861)
O4: (0.860,2.161,-0.839)
O2: (-2.142,2.796,2.480)
C6: (0.751,0.820,2.411)
C5: (1.232,1.023,1.167)
O3': (-2.314,-2.167,5.098)
C4: (-2.369,3.824,-1.642)
N3: (-3.299,3.233,-0.785)
OP1: (-5.573,7.264,-7.719)
OP2: (-3.993,8.286,-5.969)
C2: (-4.690,3.302,-0.921)
C1': (-6.673,4.157,-2.228)
C3': (-7.136,6.388,-2.815)
O5': (-5.532,6.281,-5.326)
O4': (-7.027,4.208,-3.645)
C5': (-6.958,6.062,-5.333)
P: (-4.718,7.108,-6.522)
C4': (-7.531,5.525,-3.990)
C2': (-7.222,5.455,-1.642)
O2': (-8.567,5.300,-1.196)
N1: (-5.172,4.028,-2.009)
O4: (-1.162,3.718,-1.452)
O2: (-5.430,2.760,-0.109)
C6: (-4.299,4.620,-2.879)
C5: (-2.962,4.550,-2.727)
O3': (-7.814,7.658,-2.660)
N3: (-3.299,3.233,-0.785)
OP1: (-5.573,7.264,-7.719)
OP2: (-3.993,8.286,-5.969)
C2: (-4.690,3.302,-0.921)
C1': (-6.673,4.157,-2.228)
C3': (-7.136,6.388,-2.815)
O5': (-5.532,6.281,-5.326)
O4': (-7.027,4.208,-3.645)
C5': (-6.958,6.062,-5.333)
P: (-4.718,7.108,-6.522)
C4': (-7.531,5.525,-3.990)
C2': (-7.222,5.455,-1.642)
O2': (-8.567,5.300,-1.196)
N1: (-5.172,4.028,-2.009)
O4: (-1.162,3.718,-1.452)
O2: (-5.430,2.760,-0.109)
C6: (-4.299,4.620,-2.879)
C5: (-2.962,4.550,-2.727)
O3': (-7.814,7.658,-2.660)
Image (generated by PyMOL):