Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1T0D:C10:D5
Extra
PDB:
ATOM 1 O3' G A 9 18.608 8.607 6.297 1.00 13.96 O
ATOM 2 P U A 10 18.077 10.041 6.791 1.00 18.15 P
ATOM 3 OP1 U A 10 18.343 10.993 5.689 1.00 18.66 O
ATOM 4 OP2 U A 10 18.588 10.349 8.144 1.00 19.92 O
ATOM 5 O5' U A 10 16.496 9.823 6.951 1.00 19.41 O
ATOM 6 C5' U A 10 15.716 9.264 5.896 1.00 16.79 C
ATOM 7 C4' U A 10 14.313 8.936 6.385 1.00 18.85 C
ATOM 8 O4' U A 10 14.341 7.847 7.347 1.00 19.73 O
ATOM 9 C3' U A 10 13.601 10.056 7.117 1.00 18.01 C
ATOM 10 O3' U A 10 13.007 10.925 6.180 1.00 19.54 O
ATOM 11 C2' U A 10 12.563 9.297 7.937 1.00 19.20 C
ATOM 12 O2' U A 10 11.434 8.878 7.192 1.00 14.09 O
ATOM 13 C1' U A 10 13.359 8.064 8.352 1.00 16.16 C
ATOM 14 N1 U A 10 14.043 8.218 9.642 1.00 15.40 N
ATOM 15 C2 U A 10 13.302 8.023 10.812 1.00 18.01 C
ATOM 16 O2 U A 10 12.091 7.783 10.818 1.00 17.68 O
ATOM 17 N3 U A 10 14.024 8.131 11.976 1.00 13.24 N
ATOM 18 C4 U A 10 15.378 8.420 12.097 1.00 17.51 C
ATOM 19 O4 U A 10 15.895 8.472 13.215 1.00 13.33 O
ATOM 20 C5 U A 10 16.057 8.630 10.853 1.00 16.73 C
ATOM 21 C6 U A 10 15.384 8.528 9.698 1.00 17.32 C
ATOM 22 P C A 11 13.123 12.502 6.384 1.00 21.06 P
ATOM 23 OP1 C A 11 12.793 13.101 5.070 1.00 22.39 O
ATOM 24 OP2 C A 11 14.417 12.813 7.035 1.00 23.40 O
ATOM 25 O5' C A 11 11.948 12.846 7.404 1.00 23.01 O
TER
ATOM 1 O3' G B 4 8.495 6.267 21.203 1.00 27.56 O
ATOM 2 P U B 5 8.634 5.047 20.166 1.00 26.90 P
ATOM 3 OP1 U B 5 7.709 3.972 20.595 1.00 26.73 O
ATOM 4 OP2 U B 5 10.070 4.737 19.978 1.00 25.89 O
ATOM 5 O5' U B 5 8.100 5.654 18.794 1.00 27.08 O
ATOM 6 C5' U B 5 6.731 6.012 18.632 1.00 25.92 C
ATOM 7 C4' U B 5 6.434 6.309 17.179 1.00 23.17 C
ATOM 8 O4' U B 5 7.248 7.430 16.735 1.00 22.57 O
ATOM 9 C3' U B 5 6.787 5.214 16.188 1.00 22.40 C
ATOM 10 O3' U B 5 5.782 4.215 16.116 1.00 20.15 O
ATOM 11 C2' U B 5 6.865 5.992 14.886 1.00 22.74 C
ATOM 12 O2' U B 5 5.579 6.307 14.390 1.00 24.81 O
ATOM 13 C1' U B 5 7.546 7.275 15.353 1.00 22.94 C
ATOM 14 N1 U B 5 9.006 7.272 15.161 1.00 21.66 N
ATOM 15 C2 U B 5 9.472 7.547 13.879 1.00 22.07 C
ATOM 16 O2 U B 5 8.723 7.693 12.928 1.00 21.45 O
ATOM 17 N3 U B 5 10.841 7.632 13.754 1.00 19.83 N
ATOM 18 C4 U B 5 11.779 7.447 14.759 1.00 22.23 C
ATOM 19 O4 U B 5 12.977 7.654 14.520 1.00 20.79 O
ATOM 20 C5 U B 5 11.219 7.106 16.044 1.00 21.01 C
ATOM 21 C6 U B 5 9.883 7.034 16.195 1.00 20.39 C
ATOM 22 P C B 6 6.211 2.677 16.002 1.00 19.24 P
ATOM 23 OP1 C B 6 4.984 1.882 16.196 1.00 22.44 O
ATOM 24 OP2 C B 6 7.379 2.449 16.900 1.00 22.11 O
ATOM 25 O5' C B 6 6.731 2.517 14.504 1.00 22.39 O
TER
ATOM 2 P U A 10 18.077 10.041 6.791 1.00 18.15 P
ATOM 3 OP1 U A 10 18.343 10.993 5.689 1.00 18.66 O
ATOM 4 OP2 U A 10 18.588 10.349 8.144 1.00 19.92 O
ATOM 5 O5' U A 10 16.496 9.823 6.951 1.00 19.41 O
ATOM 6 C5' U A 10 15.716 9.264 5.896 1.00 16.79 C
ATOM 7 C4' U A 10 14.313 8.936 6.385 1.00 18.85 C
ATOM 8 O4' U A 10 14.341 7.847 7.347 1.00 19.73 O
ATOM 9 C3' U A 10 13.601 10.056 7.117 1.00 18.01 C
ATOM 10 O3' U A 10 13.007 10.925 6.180 1.00 19.54 O
ATOM 11 C2' U A 10 12.563 9.297 7.937 1.00 19.20 C
ATOM 12 O2' U A 10 11.434 8.878 7.192 1.00 14.09 O
ATOM 13 C1' U A 10 13.359 8.064 8.352 1.00 16.16 C
ATOM 14 N1 U A 10 14.043 8.218 9.642 1.00 15.40 N
ATOM 15 C2 U A 10 13.302 8.023 10.812 1.00 18.01 C
ATOM 16 O2 U A 10 12.091 7.783 10.818 1.00 17.68 O
ATOM 17 N3 U A 10 14.024 8.131 11.976 1.00 13.24 N
ATOM 18 C4 U A 10 15.378 8.420 12.097 1.00 17.51 C
ATOM 19 O4 U A 10 15.895 8.472 13.215 1.00 13.33 O
ATOM 20 C5 U A 10 16.057 8.630 10.853 1.00 16.73 C
ATOM 21 C6 U A 10 15.384 8.528 9.698 1.00 17.32 C
ATOM 22 P C A 11 13.123 12.502 6.384 1.00 21.06 P
ATOM 23 OP1 C A 11 12.793 13.101 5.070 1.00 22.39 O
ATOM 24 OP2 C A 11 14.417 12.813 7.035 1.00 23.40 O
ATOM 25 O5' C A 11 11.948 12.846 7.404 1.00 23.01 O
TER
ATOM 1 O3' G B 4 8.495 6.267 21.203 1.00 27.56 O
ATOM 2 P U B 5 8.634 5.047 20.166 1.00 26.90 P
ATOM 3 OP1 U B 5 7.709 3.972 20.595 1.00 26.73 O
ATOM 4 OP2 U B 5 10.070 4.737 19.978 1.00 25.89 O
ATOM 5 O5' U B 5 8.100 5.654 18.794 1.00 27.08 O
ATOM 6 C5' U B 5 6.731 6.012 18.632 1.00 25.92 C
ATOM 7 C4' U B 5 6.434 6.309 17.179 1.00 23.17 C
ATOM 8 O4' U B 5 7.248 7.430 16.735 1.00 22.57 O
ATOM 9 C3' U B 5 6.787 5.214 16.188 1.00 22.40 C
ATOM 10 O3' U B 5 5.782 4.215 16.116 1.00 20.15 O
ATOM 11 C2' U B 5 6.865 5.992 14.886 1.00 22.74 C
ATOM 12 O2' U B 5 5.579 6.307 14.390 1.00 24.81 O
ATOM 13 C1' U B 5 7.546 7.275 15.353 1.00 22.94 C
ATOM 14 N1 U B 5 9.006 7.272 15.161 1.00 21.66 N
ATOM 15 C2 U B 5 9.472 7.547 13.879 1.00 22.07 C
ATOM 16 O2 U B 5 8.723 7.693 12.928 1.00 21.45 O
ATOM 17 N3 U B 5 10.841 7.632 13.754 1.00 19.83 N
ATOM 18 C4 U B 5 11.779 7.447 14.759 1.00 22.23 C
ATOM 19 O4 U B 5 12.977 7.654 14.520 1.00 20.79 O
ATOM 20 C5 U B 5 11.219 7.106 16.044 1.00 21.01 C
ATOM 21 C6 U B 5 9.883 7.034 16.195 1.00 20.39 C
ATOM 22 P C B 6 6.211 2.677 16.002 1.00 19.24 P
ATOM 23 OP1 C B 6 4.984 1.882 16.196 1.00 22.44 O
ATOM 24 OP2 C B 6 7.379 2.449 16.900 1.00 22.11 O
ATOM 25 O5' C B 6 6.731 2.517 14.504 1.00 22.39 O
TER
Atoms:
C4: (15.378,8.420,12.097)
N3: (14.024,8.131,11.976)
OP1: (18.343,10.993,5.689)
OP2: (18.588,10.349,8.144)
C2: (13.302,8.023,10.812)
C1': (13.359,8.064,8.352)
C3': (13.601,10.056,7.117)
O5': (16.496,9.823,6.951)
O4': (14.341,7.847,7.347)
C5': (15.716,9.264,5.896)
P: (18.077,10.041,6.791)
C4': (14.313,8.936,6.385)
C2': (12.563,9.297,7.937)
O2': (11.434,8.878,7.192)
N1: (14.043,8.218,9.642)
O4: (15.895,8.472,13.215)
O2: (12.091,7.783,10.818)
C6: (15.384,8.528,9.698)
C5: (16.057,8.630,10.853)
O3': (13.007,10.925,6.180)
N3: (14.024,8.131,11.976)
OP1: (18.343,10.993,5.689)
OP2: (18.588,10.349,8.144)
C2: (13.302,8.023,10.812)
C1': (13.359,8.064,8.352)
C3': (13.601,10.056,7.117)
O5': (16.496,9.823,6.951)
O4': (14.341,7.847,7.347)
C5': (15.716,9.264,5.896)
P: (18.077,10.041,6.791)
C4': (14.313,8.936,6.385)
C2': (12.563,9.297,7.937)
O2': (11.434,8.878,7.192)
N1: (14.043,8.218,9.642)
O4: (15.895,8.472,13.215)
O2: (12.091,7.783,10.818)
C6: (15.384,8.528,9.698)
C5: (16.057,8.630,10.853)
O3': (13.007,10.925,6.180)
C4: (11.779,7.447,14.759)
N3: (10.841,7.632,13.754)
OP1: (7.709,3.972,20.595)
OP2: (10.070,4.737,19.978)
C2: (9.472,7.547,13.879)
C1': (7.546,7.275,15.353)
C3': (6.787,5.214,16.188)
O5': (8.100,5.654,18.794)
O4': (7.248,7.430,16.735)
C5': (6.731,6.012,18.632)
P: (8.634,5.047,20.166)
C4': (6.434,6.309,17.179)
C2': (6.865,5.992,14.886)
O2': (5.579,6.307,14.390)
N1: (9.006,7.272,15.161)
O4: (12.977,7.654,14.520)
O2: (8.723,7.693,12.928)
C6: (9.883,7.034,16.195)
C5: (11.219,7.106,16.044)
O3': (5.782,4.215,16.116)
N3: (10.841,7.632,13.754)
OP1: (7.709,3.972,20.595)
OP2: (10.070,4.737,19.978)
C2: (9.472,7.547,13.879)
C1': (7.546,7.275,15.353)
C3': (6.787,5.214,16.188)
O5': (8.100,5.654,18.794)
O4': (7.248,7.430,16.735)
C5': (6.731,6.012,18.632)
P: (8.634,5.047,20.166)
C4': (6.434,6.309,17.179)
C2': (6.865,5.992,14.886)
O2': (5.579,6.307,14.390)
N1: (9.006,7.272,15.161)
O4: (12.977,7.654,14.520)
O2: (8.723,7.693,12.928)
C6: (9.883,7.034,16.195)
C5: (11.219,7.106,16.044)
O3': (5.782,4.215,16.116)
Image (generated by PyMOL):