Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12869:12867
Extra
PDB:
ATOM 1 O3' G A2868 20.343 15.332 -16.763 1.00 79.94 O
ATOM 2 P C A2869 19.682 16.325 -15.684 1.00 79.01 P
ATOM 3 OP1 C A2869 19.426 17.635 -16.362 1.00 79.59 O
ATOM 4 OP2 C A2869 20.559 16.304 -14.476 1.00 78.23 O
ATOM 5 O5' C A2869 18.308 15.608 -15.339 1.00 78.97 O
ATOM 6 C5' C A2869 17.175 15.695 -16.180 1.00 79.63 C
ATOM 7 C4' C A2869 16.038 14.945 -15.562 1.00 79.42 C
ATOM 8 O4' C A2869 16.416 13.544 -15.430 1.00 79.10 O
ATOM 9 C3' C A2869 15.704 15.361 -14.137 1.00 78.80 C
ATOM 10 O3' C A2869 14.878 16.504 -14.050 1.00 79.07 O
ATOM 11 C2' C A2869 15.099 14.103 -13.535 1.00 78.44 C
ATOM 12 O2' C A2869 13.759 13.918 -13.956 1.00 78.90 O
ATOM 13 C1' C A2869 15.973 13.036 -14.177 1.00 78.47 C
ATOM 14 N1 C A2869 17.153 12.750 -13.326 1.00 77.79 N
ATOM 15 C2 C A2869 16.890 12.020 -12.168 1.00 77.16 C
ATOM 16 O2 C A2869 15.708 11.646 -11.988 1.00 77.25 O
ATOM 17 N3 C A2869 17.926 11.743 -11.319 1.00 76.52 N
ATOM 18 C4 C A2869 19.160 12.196 -11.575 1.00 76.48 C
ATOM 19 N4 C A2869 20.153 11.918 -10.724 1.00 75.86 N
ATOM 20 C5 C A2869 19.427 12.969 -12.741 1.00 77.11 C
ATOM 21 C6 C A2869 18.412 13.225 -13.571 1.00 77.74 C
ATOM 22 P C A2870 15.349 17.767 -13.164 1.00 74.04 P
ATOM 23 OP1 C A2870 14.324 18.853 -13.341 1.00 74.49 O
ATOM 24 OP2 C A2870 16.779 18.039 -13.529 1.00 73.99 O
ATOM 25 O5' C A2870 15.268 17.211 -11.697 1.00 73.23 O
TER
ATOM 1 O3' A B2866 28.016 9.756 -9.819 1.00 54.64 O
ATOM 2 P C B2867 27.257 8.562 -10.597 1.00 62.56 P
ATOM 3 OP1 C B2867 26.414 7.838 -9.619 1.00 62.14 O
ATOM 4 OP2 C B2867 28.288 7.804 -11.341 1.00 62.72 O
ATOM 5 O5' C B2867 26.325 9.329 -11.613 1.00 63.25 O
ATOM 6 C5' C B2867 25.551 8.608 -12.558 1.00 63.77 C
ATOM 7 C4' C B2867 24.092 8.903 -12.409 1.00 63.93 C
ATOM 8 O4' C B2867 23.643 8.476 -11.097 1.00 63.31 O
ATOM 9 C3' C B2867 23.699 10.383 -12.538 1.00 64.19 C
ATOM 10 O3' C B2867 22.489 10.498 -13.299 1.00 64.77 O
ATOM 11 C2' C B2867 23.410 10.783 -11.099 1.00 63.56 C
ATOM 12 O2' C B2867 22.505 11.865 -10.970 1.00 63.75 O
ATOM 13 C1' C B2867 22.823 9.480 -10.567 1.00 63.26 C
ATOM 14 N1 C B2867 22.812 9.354 -9.107 1.00 62.55 N
ATOM 15 C2 C B2867 21.561 9.436 -8.520 1.00 62.47 C
ATOM 16 O2 C B2867 20.586 9.603 -9.268 1.00 63.00 O
ATOM 17 N3 C B2867 21.460 9.328 -7.180 1.00 61.84 N
ATOM 18 C4 C B2867 22.540 9.146 -6.432 1.00 61.31 C
ATOM 19 N4 C B2867 22.384 9.041 -5.115 1.00 60.71 N
ATOM 20 C5 C B2867 23.825 9.061 -7.020 1.00 61.38 C
ATOM 21 C6 C B2867 23.923 9.168 -8.350 1.00 62.00 C
ATOM 22 P G B2868 22.468 10.139 -14.859 1.00 78.00 P
ATOM 23 OP1 G B2868 21.495 9.037 -15.029 1.00 78.14 O
ATOM 24 OP2 G B2868 23.879 9.923 -15.295 1.00 77.98 O
ATOM 25 O5' G B2868 21.909 11.476 -15.502 1.00 78.56 O
TER
ATOM 2 P C A2869 19.682 16.325 -15.684 1.00 79.01 P
ATOM 3 OP1 C A2869 19.426 17.635 -16.362 1.00 79.59 O
ATOM 4 OP2 C A2869 20.559 16.304 -14.476 1.00 78.23 O
ATOM 5 O5' C A2869 18.308 15.608 -15.339 1.00 78.97 O
ATOM 6 C5' C A2869 17.175 15.695 -16.180 1.00 79.63 C
ATOM 7 C4' C A2869 16.038 14.945 -15.562 1.00 79.42 C
ATOM 8 O4' C A2869 16.416 13.544 -15.430 1.00 79.10 O
ATOM 9 C3' C A2869 15.704 15.361 -14.137 1.00 78.80 C
ATOM 10 O3' C A2869 14.878 16.504 -14.050 1.00 79.07 O
ATOM 11 C2' C A2869 15.099 14.103 -13.535 1.00 78.44 C
ATOM 12 O2' C A2869 13.759 13.918 -13.956 1.00 78.90 O
ATOM 13 C1' C A2869 15.973 13.036 -14.177 1.00 78.47 C
ATOM 14 N1 C A2869 17.153 12.750 -13.326 1.00 77.79 N
ATOM 15 C2 C A2869 16.890 12.020 -12.168 1.00 77.16 C
ATOM 16 O2 C A2869 15.708 11.646 -11.988 1.00 77.25 O
ATOM 17 N3 C A2869 17.926 11.743 -11.319 1.00 76.52 N
ATOM 18 C4 C A2869 19.160 12.196 -11.575 1.00 76.48 C
ATOM 19 N4 C A2869 20.153 11.918 -10.724 1.00 75.86 N
ATOM 20 C5 C A2869 19.427 12.969 -12.741 1.00 77.11 C
ATOM 21 C6 C A2869 18.412 13.225 -13.571 1.00 77.74 C
ATOM 22 P C A2870 15.349 17.767 -13.164 1.00 74.04 P
ATOM 23 OP1 C A2870 14.324 18.853 -13.341 1.00 74.49 O
ATOM 24 OP2 C A2870 16.779 18.039 -13.529 1.00 73.99 O
ATOM 25 O5' C A2870 15.268 17.211 -11.697 1.00 73.23 O
TER
ATOM 1 O3' A B2866 28.016 9.756 -9.819 1.00 54.64 O
ATOM 2 P C B2867 27.257 8.562 -10.597 1.00 62.56 P
ATOM 3 OP1 C B2867 26.414 7.838 -9.619 1.00 62.14 O
ATOM 4 OP2 C B2867 28.288 7.804 -11.341 1.00 62.72 O
ATOM 5 O5' C B2867 26.325 9.329 -11.613 1.00 63.25 O
ATOM 6 C5' C B2867 25.551 8.608 -12.558 1.00 63.77 C
ATOM 7 C4' C B2867 24.092 8.903 -12.409 1.00 63.93 C
ATOM 8 O4' C B2867 23.643 8.476 -11.097 1.00 63.31 O
ATOM 9 C3' C B2867 23.699 10.383 -12.538 1.00 64.19 C
ATOM 10 O3' C B2867 22.489 10.498 -13.299 1.00 64.77 O
ATOM 11 C2' C B2867 23.410 10.783 -11.099 1.00 63.56 C
ATOM 12 O2' C B2867 22.505 11.865 -10.970 1.00 63.75 O
ATOM 13 C1' C B2867 22.823 9.480 -10.567 1.00 63.26 C
ATOM 14 N1 C B2867 22.812 9.354 -9.107 1.00 62.55 N
ATOM 15 C2 C B2867 21.561 9.436 -8.520 1.00 62.47 C
ATOM 16 O2 C B2867 20.586 9.603 -9.268 1.00 63.00 O
ATOM 17 N3 C B2867 21.460 9.328 -7.180 1.00 61.84 N
ATOM 18 C4 C B2867 22.540 9.146 -6.432 1.00 61.31 C
ATOM 19 N4 C B2867 22.384 9.041 -5.115 1.00 60.71 N
ATOM 20 C5 C B2867 23.825 9.061 -7.020 1.00 61.38 C
ATOM 21 C6 C B2867 23.923 9.168 -8.350 1.00 62.00 C
ATOM 22 P G B2868 22.468 10.139 -14.859 1.00 78.00 P
ATOM 23 OP1 G B2868 21.495 9.037 -15.029 1.00 78.14 O
ATOM 24 OP2 G B2868 23.879 9.923 -15.295 1.00 77.98 O
ATOM 25 O5' G B2868 21.909 11.476 -15.502 1.00 78.56 O
TER
Atoms:
C2: (16.890,12.020,-12.168)
OP1: (19.426,17.635,-16.362)
OP2: (20.559,16.304,-14.476)
C4: (19.160,12.196,-11.575)
O5': (18.308,15.608,-15.339)
C3': (15.704,15.361,-14.137)
C1': (15.973,13.036,-14.177)
O4': (16.416,13.544,-15.430)
C5': (17.175,15.695,-16.180)
P: (19.682,16.325,-15.684)
O2: (15.708,11.646,-11.988)
C4': (16.038,14.945,-15.562)
C2': (15.099,14.103,-13.535)
O2': (13.759,13.918,-13.956)
N1: (17.153,12.750,-13.326)
N3: (17.926,11.743,-11.319)
N4: (20.153,11.918,-10.724)
C6: (18.412,13.225,-13.571)
C5: (19.427,12.969,-12.741)
O3': (14.878,16.504,-14.050)
OP1: (19.426,17.635,-16.362)
OP2: (20.559,16.304,-14.476)
C4: (19.160,12.196,-11.575)
O5': (18.308,15.608,-15.339)
C3': (15.704,15.361,-14.137)
C1': (15.973,13.036,-14.177)
O4': (16.416,13.544,-15.430)
C5': (17.175,15.695,-16.180)
P: (19.682,16.325,-15.684)
O2: (15.708,11.646,-11.988)
C4': (16.038,14.945,-15.562)
C2': (15.099,14.103,-13.535)
O2': (13.759,13.918,-13.956)
N1: (17.153,12.750,-13.326)
N3: (17.926,11.743,-11.319)
N4: (20.153,11.918,-10.724)
C6: (18.412,13.225,-13.571)
C5: (19.427,12.969,-12.741)
O3': (14.878,16.504,-14.050)
C2: (21.561,9.436,-8.520)
OP1: (26.414,7.838,-9.619)
OP2: (28.288,7.804,-11.341)
C4: (22.540,9.146,-6.432)
O5': (26.325,9.329,-11.613)
C3': (23.699,10.383,-12.538)
C1': (22.823,9.480,-10.567)
O4': (23.643,8.476,-11.097)
C5': (25.551,8.608,-12.558)
P: (27.257,8.562,-10.597)
O2: (20.586,9.603,-9.268)
C4': (24.092,8.903,-12.409)
C2': (23.410,10.783,-11.099)
O2': (22.505,11.865,-10.970)
N1: (22.812,9.354,-9.107)
N3: (21.460,9.328,-7.180)
N4: (22.384,9.041,-5.115)
C6: (23.923,9.168,-8.350)
C5: (23.825,9.061,-7.020)
O3': (22.489,10.498,-13.299)
OP1: (26.414,7.838,-9.619)
OP2: (28.288,7.804,-11.341)
C4: (22.540,9.146,-6.432)
O5': (26.325,9.329,-11.613)
C3': (23.699,10.383,-12.538)
C1': (22.823,9.480,-10.567)
O4': (23.643,8.476,-11.097)
C5': (25.551,8.608,-12.558)
P: (27.257,8.562,-10.597)
O2: (20.586,9.603,-9.268)
C4': (24.092,8.903,-12.409)
C2': (23.410,10.783,-11.099)
O2': (22.505,11.865,-10.970)
N1: (22.812,9.354,-9.107)
N3: (21.460,9.328,-7.180)
N4: (22.384,9.041,-5.115)
C6: (23.923,9.168,-8.350)
C5: (23.825,9.061,-7.020)
O3': (22.489,10.498,-13.299)
Image (generated by PyMOL):