Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1989:1944
Extra
PDB:
ATOM 1 O3' U A 988 16.087 -31.241 17.408 1.00 50.75 O
ATOM 2 P C A 989 17.456 -31.585 18.196 1.00 47.17 P
ATOM 3 OP1 C A 989 18.253 -30.332 18.226 1.00 46.86 O
ATOM 4 OP2 C A 989 18.047 -32.779 17.577 1.00 47.47 O
ATOM 5 O5' C A 989 16.929 -31.923 19.649 1.00 46.83 O
ATOM 6 C5' C A 989 17.769 -32.526 20.596 1.00 46.51 C
ATOM 7 C4' C A 989 17.064 -32.668 21.905 1.00 46.23 C
ATOM 8 O4' C A 989 15.793 -33.334 21.696 1.00 46.58 O
ATOM 9 C3' C A 989 17.772 -33.512 22.935 1.00 45.96 C
ATOM 10 O3' C A 989 18.747 -32.811 23.651 1.00 45.50 O
ATOM 11 C2' C A 989 16.640 -34.023 23.801 1.00 45.94 C
ATOM 12 O2' C A 989 16.237 -33.045 24.753 1.00 45.57 O
ATOM 13 C1' C A 989 15.529 -34.207 22.767 1.00 46.44 C
ATOM 14 N1 C A 989 15.481 -35.584 22.244 1.00 46.83 N
ATOM 15 C2 C A 989 15.135 -36.579 23.147 1.00 46.79 C
ATOM 16 O2 C A 989 14.903 -36.219 24.321 1.00 46.41 O
ATOM 17 N3 C A 989 15.031 -37.871 22.749 1.00 47.16 N
ATOM 18 C4 C A 989 15.296 -38.165 21.488 1.00 47.56 C
ATOM 19 N4 C A 989 15.200 -39.452 21.117 1.00 47.94 N
ATOM 20 C5 C A 989 15.670 -37.158 20.536 1.00 47.61 C
ATOM 21 C6 C A 989 15.745 -35.889 20.946 1.00 47.25 C
ATOM 22 P A A 990 20.136 -33.519 23.936 1.00 47.54 P
ATOM 23 OP1 A A 990 21.131 -32.463 24.028 1.00 47.22 O
ATOM 24 OP2 A A 990 20.323 -34.572 22.907 1.00 47.99 O
ATOM 25 O5' A A 990 19.896 -34.187 25.344 1.00 47.28 O
TER
ATOM 1 O3' G B 943 20.735 -42.361 15.589 1.00 56.32 O
ATOM 2 P C B 944 19.527 -41.537 14.898 1.00 60.59 P
ATOM 3 OP1 C B 944 19.544 -41.932 13.474 1.00 61.18 O
ATOM 4 OP2 C B 944 19.647 -40.118 15.235 1.00 60.16 O
ATOM 5 O5' C B 944 18.246 -42.119 15.602 1.00 60.65 O
ATOM 6 C5' C B 944 18.182 -43.476 16.005 1.00 60.82 C
ATOM 7 C4' C B 944 17.117 -43.652 17.040 1.00 60.65 C
ATOM 8 O4' C B 944 17.668 -43.304 18.365 1.00 60.06 O
ATOM 9 C3' C B 944 15.910 -42.743 16.816 1.00 60.70 C
ATOM 10 O3' C B 944 14.692 -43.455 16.971 1.00 60.98 O
ATOM 11 C2' C B 944 16.052 -41.683 17.905 1.00 60.08 C
ATOM 12 O2' C B 944 14.840 -41.091 18.355 1.00 59.99 O
ATOM 13 C1' C B 944 16.782 -42.435 19.021 1.00 59.77 C
ATOM 14 N1 C B 944 17.524 -41.503 19.885 1.00 59.19 N
ATOM 15 C2 C B 944 17.440 -41.446 21.269 1.00 58.76 C
ATOM 16 O2 C B 944 16.930 -42.355 21.924 1.00 58.82 O
ATOM 17 N3 C B 944 18.033 -40.408 21.870 1.00 58.28 N
ATOM 18 C4 C B 944 18.611 -39.442 21.182 1.00 58.22 C
ATOM 19 N4 C B 944 19.173 -38.441 21.849 1.00 57.74 N
ATOM 20 C5 C B 944 18.656 -39.427 19.782 1.00 58.64 C
ATOM 21 C6 C B 944 18.075 -40.454 19.200 1.00 59.12 C
ATOM 22 P G B 945 13.445 -43.076 16.034 1.00 77.95 P
ATOM 23 OP1 G B 945 13.979 -42.343 14.868 1.00 78.11 O
ATOM 24 OP2 G B 945 12.432 -42.413 16.894 1.00 77.67 O
ATOM 25 O5' G B 945 12.949 -44.500 15.562 1.00 78.52 O
TER
ATOM 2 P C A 989 17.456 -31.585 18.196 1.00 47.17 P
ATOM 3 OP1 C A 989 18.253 -30.332 18.226 1.00 46.86 O
ATOM 4 OP2 C A 989 18.047 -32.779 17.577 1.00 47.47 O
ATOM 5 O5' C A 989 16.929 -31.923 19.649 1.00 46.83 O
ATOM 6 C5' C A 989 17.769 -32.526 20.596 1.00 46.51 C
ATOM 7 C4' C A 989 17.064 -32.668 21.905 1.00 46.23 C
ATOM 8 O4' C A 989 15.793 -33.334 21.696 1.00 46.58 O
ATOM 9 C3' C A 989 17.772 -33.512 22.935 1.00 45.96 C
ATOM 10 O3' C A 989 18.747 -32.811 23.651 1.00 45.50 O
ATOM 11 C2' C A 989 16.640 -34.023 23.801 1.00 45.94 C
ATOM 12 O2' C A 989 16.237 -33.045 24.753 1.00 45.57 O
ATOM 13 C1' C A 989 15.529 -34.207 22.767 1.00 46.44 C
ATOM 14 N1 C A 989 15.481 -35.584 22.244 1.00 46.83 N
ATOM 15 C2 C A 989 15.135 -36.579 23.147 1.00 46.79 C
ATOM 16 O2 C A 989 14.903 -36.219 24.321 1.00 46.41 O
ATOM 17 N3 C A 989 15.031 -37.871 22.749 1.00 47.16 N
ATOM 18 C4 C A 989 15.296 -38.165 21.488 1.00 47.56 C
ATOM 19 N4 C A 989 15.200 -39.452 21.117 1.00 47.94 N
ATOM 20 C5 C A 989 15.670 -37.158 20.536 1.00 47.61 C
ATOM 21 C6 C A 989 15.745 -35.889 20.946 1.00 47.25 C
ATOM 22 P A A 990 20.136 -33.519 23.936 1.00 47.54 P
ATOM 23 OP1 A A 990 21.131 -32.463 24.028 1.00 47.22 O
ATOM 24 OP2 A A 990 20.323 -34.572 22.907 1.00 47.99 O
ATOM 25 O5' A A 990 19.896 -34.187 25.344 1.00 47.28 O
TER
ATOM 1 O3' G B 943 20.735 -42.361 15.589 1.00 56.32 O
ATOM 2 P C B 944 19.527 -41.537 14.898 1.00 60.59 P
ATOM 3 OP1 C B 944 19.544 -41.932 13.474 1.00 61.18 O
ATOM 4 OP2 C B 944 19.647 -40.118 15.235 1.00 60.16 O
ATOM 5 O5' C B 944 18.246 -42.119 15.602 1.00 60.65 O
ATOM 6 C5' C B 944 18.182 -43.476 16.005 1.00 60.82 C
ATOM 7 C4' C B 944 17.117 -43.652 17.040 1.00 60.65 C
ATOM 8 O4' C B 944 17.668 -43.304 18.365 1.00 60.06 O
ATOM 9 C3' C B 944 15.910 -42.743 16.816 1.00 60.70 C
ATOM 10 O3' C B 944 14.692 -43.455 16.971 1.00 60.98 O
ATOM 11 C2' C B 944 16.052 -41.683 17.905 1.00 60.08 C
ATOM 12 O2' C B 944 14.840 -41.091 18.355 1.00 59.99 O
ATOM 13 C1' C B 944 16.782 -42.435 19.021 1.00 59.77 C
ATOM 14 N1 C B 944 17.524 -41.503 19.885 1.00 59.19 N
ATOM 15 C2 C B 944 17.440 -41.446 21.269 1.00 58.76 C
ATOM 16 O2 C B 944 16.930 -42.355 21.924 1.00 58.82 O
ATOM 17 N3 C B 944 18.033 -40.408 21.870 1.00 58.28 N
ATOM 18 C4 C B 944 18.611 -39.442 21.182 1.00 58.22 C
ATOM 19 N4 C B 944 19.173 -38.441 21.849 1.00 57.74 N
ATOM 20 C5 C B 944 18.656 -39.427 19.782 1.00 58.64 C
ATOM 21 C6 C B 944 18.075 -40.454 19.200 1.00 59.12 C
ATOM 22 P G B 945 13.445 -43.076 16.034 1.00 77.95 P
ATOM 23 OP1 G B 945 13.979 -42.343 14.868 1.00 78.11 O
ATOM 24 OP2 G B 945 12.432 -42.413 16.894 1.00 77.67 O
ATOM 25 O5' G B 945 12.949 -44.500 15.562 1.00 78.52 O
TER
Atoms:
C2: (15.135,-36.579,23.147)
OP1: (18.253,-30.332,18.226)
OP2: (18.047,-32.779,17.577)
C4: (15.296,-38.165,21.488)
O5': (16.929,-31.923,19.649)
C3': (17.772,-33.512,22.935)
C1': (15.529,-34.207,22.767)
O4': (15.793,-33.334,21.696)
C5': (17.769,-32.526,20.596)
P: (17.456,-31.585,18.196)
O2: (14.903,-36.219,24.321)
C4': (17.064,-32.668,21.905)
C2': (16.640,-34.023,23.801)
O2': (16.237,-33.045,24.753)
N1: (15.481,-35.584,22.244)
N3: (15.031,-37.871,22.749)
N4: (15.200,-39.452,21.117)
C6: (15.745,-35.889,20.946)
C5: (15.670,-37.158,20.536)
O3': (18.747,-32.811,23.651)
OP1: (18.253,-30.332,18.226)
OP2: (18.047,-32.779,17.577)
C4: (15.296,-38.165,21.488)
O5': (16.929,-31.923,19.649)
C3': (17.772,-33.512,22.935)
C1': (15.529,-34.207,22.767)
O4': (15.793,-33.334,21.696)
C5': (17.769,-32.526,20.596)
P: (17.456,-31.585,18.196)
O2: (14.903,-36.219,24.321)
C4': (17.064,-32.668,21.905)
C2': (16.640,-34.023,23.801)
O2': (16.237,-33.045,24.753)
N1: (15.481,-35.584,22.244)
N3: (15.031,-37.871,22.749)
N4: (15.200,-39.452,21.117)
C6: (15.745,-35.889,20.946)
C5: (15.670,-37.158,20.536)
O3': (18.747,-32.811,23.651)
C2: (17.440,-41.446,21.269)
OP1: (19.544,-41.932,13.474)
OP2: (19.647,-40.118,15.235)
C4: (18.611,-39.442,21.182)
O5': (18.246,-42.119,15.602)
C3': (15.910,-42.743,16.816)
C1': (16.782,-42.435,19.021)
O4': (17.668,-43.304,18.365)
C5': (18.182,-43.476,16.005)
P: (19.527,-41.537,14.898)
O2: (16.930,-42.355,21.924)
C4': (17.117,-43.652,17.040)
C2': (16.052,-41.683,17.905)
O2': (14.840,-41.091,18.355)
N1: (17.524,-41.503,19.885)
N3: (18.033,-40.408,21.870)
N4: (19.173,-38.441,21.849)
C6: (18.075,-40.454,19.200)
C5: (18.656,-39.427,19.782)
O3': (14.692,-43.455,16.971)
OP1: (19.544,-41.932,13.474)
OP2: (19.647,-40.118,15.235)
C4: (18.611,-39.442,21.182)
O5': (18.246,-42.119,15.602)
C3': (15.910,-42.743,16.816)
C1': (16.782,-42.435,19.021)
O4': (17.668,-43.304,18.365)
C5': (18.182,-43.476,16.005)
P: (19.527,-41.537,14.898)
O2: (16.930,-42.355,21.924)
C4': (17.117,-43.652,17.040)
C2': (16.052,-41.683,17.905)
O2': (14.840,-41.091,18.355)
N1: (17.524,-41.503,19.885)
N3: (18.033,-40.408,21.870)
N4: (19.173,-38.441,21.849)
C6: (18.075,-40.454,19.200)
C5: (18.656,-39.427,19.782)
O3': (14.692,-43.455,16.971)
Image (generated by PyMOL):