Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:C39:C50
Extra
PDB:
ATOM 1 O3' G A 38 100.422 101.634 8.576 1.00 62.57 O
ATOM 2 P U A 39 100.047 102.271 7.162 1.00 65.20 P
ATOM 3 OP1 U A 39 98.568 102.171 7.042 1.00 65.60 O
ATOM 4 OP2 U A 39 100.911 101.621 6.136 1.00 64.17 O
ATOM 5 O5' U A 39 100.458 103.798 7.373 1.00 63.71 O
ATOM 6 C5' U A 39 99.933 104.823 6.553 1.00 65.74 C
ATOM 7 C4' U A 39 100.215 106.164 7.171 1.00 67.16 C
ATOM 8 O4' U A 39 99.423 106.336 8.373 1.00 68.40 O
ATOM 9 C3' U A 39 101.630 106.318 7.672 1.00 68.83 C
ATOM 10 O3' U A 39 102.522 106.632 6.630 1.00 71.76 O
ATOM 11 C2' U A 39 101.502 107.442 8.687 1.00 68.48 C
ATOM 12 O2' U A 39 101.470 108.727 8.109 1.00 69.97 O
ATOM 13 C1' U A 39 100.149 107.119 9.312 1.00 68.15 C
ATOM 14 N1 U A 39 100.289 106.361 10.563 1.00 67.32 N
ATOM 15 C2 U A 39 100.528 107.091 11.714 1.00 68.14 C
ATOM 16 O2 U A 39 100.646 108.310 11.712 1.00 68.36 O
ATOM 17 N3 U A 39 100.628 106.347 12.866 1.00 68.04 N
ATOM 18 C4 U A 39 100.518 104.974 12.979 1.00 67.37 C
ATOM 19 O4 U A 39 100.573 104.454 14.099 1.00 66.91 O
ATOM 20 C5 U A 39 100.288 104.288 11.737 1.00 66.38 C
ATOM 21 C6 U A 39 100.183 104.988 10.602 1.00 66.02 C
ATOM 22 P G A 40 104.092 106.410 6.862 1.00 74.54 P
ATOM 23 OP1 G A 40 104.666 105.804 5.630 1.00 73.70 O
ATOM 24 OP2 G A 40 104.252 105.711 8.169 1.00 74.99 O
ATOM 25 O5' G A 40 104.652 107.886 7.063 1.00 74.27 O
TER
ATOM 1 O3' C B 49 101.690 110.427 23.053 1.00 81.91 O
ATOM 2 P U B 50 100.139 110.172 22.691 1.00 83.18 P
ATOM 3 OP1 U B 50 99.428 111.420 23.097 1.00 81.98 O
ATOM 4 OP2 U B 50 99.718 108.861 23.266 1.00 82.29 O
ATOM 5 O5' U B 50 100.119 110.071 21.094 1.00 81.25 O
ATOM 6 C5' U B 50 100.495 111.200 20.310 1.00 78.99 C
ATOM 7 C4' U B 50 100.493 110.883 18.830 1.00 77.29 C
ATOM 8 O4' U B 50 101.433 109.817 18.523 1.00 76.83 O
ATOM 9 C3' U B 50 99.223 110.373 18.173 1.00 76.68 C
ATOM 10 O3' U B 50 98.233 111.387 18.019 1.00 76.37 O
ATOM 11 C2' U B 50 99.781 109.910 16.829 1.00 76.16 C
ATOM 12 O2' U B 50 100.128 110.978 15.960 1.00 75.66 O
ATOM 13 C1' U B 50 101.072 109.226 17.277 1.00 75.20 C
ATOM 14 N1 U B 50 100.877 107.781 17.458 1.00 72.98 N
ATOM 15 C2 U B 50 100.797 106.997 16.314 1.00 72.21 C
ATOM 16 O2 U B 50 100.886 107.451 15.185 1.00 72.49 O
ATOM 17 N3 U B 50 100.607 105.663 16.539 1.00 71.13 N
ATOM 18 C4 U B 50 100.492 105.040 17.757 1.00 71.77 C
ATOM 19 O4 U B 50 100.303 103.821 17.796 1.00 71.47 O
ATOM 20 C5 U B 50 100.588 105.915 18.890 1.00 71.81 C
ATOM 21 C6 U B 50 100.771 107.222 18.704 1.00 72.18 C
ATOM 22 P C B 51 96.672 110.976 17.912 1.00 75.70 P
ATOM 23 OP1 C B 51 95.926 112.231 18.197 1.00 75.79 O
ATOM 24 OP2 C B 51 96.382 109.758 18.717 1.00 75.31 O
ATOM 25 O5' C B 51 96.491 110.599 16.373 1.00 73.87 O
TER
ATOM 2 P U A 39 100.047 102.271 7.162 1.00 65.20 P
ATOM 3 OP1 U A 39 98.568 102.171 7.042 1.00 65.60 O
ATOM 4 OP2 U A 39 100.911 101.621 6.136 1.00 64.17 O
ATOM 5 O5' U A 39 100.458 103.798 7.373 1.00 63.71 O
ATOM 6 C5' U A 39 99.933 104.823 6.553 1.00 65.74 C
ATOM 7 C4' U A 39 100.215 106.164 7.171 1.00 67.16 C
ATOM 8 O4' U A 39 99.423 106.336 8.373 1.00 68.40 O
ATOM 9 C3' U A 39 101.630 106.318 7.672 1.00 68.83 C
ATOM 10 O3' U A 39 102.522 106.632 6.630 1.00 71.76 O
ATOM 11 C2' U A 39 101.502 107.442 8.687 1.00 68.48 C
ATOM 12 O2' U A 39 101.470 108.727 8.109 1.00 69.97 O
ATOM 13 C1' U A 39 100.149 107.119 9.312 1.00 68.15 C
ATOM 14 N1 U A 39 100.289 106.361 10.563 1.00 67.32 N
ATOM 15 C2 U A 39 100.528 107.091 11.714 1.00 68.14 C
ATOM 16 O2 U A 39 100.646 108.310 11.712 1.00 68.36 O
ATOM 17 N3 U A 39 100.628 106.347 12.866 1.00 68.04 N
ATOM 18 C4 U A 39 100.518 104.974 12.979 1.00 67.37 C
ATOM 19 O4 U A 39 100.573 104.454 14.099 1.00 66.91 O
ATOM 20 C5 U A 39 100.288 104.288 11.737 1.00 66.38 C
ATOM 21 C6 U A 39 100.183 104.988 10.602 1.00 66.02 C
ATOM 22 P G A 40 104.092 106.410 6.862 1.00 74.54 P
ATOM 23 OP1 G A 40 104.666 105.804 5.630 1.00 73.70 O
ATOM 24 OP2 G A 40 104.252 105.711 8.169 1.00 74.99 O
ATOM 25 O5' G A 40 104.652 107.886 7.063 1.00 74.27 O
TER
ATOM 1 O3' C B 49 101.690 110.427 23.053 1.00 81.91 O
ATOM 2 P U B 50 100.139 110.172 22.691 1.00 83.18 P
ATOM 3 OP1 U B 50 99.428 111.420 23.097 1.00 81.98 O
ATOM 4 OP2 U B 50 99.718 108.861 23.266 1.00 82.29 O
ATOM 5 O5' U B 50 100.119 110.071 21.094 1.00 81.25 O
ATOM 6 C5' U B 50 100.495 111.200 20.310 1.00 78.99 C
ATOM 7 C4' U B 50 100.493 110.883 18.830 1.00 77.29 C
ATOM 8 O4' U B 50 101.433 109.817 18.523 1.00 76.83 O
ATOM 9 C3' U B 50 99.223 110.373 18.173 1.00 76.68 C
ATOM 10 O3' U B 50 98.233 111.387 18.019 1.00 76.37 O
ATOM 11 C2' U B 50 99.781 109.910 16.829 1.00 76.16 C
ATOM 12 O2' U B 50 100.128 110.978 15.960 1.00 75.66 O
ATOM 13 C1' U B 50 101.072 109.226 17.277 1.00 75.20 C
ATOM 14 N1 U B 50 100.877 107.781 17.458 1.00 72.98 N
ATOM 15 C2 U B 50 100.797 106.997 16.314 1.00 72.21 C
ATOM 16 O2 U B 50 100.886 107.451 15.185 1.00 72.49 O
ATOM 17 N3 U B 50 100.607 105.663 16.539 1.00 71.13 N
ATOM 18 C4 U B 50 100.492 105.040 17.757 1.00 71.77 C
ATOM 19 O4 U B 50 100.303 103.821 17.796 1.00 71.47 O
ATOM 20 C5 U B 50 100.588 105.915 18.890 1.00 71.81 C
ATOM 21 C6 U B 50 100.771 107.222 18.704 1.00 72.18 C
ATOM 22 P C B 51 96.672 110.976 17.912 1.00 75.70 P
ATOM 23 OP1 C B 51 95.926 112.231 18.197 1.00 75.79 O
ATOM 24 OP2 C B 51 96.382 109.758 18.717 1.00 75.31 O
ATOM 25 O5' C B 51 96.491 110.599 16.373 1.00 73.87 O
TER
Atoms:
C4: (100.518,104.974,12.979)
N3: (100.628,106.347,12.866)
OP1: (98.568,102.171,7.042)
OP2: (100.911,101.621,6.136)
C2: (100.528,107.091,11.714)
C1': (100.149,107.119,9.312)
C3': (101.630,106.318,7.672)
O5': (100.458,103.798,7.373)
O4': (99.423,106.336,8.373)
C5': (99.933,104.823,6.553)
P: (100.047,102.271,7.162)
C4': (100.215,106.164,7.171)
C2': (101.502,107.442,8.687)
O2': (101.470,108.727,8.109)
N1: (100.289,106.361,10.563)
O4: (100.573,104.454,14.099)
O2: (100.646,108.310,11.712)
C6: (100.183,104.988,10.602)
C5: (100.288,104.288,11.737)
O3': (102.522,106.632,6.630)
N3: (100.628,106.347,12.866)
OP1: (98.568,102.171,7.042)
OP2: (100.911,101.621,6.136)
C2: (100.528,107.091,11.714)
C1': (100.149,107.119,9.312)
C3': (101.630,106.318,7.672)
O5': (100.458,103.798,7.373)
O4': (99.423,106.336,8.373)
C5': (99.933,104.823,6.553)
P: (100.047,102.271,7.162)
C4': (100.215,106.164,7.171)
C2': (101.502,107.442,8.687)
O2': (101.470,108.727,8.109)
N1: (100.289,106.361,10.563)
O4: (100.573,104.454,14.099)
O2: (100.646,108.310,11.712)
C6: (100.183,104.988,10.602)
C5: (100.288,104.288,11.737)
O3': (102.522,106.632,6.630)
C4: (100.492,105.040,17.757)
N3: (100.607,105.663,16.539)
OP1: (99.428,111.420,23.097)
OP2: (99.718,108.861,23.266)
C2: (100.797,106.997,16.314)
C1': (101.072,109.226,17.277)
C3': (99.223,110.373,18.173)
O5': (100.119,110.071,21.094)
O4': (101.433,109.817,18.523)
C5': (100.495,111.200,20.310)
P: (100.139,110.172,22.691)
C4': (100.493,110.883,18.830)
C2': (99.781,109.910,16.829)
O2': (100.128,110.978,15.960)
N1: (100.877,107.781,17.458)
O4: (100.303,103.821,17.796)
O2: (100.886,107.451,15.185)
C6: (100.771,107.222,18.704)
C5: (100.588,105.915,18.890)
O3': (98.233,111.387,18.019)
N3: (100.607,105.663,16.539)
OP1: (99.428,111.420,23.097)
OP2: (99.718,108.861,23.266)
C2: (100.797,106.997,16.314)
C1': (101.072,109.226,17.277)
C3': (99.223,110.373,18.173)
O5': (100.119,110.071,21.094)
O4': (101.433,109.817,18.523)
C5': (100.495,111.200,20.310)
P: (100.139,110.172,22.691)
C4': (100.493,110.883,18.830)
C2': (99.781,109.910,16.829)
O2': (100.128,110.978,15.960)
N1: (100.877,107.781,17.458)
O4: (100.303,103.821,17.796)
O2: (100.886,107.451,15.185)
C6: (100.771,107.222,18.704)
C5: (100.588,105.915,18.890)
O3': (98.233,111.387,18.019)
Image (generated by PyMOL):