Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A1039:A1170
Extra
PDB:
ATOM 1 O3' G A1038 211.427 125.600 1.940 1.00 47.06 O
ATOM 2 P U A1039 210.863 126.577 0.797 1.00 49.05 P
ATOM 3 OP1 U A1039 212.008 126.935 -0.093 1.00 51.03 O
ATOM 4 OP2 U A1039 210.080 127.670 1.439 1.00 48.98 O
ATOM 5 O5' U A1039 209.878 125.658 -0.036 1.00 48.83 O
ATOM 6 C5' U A1039 210.323 124.430 -0.631 1.00 48.08 C
ATOM 7 C4' U A1039 209.134 123.622 -1.079 1.00 47.87 C
ATOM 8 O4' U A1039 208.388 123.194 0.088 1.00 50.15 O
ATOM 9 C3' U A1039 208.133 124.398 -1.914 1.00 46.98 C
ATOM 10 O3' U A1039 208.475 124.390 -3.272 1.00 44.39 O
ATOM 11 C2' U A1039 206.824 123.676 -1.648 1.00 49.14 C
ATOM 12 O2' U A1039 206.634 122.551 -2.479 1.00 50.89 O
ATOM 13 C1' U A1039 206.997 123.241 -0.191 1.00 50.97 C
ATOM 14 N1 U A1039 206.342 124.153 0.765 1.00 53.15 N
ATOM 15 C2 U A1039 204.961 124.083 0.881 1.00 53.95 C
ATOM 16 O2 U A1039 204.282 123.307 0.240 1.00 55.80 O
ATOM 17 N3 U A1039 204.407 124.954 1.782 1.00 54.86 N
ATOM 18 C4 U A1039 205.071 125.862 2.574 1.00 54.97 C
ATOM 19 O4 U A1039 204.441 126.486 3.424 1.00 54.82 O
ATOM 20 C5 U A1039 206.490 125.881 2.399 1.00 54.75 C
ATOM 21 C6 U A1039 207.063 125.049 1.523 1.00 53.41 C
ATOM 22 P C A1040 208.972 125.749 -3.962 1.00 43.17 P
ATOM 23 OP1 C A1040 210.185 125.420 -4.766 1.00 42.23 O
ATOM 24 OP2 C A1040 209.043 126.781 -2.899 1.00 44.94 O
ATOM 25 O5' C A1040 207.804 126.129 -4.973 1.00 41.94 O
TER
ATOM 1 O3' G B1169 193.628 123.528 2.256 1.00 50.66 O
ATOM 2 P U B1170 194.466 122.252 2.737 1.00 50.78 P
ATOM 3 OP1 U B1170 193.532 121.098 2.854 1.00 51.28 O
ATOM 4 OP2 U B1170 195.285 122.641 3.909 1.00 51.32 O
ATOM 5 O5' U B1170 195.409 121.964 1.511 1.00 52.12 O
ATOM 6 C5' U B1170 194.865 121.614 0.231 1.00 53.07 C
ATOM 7 C4' U B1170 195.956 121.118 -0.682 1.00 53.95 C
ATOM 8 O4' U B1170 196.871 122.196 -1.015 1.00 55.11 O
ATOM 9 C3' U B1170 196.831 120.033 -0.091 1.00 53.76 C
ATOM 10 O3' U B1170 196.242 118.774 -0.254 1.00 53.62 O
ATOM 11 C2' U B1170 198.117 120.169 -0.891 1.00 55.08 C
ATOM 12 O2' U B1170 198.027 119.487 -2.125 1.00 56.05 O
ATOM 13 C1' U B1170 198.188 121.683 -1.128 1.00 55.54 C
ATOM 14 N1 U B1170 199.054 122.388 -0.166 1.00 57.44 N
ATOM 15 C2 U B1170 200.409 122.496 -0.455 1.00 58.19 C
ATOM 16 O2 U B1170 200.916 122.057 -1.478 1.00 59.99 O
ATOM 17 N3 U B1170 201.153 123.147 0.499 1.00 58.36 N
ATOM 18 C4 U B1170 200.701 123.698 1.678 1.00 57.33 C
ATOM 19 O4 U B1170 201.496 124.273 2.424 1.00 56.00 O
ATOM 20 C5 U B1170 199.300 123.555 1.901 1.00 57.86 C
ATOM 21 C6 U B1170 198.543 122.924 0.997 1.00 57.94 C
ATOM 22 P C B1171 196.618 117.589 0.760 1.00 55.79 P
ATOM 23 OP1 C B1171 195.820 116.385 0.370 1.00 56.32 O
ATOM 24 OP2 C B1171 196.564 118.105 2.149 1.00 56.46 O
ATOM 25 O5' C B1171 198.108 117.285 0.430 1.00 57.23 O
TER
ATOM 2 P U A1039 210.863 126.577 0.797 1.00 49.05 P
ATOM 3 OP1 U A1039 212.008 126.935 -0.093 1.00 51.03 O
ATOM 4 OP2 U A1039 210.080 127.670 1.439 1.00 48.98 O
ATOM 5 O5' U A1039 209.878 125.658 -0.036 1.00 48.83 O
ATOM 6 C5' U A1039 210.323 124.430 -0.631 1.00 48.08 C
ATOM 7 C4' U A1039 209.134 123.622 -1.079 1.00 47.87 C
ATOM 8 O4' U A1039 208.388 123.194 0.088 1.00 50.15 O
ATOM 9 C3' U A1039 208.133 124.398 -1.914 1.00 46.98 C
ATOM 10 O3' U A1039 208.475 124.390 -3.272 1.00 44.39 O
ATOM 11 C2' U A1039 206.824 123.676 -1.648 1.00 49.14 C
ATOM 12 O2' U A1039 206.634 122.551 -2.479 1.00 50.89 O
ATOM 13 C1' U A1039 206.997 123.241 -0.191 1.00 50.97 C
ATOM 14 N1 U A1039 206.342 124.153 0.765 1.00 53.15 N
ATOM 15 C2 U A1039 204.961 124.083 0.881 1.00 53.95 C
ATOM 16 O2 U A1039 204.282 123.307 0.240 1.00 55.80 O
ATOM 17 N3 U A1039 204.407 124.954 1.782 1.00 54.86 N
ATOM 18 C4 U A1039 205.071 125.862 2.574 1.00 54.97 C
ATOM 19 O4 U A1039 204.441 126.486 3.424 1.00 54.82 O
ATOM 20 C5 U A1039 206.490 125.881 2.399 1.00 54.75 C
ATOM 21 C6 U A1039 207.063 125.049 1.523 1.00 53.41 C
ATOM 22 P C A1040 208.972 125.749 -3.962 1.00 43.17 P
ATOM 23 OP1 C A1040 210.185 125.420 -4.766 1.00 42.23 O
ATOM 24 OP2 C A1040 209.043 126.781 -2.899 1.00 44.94 O
ATOM 25 O5' C A1040 207.804 126.129 -4.973 1.00 41.94 O
TER
ATOM 1 O3' G B1169 193.628 123.528 2.256 1.00 50.66 O
ATOM 2 P U B1170 194.466 122.252 2.737 1.00 50.78 P
ATOM 3 OP1 U B1170 193.532 121.098 2.854 1.00 51.28 O
ATOM 4 OP2 U B1170 195.285 122.641 3.909 1.00 51.32 O
ATOM 5 O5' U B1170 195.409 121.964 1.511 1.00 52.12 O
ATOM 6 C5' U B1170 194.865 121.614 0.231 1.00 53.07 C
ATOM 7 C4' U B1170 195.956 121.118 -0.682 1.00 53.95 C
ATOM 8 O4' U B1170 196.871 122.196 -1.015 1.00 55.11 O
ATOM 9 C3' U B1170 196.831 120.033 -0.091 1.00 53.76 C
ATOM 10 O3' U B1170 196.242 118.774 -0.254 1.00 53.62 O
ATOM 11 C2' U B1170 198.117 120.169 -0.891 1.00 55.08 C
ATOM 12 O2' U B1170 198.027 119.487 -2.125 1.00 56.05 O
ATOM 13 C1' U B1170 198.188 121.683 -1.128 1.00 55.54 C
ATOM 14 N1 U B1170 199.054 122.388 -0.166 1.00 57.44 N
ATOM 15 C2 U B1170 200.409 122.496 -0.455 1.00 58.19 C
ATOM 16 O2 U B1170 200.916 122.057 -1.478 1.00 59.99 O
ATOM 17 N3 U B1170 201.153 123.147 0.499 1.00 58.36 N
ATOM 18 C4 U B1170 200.701 123.698 1.678 1.00 57.33 C
ATOM 19 O4 U B1170 201.496 124.273 2.424 1.00 56.00 O
ATOM 20 C5 U B1170 199.300 123.555 1.901 1.00 57.86 C
ATOM 21 C6 U B1170 198.543 122.924 0.997 1.00 57.94 C
ATOM 22 P C B1171 196.618 117.589 0.760 1.00 55.79 P
ATOM 23 OP1 C B1171 195.820 116.385 0.370 1.00 56.32 O
ATOM 24 OP2 C B1171 196.564 118.105 2.149 1.00 56.46 O
ATOM 25 O5' C B1171 198.108 117.285 0.430 1.00 57.23 O
TER
Atoms:
C4: (205.071,125.862,2.574)
N3: (204.407,124.954,1.782)
OP1: (212.008,126.935,-0.093)
OP2: (210.080,127.670,1.439)
C2: (204.961,124.083,0.881)
C1': (206.997,123.241,-0.191)
C3': (208.133,124.398,-1.914)
O5': (209.878,125.658,-0.036)
O4': (208.388,123.194,0.088)
C5': (210.323,124.430,-0.631)
P: (210.863,126.577,0.797)
C4': (209.134,123.622,-1.079)
C2': (206.824,123.676,-1.648)
O2': (206.634,122.551,-2.479)
N1: (206.342,124.153,0.765)
O4: (204.441,126.486,3.424)
O2: (204.282,123.307,0.240)
C6: (207.063,125.049,1.523)
C5: (206.490,125.881,2.399)
O3': (208.475,124.390,-3.272)
N3: (204.407,124.954,1.782)
OP1: (212.008,126.935,-0.093)
OP2: (210.080,127.670,1.439)
C2: (204.961,124.083,0.881)
C1': (206.997,123.241,-0.191)
C3': (208.133,124.398,-1.914)
O5': (209.878,125.658,-0.036)
O4': (208.388,123.194,0.088)
C5': (210.323,124.430,-0.631)
P: (210.863,126.577,0.797)
C4': (209.134,123.622,-1.079)
C2': (206.824,123.676,-1.648)
O2': (206.634,122.551,-2.479)
N1: (206.342,124.153,0.765)
O4: (204.441,126.486,3.424)
O2: (204.282,123.307,0.240)
C6: (207.063,125.049,1.523)
C5: (206.490,125.881,2.399)
O3': (208.475,124.390,-3.272)
C4: (200.701,123.698,1.678)
N3: (201.153,123.147,0.499)
OP1: (193.532,121.098,2.854)
OP2: (195.285,122.641,3.909)
C2: (200.409,122.496,-0.455)
C1': (198.188,121.683,-1.128)
C3': (196.831,120.033,-0.091)
O5': (195.409,121.964,1.511)
O4': (196.871,122.196,-1.015)
C5': (194.865,121.614,0.231)
P: (194.466,122.252,2.737)
C4': (195.956,121.118,-0.682)
C2': (198.117,120.169,-0.891)
O2': (198.027,119.487,-2.125)
N1: (199.054,122.388,-0.166)
O4: (201.496,124.273,2.424)
O2: (200.916,122.057,-1.478)
C6: (198.543,122.924,0.997)
C5: (199.300,123.555,1.901)
O3': (196.242,118.774,-0.254)
N3: (201.153,123.147,0.499)
OP1: (193.532,121.098,2.854)
OP2: (195.285,122.641,3.909)
C2: (200.409,122.496,-0.455)
C1': (198.188,121.683,-1.128)
C3': (196.831,120.033,-0.091)
O5': (195.409,121.964,1.511)
O4': (196.871,122.196,-1.015)
C5': (194.865,121.614,0.231)
P: (194.466,122.252,2.737)
C4': (195.956,121.118,-0.682)
C2': (198.117,120.169,-0.891)
O2': (198.027,119.487,-2.125)
N1: (199.054,122.388,-0.166)
O4: (201.496,124.273,2.424)
O2: (200.916,122.057,-1.478)
C6: (198.543,122.924,0.997)
C5: (199.300,123.555,1.901)
O3': (196.242,118.774,-0.254)
Image (generated by PyMOL):