Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1039:A1170
Extra
PDB:
ATOM 1 O3' G A1038 211.787 125.777 2.148 1.00 74.53 O
ATOM 2 P U A1039 211.267 126.752 0.977 1.00 76.11 P
ATOM 3 OP1 U A1039 212.474 127.068 0.152 1.00 76.73 O
ATOM 4 OP2 U A1039 210.475 127.880 1.548 1.00 74.89 O
ATOM 5 O5' U A1039 210.295 125.823 0.115 1.00 75.71 O
ATOM 6 C5' U A1039 210.771 124.631 -0.541 1.00 74.49 C
ATOM 7 C4' U A1039 209.602 123.811 -1.027 1.00 74.65 C
ATOM 8 O4' U A1039 208.875 123.295 0.118 1.00 77.50 O
ATOM 9 C3' U A1039 208.569 124.586 -1.833 1.00 73.69 C
ATOM 10 O3' U A1039 208.882 124.606 -3.201 1.00 70.69 O
ATOM 11 C2' U A1039 207.291 123.801 -1.596 1.00 76.41 C
ATOM 12 O2' U A1039 207.136 122.723 -2.499 1.00 77.44 O
ATOM 13 C1' U A1039 207.479 123.307 -0.157 1.00 78.67 C
ATOM 14 N1 U A1039 206.795 124.168 0.831 1.00 80.99 N
ATOM 15 C2 U A1039 205.414 124.045 0.957 1.00 82.50 C
ATOM 16 O2 U A1039 204.756 123.241 0.321 1.00 85.19 O
ATOM 17 N3 U A1039 204.832 124.898 1.861 1.00 83.00 N
ATOM 18 C4 U A1039 205.463 125.830 2.650 1.00 82.05 C
ATOM 19 O4 U A1039 204.807 126.455 3.478 1.00 80.93 O
ATOM 20 C5 U A1039 206.880 125.894 2.479 1.00 82.61 C
ATOM 21 C6 U A1039 207.484 125.081 1.601 1.00 81.55 C
ATOM 22 P C A1040 209.314 125.983 -3.897 1.00 68.44 P
ATOM 23 OP1 C A1040 210.562 125.681 -4.656 1.00 67.35 O
ATOM 24 OP2 C A1040 209.312 127.054 -2.877 1.00 69.98 O
ATOM 25 O5' C A1040 208.130 126.298 -4.920 1.00 67.45 O
TER
ATOM 1 O3' G B1169 193.995 123.697 2.384 1.00 77.21 O
ATOM 2 P U B1170 194.838 122.394 2.807 1.00 78.82 P
ATOM 3 OP1 U B1170 193.896 121.238 2.913 1.00 78.55 O
ATOM 4 OP2 U B1170 195.686 122.743 3.969 1.00 78.53 O
ATOM 5 O5' U B1170 195.775 122.122 1.552 1.00 80.14 O
ATOM 6 C5' U B1170 195.237 121.643 0.303 1.00 80.59 C
ATOM 7 C4' U B1170 196.347 121.123 -0.583 1.00 81.11 C
ATOM 8 O4' U B1170 197.251 122.207 -0.932 1.00 81.77 O
ATOM 9 C3' U B1170 197.235 120.060 0.041 1.00 81.27 C
ATOM 10 O3' U B1170 196.697 118.766 -0.111 1.00 81.65 O
ATOM 11 C2' U B1170 198.532 120.204 -0.739 1.00 82.48 C
ATOM 12 O2' U B1170 198.486 119.495 -1.959 1.00 83.23 O
ATOM 13 C1' U B1170 198.581 121.714 -1.004 1.00 83.07 C
ATOM 14 N1 U B1170 199.420 122.451 -0.038 1.00 84.70 N
ATOM 15 C2 U B1170 200.790 122.545 -0.284 1.00 85.99 C
ATOM 16 O2 U B1170 201.335 122.050 -1.256 1.00 88.37 O
ATOM 17 N3 U B1170 201.499 123.250 0.655 1.00 86.61 N
ATOM 18 C4 U B1170 201.007 123.867 1.781 1.00 85.56 C
ATOM 19 O4 U B1170 201.760 124.545 2.475 1.00 85.61 O
ATOM 20 C5 U B1170 199.602 123.720 1.971 1.00 85.74 C
ATOM 21 C6 U B1170 198.875 123.037 1.081 1.00 85.08 C
ATOM 22 P C B1171 197.028 117.635 0.983 1.00 83.16 P
ATOM 23 OP1 C B1171 196.216 116.418 0.674 1.00 82.58 O
ATOM 24 OP2 C B1171 196.941 118.264 2.323 1.00 84.40 O
ATOM 25 O5' C B1171 198.529 117.270 0.709 1.00 84.32 O
TER
ATOM 2 P U A1039 211.267 126.752 0.977 1.00 76.11 P
ATOM 3 OP1 U A1039 212.474 127.068 0.152 1.00 76.73 O
ATOM 4 OP2 U A1039 210.475 127.880 1.548 1.00 74.89 O
ATOM 5 O5' U A1039 210.295 125.823 0.115 1.00 75.71 O
ATOM 6 C5' U A1039 210.771 124.631 -0.541 1.00 74.49 C
ATOM 7 C4' U A1039 209.602 123.811 -1.027 1.00 74.65 C
ATOM 8 O4' U A1039 208.875 123.295 0.118 1.00 77.50 O
ATOM 9 C3' U A1039 208.569 124.586 -1.833 1.00 73.69 C
ATOM 10 O3' U A1039 208.882 124.606 -3.201 1.00 70.69 O
ATOM 11 C2' U A1039 207.291 123.801 -1.596 1.00 76.41 C
ATOM 12 O2' U A1039 207.136 122.723 -2.499 1.00 77.44 O
ATOM 13 C1' U A1039 207.479 123.307 -0.157 1.00 78.67 C
ATOM 14 N1 U A1039 206.795 124.168 0.831 1.00 80.99 N
ATOM 15 C2 U A1039 205.414 124.045 0.957 1.00 82.50 C
ATOM 16 O2 U A1039 204.756 123.241 0.321 1.00 85.19 O
ATOM 17 N3 U A1039 204.832 124.898 1.861 1.00 83.00 N
ATOM 18 C4 U A1039 205.463 125.830 2.650 1.00 82.05 C
ATOM 19 O4 U A1039 204.807 126.455 3.478 1.00 80.93 O
ATOM 20 C5 U A1039 206.880 125.894 2.479 1.00 82.61 C
ATOM 21 C6 U A1039 207.484 125.081 1.601 1.00 81.55 C
ATOM 22 P C A1040 209.314 125.983 -3.897 1.00 68.44 P
ATOM 23 OP1 C A1040 210.562 125.681 -4.656 1.00 67.35 O
ATOM 24 OP2 C A1040 209.312 127.054 -2.877 1.00 69.98 O
ATOM 25 O5' C A1040 208.130 126.298 -4.920 1.00 67.45 O
TER
ATOM 1 O3' G B1169 193.995 123.697 2.384 1.00 77.21 O
ATOM 2 P U B1170 194.838 122.394 2.807 1.00 78.82 P
ATOM 3 OP1 U B1170 193.896 121.238 2.913 1.00 78.55 O
ATOM 4 OP2 U B1170 195.686 122.743 3.969 1.00 78.53 O
ATOM 5 O5' U B1170 195.775 122.122 1.552 1.00 80.14 O
ATOM 6 C5' U B1170 195.237 121.643 0.303 1.00 80.59 C
ATOM 7 C4' U B1170 196.347 121.123 -0.583 1.00 81.11 C
ATOM 8 O4' U B1170 197.251 122.207 -0.932 1.00 81.77 O
ATOM 9 C3' U B1170 197.235 120.060 0.041 1.00 81.27 C
ATOM 10 O3' U B1170 196.697 118.766 -0.111 1.00 81.65 O
ATOM 11 C2' U B1170 198.532 120.204 -0.739 1.00 82.48 C
ATOM 12 O2' U B1170 198.486 119.495 -1.959 1.00 83.23 O
ATOM 13 C1' U B1170 198.581 121.714 -1.004 1.00 83.07 C
ATOM 14 N1 U B1170 199.420 122.451 -0.038 1.00 84.70 N
ATOM 15 C2 U B1170 200.790 122.545 -0.284 1.00 85.99 C
ATOM 16 O2 U B1170 201.335 122.050 -1.256 1.00 88.37 O
ATOM 17 N3 U B1170 201.499 123.250 0.655 1.00 86.61 N
ATOM 18 C4 U B1170 201.007 123.867 1.781 1.00 85.56 C
ATOM 19 O4 U B1170 201.760 124.545 2.475 1.00 85.61 O
ATOM 20 C5 U B1170 199.602 123.720 1.971 1.00 85.74 C
ATOM 21 C6 U B1170 198.875 123.037 1.081 1.00 85.08 C
ATOM 22 P C B1171 197.028 117.635 0.983 1.00 83.16 P
ATOM 23 OP1 C B1171 196.216 116.418 0.674 1.00 82.58 O
ATOM 24 OP2 C B1171 196.941 118.264 2.323 1.00 84.40 O
ATOM 25 O5' C B1171 198.529 117.270 0.709 1.00 84.32 O
TER
Atoms:
C4: (205.463,125.830,2.650)
N3: (204.832,124.898,1.861)
OP1: (212.474,127.068,0.152)
OP2: (210.475,127.880,1.548)
C2: (205.414,124.045,0.957)
C1': (207.479,123.307,-0.157)
C3': (208.569,124.586,-1.833)
O5': (210.295,125.823,0.115)
O4': (208.875,123.295,0.118)
C5': (210.771,124.631,-0.541)
P: (211.267,126.752,0.977)
C4': (209.602,123.811,-1.027)
C2': (207.291,123.801,-1.596)
O2': (207.136,122.723,-2.499)
N1: (206.795,124.168,0.831)
O4: (204.807,126.455,3.478)
O2: (204.756,123.241,0.321)
C6: (207.484,125.081,1.601)
C5: (206.880,125.894,2.479)
O3': (208.882,124.606,-3.201)
N3: (204.832,124.898,1.861)
OP1: (212.474,127.068,0.152)
OP2: (210.475,127.880,1.548)
C2: (205.414,124.045,0.957)
C1': (207.479,123.307,-0.157)
C3': (208.569,124.586,-1.833)
O5': (210.295,125.823,0.115)
O4': (208.875,123.295,0.118)
C5': (210.771,124.631,-0.541)
P: (211.267,126.752,0.977)
C4': (209.602,123.811,-1.027)
C2': (207.291,123.801,-1.596)
O2': (207.136,122.723,-2.499)
N1: (206.795,124.168,0.831)
O4: (204.807,126.455,3.478)
O2: (204.756,123.241,0.321)
C6: (207.484,125.081,1.601)
C5: (206.880,125.894,2.479)
O3': (208.882,124.606,-3.201)
C4: (201.007,123.867,1.781)
N3: (201.499,123.250,0.655)
OP1: (193.896,121.238,2.913)
OP2: (195.686,122.743,3.969)
C2: (200.790,122.545,-0.284)
C1': (198.581,121.714,-1.004)
C3': (197.235,120.060,0.041)
O5': (195.775,122.122,1.552)
O4': (197.251,122.207,-0.932)
C5': (195.237,121.643,0.303)
P: (194.838,122.394,2.807)
C4': (196.347,121.123,-0.583)
C2': (198.532,120.204,-0.739)
O2': (198.486,119.495,-1.959)
N1: (199.420,122.451,-0.038)
O4: (201.760,124.545,2.475)
O2: (201.335,122.050,-1.256)
C6: (198.875,123.037,1.081)
C5: (199.602,123.720,1.971)
O3': (196.697,118.766,-0.111)
N3: (201.499,123.250,0.655)
OP1: (193.896,121.238,2.913)
OP2: (195.686,122.743,3.969)
C2: (200.790,122.545,-0.284)
C1': (198.581,121.714,-1.004)
C3': (197.235,120.060,0.041)
O5': (195.775,122.122,1.552)
O4': (197.251,122.207,-0.932)
C5': (195.237,121.643,0.303)
P: (194.838,122.394,2.807)
C4': (196.347,121.123,-0.583)
C2': (198.532,120.204,-0.739)
O2': (198.486,119.495,-1.959)
N1: (199.420,122.451,-0.038)
O4: (201.760,124.545,2.475)
O2: (201.335,122.050,-1.256)
C6: (198.875,123.037,1.081)
C5: (199.602,123.720,1.971)
O3': (196.697,118.766,-0.111)
Image (generated by PyMOL):