Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A16:A505
Extra
PDB:
ATOM 1 O3' A A 15 33.069 132.877 66.479 1.00 34.22 O
ATOM 2 P U A 16 32.636 132.330 65.012 1.00 33.66 P
ATOM 3 OP1 U A 16 33.022 130.891 64.936 1.00 32.15 O
ATOM 4 OP2 U A 16 33.073 133.252 63.948 1.00 34.25 O
ATOM 5 O5' U A 16 31.053 132.393 65.052 1.00 32.73 O
ATOM 6 C5' U A 16 30.333 131.617 66.020 1.00 32.99 C
ATOM 7 C4' U A 16 28.854 131.871 65.917 1.00 36.16 C
ATOM 8 O4' U A 16 28.542 133.179 66.439 1.00 36.77 O
ATOM 9 C3' U A 16 28.219 131.824 64.534 1.00 36.21 C
ATOM 10 O3' U A 16 27.869 130.499 64.146 1.00 37.04 O
ATOM 11 C2' U A 16 26.976 132.676 64.726 1.00 36.95 C
ATOM 12 O2' U A 16 25.948 131.977 65.396 1.00 37.90 O
ATOM 13 C1' U A 16 27.496 133.754 65.675 1.00 37.98 C
ATOM 14 N1 U A 16 28.044 134.947 65.020 1.00 40.21 N
ATOM 15 C2 U A 16 27.186 135.909 64.534 1.00 41.16 C
ATOM 16 O2 U A 16 25.974 135.792 64.534 1.00 42.10 O
ATOM 17 N3 U A 16 27.811 137.021 64.029 1.00 42.32 N
ATOM 18 C4 U A 16 29.163 137.254 63.947 1.00 41.85 C
ATOM 19 O4 U A 16 29.569 138.355 63.566 1.00 44.60 O
ATOM 20 C5 U A 16 29.969 136.197 64.419 1.00 40.13 C
ATOM 21 C6 U A 16 29.400 135.109 64.925 1.00 40.77 C
ATOM 22 P U A 17 28.214 129.993 62.665 1.00 39.13 P
ATOM 23 OP1 U A 17 28.096 128.513 62.614 1.00 39.69 O
ATOM 24 OP2 U A 17 29.481 130.635 62.267 1.00 42.53 O
ATOM 25 O5' U A 17 27.054 130.617 61.773 1.00 39.73 O
TER
ATOM 1 O3' A B 504 23.256 146.022 61.390 1.00 46.07 O
ATOM 2 P U B 505 23.172 145.735 62.960 1.00 46.40 P
ATOM 3 OP1 U B 505 21.869 146.175 63.522 1.00 45.30 O
ATOM 4 OP2 U B 505 24.431 146.258 63.545 1.00 46.73 O
ATOM 5 O5' U B 505 23.075 144.155 63.017 1.00 44.62 O
ATOM 6 C5' U B 505 21.821 143.514 62.760 1.00 44.27 C
ATOM 7 C4' U B 505 21.976 142.026 62.855 1.00 44.46 C
ATOM 8 O4' U B 505 23.061 141.638 61.991 1.00 43.63 O
ATOM 9 C3' U B 505 22.375 141.536 64.235 1.00 43.42 C
ATOM 10 O3' U B 505 21.198 141.228 64.962 1.00 42.47 O
ATOM 11 C2' U B 505 23.127 140.255 63.934 1.00 43.66 C
ATOM 12 O2' U B 505 22.222 139.193 63.736 1.00 44.66 O
ATOM 13 C1' U B 505 23.807 140.606 62.608 1.00 44.29 C
ATOM 14 N1 U B 505 25.202 141.050 62.719 1.00 45.02 N
ATOM 15 C2 U B 505 26.173 140.085 62.871 1.00 44.85 C
ATOM 16 O2 U B 505 25.927 138.901 62.940 1.00 44.31 O
ATOM 17 N3 U B 505 27.455 140.561 62.928 1.00 46.02 N
ATOM 18 C4 U B 505 27.862 141.878 62.841 1.00 46.54 C
ATOM 19 O4 U B 505 29.066 142.138 62.811 1.00 47.09 O
ATOM 20 C5 U B 505 26.801 142.822 62.699 1.00 46.09 C
ATOM 21 C6 U B 505 25.538 142.389 62.650 1.00 46.42 C
ATOM 22 P G B 506 20.918 141.929 66.367 1.00 43.69 P
ATOM 23 OP1 G B 506 19.762 141.169 66.917 1.00 42.86 O
ATOM 24 OP2 G B 506 20.806 143.390 66.170 1.00 43.54 O
ATOM 25 O5' G B 506 22.237 141.650 67.215 1.00 41.47 O
TER
ATOM 2 P U A 16 32.636 132.330 65.012 1.00 33.66 P
ATOM 3 OP1 U A 16 33.022 130.891 64.936 1.00 32.15 O
ATOM 4 OP2 U A 16 33.073 133.252 63.948 1.00 34.25 O
ATOM 5 O5' U A 16 31.053 132.393 65.052 1.00 32.73 O
ATOM 6 C5' U A 16 30.333 131.617 66.020 1.00 32.99 C
ATOM 7 C4' U A 16 28.854 131.871 65.917 1.00 36.16 C
ATOM 8 O4' U A 16 28.542 133.179 66.439 1.00 36.77 O
ATOM 9 C3' U A 16 28.219 131.824 64.534 1.00 36.21 C
ATOM 10 O3' U A 16 27.869 130.499 64.146 1.00 37.04 O
ATOM 11 C2' U A 16 26.976 132.676 64.726 1.00 36.95 C
ATOM 12 O2' U A 16 25.948 131.977 65.396 1.00 37.90 O
ATOM 13 C1' U A 16 27.496 133.754 65.675 1.00 37.98 C
ATOM 14 N1 U A 16 28.044 134.947 65.020 1.00 40.21 N
ATOM 15 C2 U A 16 27.186 135.909 64.534 1.00 41.16 C
ATOM 16 O2 U A 16 25.974 135.792 64.534 1.00 42.10 O
ATOM 17 N3 U A 16 27.811 137.021 64.029 1.00 42.32 N
ATOM 18 C4 U A 16 29.163 137.254 63.947 1.00 41.85 C
ATOM 19 O4 U A 16 29.569 138.355 63.566 1.00 44.60 O
ATOM 20 C5 U A 16 29.969 136.197 64.419 1.00 40.13 C
ATOM 21 C6 U A 16 29.400 135.109 64.925 1.00 40.77 C
ATOM 22 P U A 17 28.214 129.993 62.665 1.00 39.13 P
ATOM 23 OP1 U A 17 28.096 128.513 62.614 1.00 39.69 O
ATOM 24 OP2 U A 17 29.481 130.635 62.267 1.00 42.53 O
ATOM 25 O5' U A 17 27.054 130.617 61.773 1.00 39.73 O
TER
ATOM 1 O3' A B 504 23.256 146.022 61.390 1.00 46.07 O
ATOM 2 P U B 505 23.172 145.735 62.960 1.00 46.40 P
ATOM 3 OP1 U B 505 21.869 146.175 63.522 1.00 45.30 O
ATOM 4 OP2 U B 505 24.431 146.258 63.545 1.00 46.73 O
ATOM 5 O5' U B 505 23.075 144.155 63.017 1.00 44.62 O
ATOM 6 C5' U B 505 21.821 143.514 62.760 1.00 44.27 C
ATOM 7 C4' U B 505 21.976 142.026 62.855 1.00 44.46 C
ATOM 8 O4' U B 505 23.061 141.638 61.991 1.00 43.63 O
ATOM 9 C3' U B 505 22.375 141.536 64.235 1.00 43.42 C
ATOM 10 O3' U B 505 21.198 141.228 64.962 1.00 42.47 O
ATOM 11 C2' U B 505 23.127 140.255 63.934 1.00 43.66 C
ATOM 12 O2' U B 505 22.222 139.193 63.736 1.00 44.66 O
ATOM 13 C1' U B 505 23.807 140.606 62.608 1.00 44.29 C
ATOM 14 N1 U B 505 25.202 141.050 62.719 1.00 45.02 N
ATOM 15 C2 U B 505 26.173 140.085 62.871 1.00 44.85 C
ATOM 16 O2 U B 505 25.927 138.901 62.940 1.00 44.31 O
ATOM 17 N3 U B 505 27.455 140.561 62.928 1.00 46.02 N
ATOM 18 C4 U B 505 27.862 141.878 62.841 1.00 46.54 C
ATOM 19 O4 U B 505 29.066 142.138 62.811 1.00 47.09 O
ATOM 20 C5 U B 505 26.801 142.822 62.699 1.00 46.09 C
ATOM 21 C6 U B 505 25.538 142.389 62.650 1.00 46.42 C
ATOM 22 P G B 506 20.918 141.929 66.367 1.00 43.69 P
ATOM 23 OP1 G B 506 19.762 141.169 66.917 1.00 42.86 O
ATOM 24 OP2 G B 506 20.806 143.390 66.170 1.00 43.54 O
ATOM 25 O5' G B 506 22.237 141.650 67.215 1.00 41.47 O
TER
Atoms:
C4: (29.163,137.254,63.947)
N3: (27.811,137.021,64.029)
OP1: (33.022,130.891,64.936)
OP2: (33.073,133.252,63.948)
C2: (27.186,135.909,64.534)
C1': (27.496,133.754,65.675)
C3': (28.219,131.824,64.534)
O5': (31.053,132.393,65.052)
O4': (28.542,133.179,66.439)
C5': (30.333,131.617,66.020)
P: (32.636,132.330,65.012)
C4': (28.854,131.871,65.917)
C2': (26.976,132.676,64.726)
O2': (25.948,131.977,65.396)
N1: (28.044,134.947,65.020)
O4: (29.569,138.355,63.566)
O2: (25.974,135.792,64.534)
C6: (29.400,135.109,64.925)
C5: (29.969,136.197,64.419)
O3': (27.869,130.499,64.146)
N3: (27.811,137.021,64.029)
OP1: (33.022,130.891,64.936)
OP2: (33.073,133.252,63.948)
C2: (27.186,135.909,64.534)
C1': (27.496,133.754,65.675)
C3': (28.219,131.824,64.534)
O5': (31.053,132.393,65.052)
O4': (28.542,133.179,66.439)
C5': (30.333,131.617,66.020)
P: (32.636,132.330,65.012)
C4': (28.854,131.871,65.917)
C2': (26.976,132.676,64.726)
O2': (25.948,131.977,65.396)
N1: (28.044,134.947,65.020)
O4: (29.569,138.355,63.566)
O2: (25.974,135.792,64.534)
C6: (29.400,135.109,64.925)
C5: (29.969,136.197,64.419)
O3': (27.869,130.499,64.146)
C4: (27.862,141.878,62.841)
N3: (27.455,140.561,62.928)
OP1: (21.869,146.175,63.522)
OP2: (24.431,146.258,63.545)
C2: (26.173,140.085,62.871)
C1': (23.807,140.606,62.608)
C3': (22.375,141.536,64.235)
O5': (23.075,144.155,63.017)
O4': (23.061,141.638,61.991)
C5': (21.821,143.514,62.760)
P: (23.172,145.735,62.960)
C4': (21.976,142.026,62.855)
C2': (23.127,140.255,63.934)
O2': (22.222,139.193,63.736)
N1: (25.202,141.050,62.719)
O4: (29.066,142.138,62.811)
O2: (25.927,138.901,62.940)
C6: (25.538,142.389,62.650)
C5: (26.801,142.822,62.699)
O3': (21.198,141.228,64.962)
N3: (27.455,140.561,62.928)
OP1: (21.869,146.175,63.522)
OP2: (24.431,146.258,63.545)
C2: (26.173,140.085,62.871)
C1': (23.807,140.606,62.608)
C3': (22.375,141.536,64.235)
O5': (23.075,144.155,63.017)
O4': (23.061,141.638,61.991)
C5': (21.821,143.514,62.760)
P: (23.172,145.735,62.960)
C4': (21.976,142.026,62.855)
C2': (23.127,140.255,63.934)
O2': (22.222,139.193,63.736)
N1: (25.202,141.050,62.719)
O4: (29.066,142.138,62.811)
O2: (25.927,138.901,62.940)
C6: (25.538,142.389,62.650)
C5: (26.801,142.822,62.699)
O3': (21.198,141.228,64.962)
Image (generated by PyMOL):