Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02387:02451
Extra
PDB:
ATOM 1 O3' U A2386 70.592 137.738 118.770 1.00 30.88 O
ATOM 2 P U A2387 69.698 137.732 120.111 1.00 31.62 P
ATOM 3 OP1 U A2387 70.330 138.643 121.089 1.00 33.93 O
ATOM 4 OP2 U A2387 69.425 136.331 120.495 1.00 31.25 O
ATOM 5 O5' U A2387 68.317 138.388 119.680 1.00 31.21 O
ATOM 6 C5' U A2387 68.272 139.672 119.047 1.00 30.43 C
ATOM 7 C4' U A2387 67.064 139.745 118.153 1.00 31.46 C
ATOM 8 O4' U A2387 67.166 138.711 117.145 1.00 31.55 O
ATOM 9 C3' U A2387 65.748 139.464 118.856 1.00 31.06 C
ATOM 10 O3' U A2387 65.242 140.671 119.417 1.00 32.69 O
ATOM 11 C2' U A2387 64.865 138.951 117.726 1.00 29.85 C
ATOM 12 O2' U A2387 64.313 140.001 116.969 1.00 27.54 O
ATOM 13 C1' U A2387 65.879 138.195 116.864 1.00 30.82 C
ATOM 14 N1 U A2387 65.915 136.737 117.047 1.00 31.66 N
ATOM 15 C2 U A2387 65.094 135.964 116.242 1.00 31.42 C
ATOM 16 O2 U A2387 64.332 136.441 115.415 1.00 32.86 O
ATOM 17 N3 U A2387 65.201 134.612 116.436 1.00 29.24 N
ATOM 18 C4 U A2387 66.026 133.967 117.328 1.00 29.18 C
ATOM 19 O4 U A2387 66.076 132.741 117.322 1.00 29.38 O
ATOM 20 C5 U A2387 66.827 134.830 118.136 1.00 30.49 C
ATOM 21 C6 U A2387 66.746 136.153 117.973 1.00 31.31 C
ATOM 22 P C A2388 64.461 140.639 120.813 1.00 30.71 P
ATOM 23 OP1 C A2388 64.155 142.044 121.158 1.00 30.70 O
ATOM 24 OP2 C A2388 65.247 139.803 121.750 1.00 32.94 O
ATOM 25 O5' C A2388 63.098 139.880 120.494 1.00 31.96 O
TER
ATOM 1 O3' G B2450 60.961 126.096 112.279 1.00 29.38 O
ATOM 2 P U B2451 62.052 126.581 111.220 1.00 29.21 P
ATOM 3 OP1 U B2451 61.568 126.196 109.871 1.00 31.68 O
ATOM 4 OP2 U B2451 63.366 126.090 111.694 1.00 28.39 O
ATOM 5 O5' U B2451 62.019 128.168 111.342 1.00 28.30 O
ATOM 6 C5' U B2451 60.837 128.925 111.006 1.00 28.69 C
ATOM 7 C4' U B2451 61.005 130.362 111.446 1.00 30.73 C
ATOM 8 O4' U B2451 61.171 130.382 112.886 1.00 32.65 O
ATOM 9 C3' U B2451 62.233 131.079 110.895 1.00 30.25 C
ATOM 10 O3' U B2451 61.913 131.741 109.665 1.00 30.90 O
ATOM 11 C2' U B2451 62.526 132.116 111.975 1.00 31.28 C
ATOM 12 O2' U B2451 61.726 133.272 111.847 1.00 31.49 O
ATOM 13 C1' U B2451 62.108 131.377 113.251 1.00 30.93 C
ATOM 14 N1 U B2451 63.194 130.743 114.018 1.00 31.56 N
ATOM 15 C2 U B2451 63.820 131.493 115.002 1.00 31.28 C
ATOM 16 O2 U B2451 63.517 132.643 115.254 1.00 32.65 O
ATOM 17 N3 U B2451 64.815 130.839 115.686 1.00 30.45 N
ATOM 18 C4 U B2451 65.239 129.542 115.493 1.00 33.14 C
ATOM 19 O4 U B2451 66.131 129.085 116.203 1.00 32.20 O
ATOM 20 C5 U B2451 64.547 128.834 114.456 1.00 32.50 C
ATOM 21 C6 U B2451 63.576 129.442 113.773 1.00 31.93 C
ATOM 22 P G B2452 62.472 131.185 108.259 1.00 30.34 P
ATOM 23 OP1 G B2452 61.423 131.513 107.262 1.00 31.12 O
ATOM 24 OP2 G B2452 62.925 129.792 108.394 1.00 30.21 O
ATOM 25 O5' G B2452 63.753 132.084 107.941 1.00 29.39 O
TER
ATOM 2 P U A2387 69.698 137.732 120.111 1.00 31.62 P
ATOM 3 OP1 U A2387 70.330 138.643 121.089 1.00 33.93 O
ATOM 4 OP2 U A2387 69.425 136.331 120.495 1.00 31.25 O
ATOM 5 O5' U A2387 68.317 138.388 119.680 1.00 31.21 O
ATOM 6 C5' U A2387 68.272 139.672 119.047 1.00 30.43 C
ATOM 7 C4' U A2387 67.064 139.745 118.153 1.00 31.46 C
ATOM 8 O4' U A2387 67.166 138.711 117.145 1.00 31.55 O
ATOM 9 C3' U A2387 65.748 139.464 118.856 1.00 31.06 C
ATOM 10 O3' U A2387 65.242 140.671 119.417 1.00 32.69 O
ATOM 11 C2' U A2387 64.865 138.951 117.726 1.00 29.85 C
ATOM 12 O2' U A2387 64.313 140.001 116.969 1.00 27.54 O
ATOM 13 C1' U A2387 65.879 138.195 116.864 1.00 30.82 C
ATOM 14 N1 U A2387 65.915 136.737 117.047 1.00 31.66 N
ATOM 15 C2 U A2387 65.094 135.964 116.242 1.00 31.42 C
ATOM 16 O2 U A2387 64.332 136.441 115.415 1.00 32.86 O
ATOM 17 N3 U A2387 65.201 134.612 116.436 1.00 29.24 N
ATOM 18 C4 U A2387 66.026 133.967 117.328 1.00 29.18 C
ATOM 19 O4 U A2387 66.076 132.741 117.322 1.00 29.38 O
ATOM 20 C5 U A2387 66.827 134.830 118.136 1.00 30.49 C
ATOM 21 C6 U A2387 66.746 136.153 117.973 1.00 31.31 C
ATOM 22 P C A2388 64.461 140.639 120.813 1.00 30.71 P
ATOM 23 OP1 C A2388 64.155 142.044 121.158 1.00 30.70 O
ATOM 24 OP2 C A2388 65.247 139.803 121.750 1.00 32.94 O
ATOM 25 O5' C A2388 63.098 139.880 120.494 1.00 31.96 O
TER
ATOM 1 O3' G B2450 60.961 126.096 112.279 1.00 29.38 O
ATOM 2 P U B2451 62.052 126.581 111.220 1.00 29.21 P
ATOM 3 OP1 U B2451 61.568 126.196 109.871 1.00 31.68 O
ATOM 4 OP2 U B2451 63.366 126.090 111.694 1.00 28.39 O
ATOM 5 O5' U B2451 62.019 128.168 111.342 1.00 28.30 O
ATOM 6 C5' U B2451 60.837 128.925 111.006 1.00 28.69 C
ATOM 7 C4' U B2451 61.005 130.362 111.446 1.00 30.73 C
ATOM 8 O4' U B2451 61.171 130.382 112.886 1.00 32.65 O
ATOM 9 C3' U B2451 62.233 131.079 110.895 1.00 30.25 C
ATOM 10 O3' U B2451 61.913 131.741 109.665 1.00 30.90 O
ATOM 11 C2' U B2451 62.526 132.116 111.975 1.00 31.28 C
ATOM 12 O2' U B2451 61.726 133.272 111.847 1.00 31.49 O
ATOM 13 C1' U B2451 62.108 131.377 113.251 1.00 30.93 C
ATOM 14 N1 U B2451 63.194 130.743 114.018 1.00 31.56 N
ATOM 15 C2 U B2451 63.820 131.493 115.002 1.00 31.28 C
ATOM 16 O2 U B2451 63.517 132.643 115.254 1.00 32.65 O
ATOM 17 N3 U B2451 64.815 130.839 115.686 1.00 30.45 N
ATOM 18 C4 U B2451 65.239 129.542 115.493 1.00 33.14 C
ATOM 19 O4 U B2451 66.131 129.085 116.203 1.00 32.20 O
ATOM 20 C5 U B2451 64.547 128.834 114.456 1.00 32.50 C
ATOM 21 C6 U B2451 63.576 129.442 113.773 1.00 31.93 C
ATOM 22 P G B2452 62.472 131.185 108.259 1.00 30.34 P
ATOM 23 OP1 G B2452 61.423 131.513 107.262 1.00 31.12 O
ATOM 24 OP2 G B2452 62.925 129.792 108.394 1.00 30.21 O
ATOM 25 O5' G B2452 63.753 132.084 107.941 1.00 29.39 O
TER
Atoms:
C4: (66.026,133.967,117.328)
N3: (65.201,134.612,116.436)
OP1: (70.330,138.643,121.089)
OP2: (69.425,136.331,120.495)
C2: (65.094,135.964,116.242)
C1': (65.879,138.195,116.864)
C3': (65.748,139.464,118.856)
O5': (68.317,138.388,119.680)
O4': (67.166,138.711,117.145)
C5': (68.272,139.672,119.047)
P: (69.698,137.732,120.111)
C4': (67.064,139.745,118.153)
C2': (64.865,138.951,117.726)
O2': (64.313,140.001,116.969)
N1: (65.915,136.737,117.047)
O4: (66.076,132.741,117.322)
O2: (64.332,136.441,115.415)
C6: (66.746,136.153,117.973)
C5: (66.827,134.830,118.136)
O3': (65.242,140.671,119.417)
N3: (65.201,134.612,116.436)
OP1: (70.330,138.643,121.089)
OP2: (69.425,136.331,120.495)
C2: (65.094,135.964,116.242)
C1': (65.879,138.195,116.864)
C3': (65.748,139.464,118.856)
O5': (68.317,138.388,119.680)
O4': (67.166,138.711,117.145)
C5': (68.272,139.672,119.047)
P: (69.698,137.732,120.111)
C4': (67.064,139.745,118.153)
C2': (64.865,138.951,117.726)
O2': (64.313,140.001,116.969)
N1: (65.915,136.737,117.047)
O4: (66.076,132.741,117.322)
O2: (64.332,136.441,115.415)
C6: (66.746,136.153,117.973)
C5: (66.827,134.830,118.136)
O3': (65.242,140.671,119.417)
C4: (65.239,129.542,115.493)
N3: (64.815,130.839,115.686)
OP1: (61.568,126.196,109.871)
OP2: (63.366,126.090,111.694)
C2: (63.820,131.493,115.002)
C1': (62.108,131.377,113.251)
C3': (62.233,131.079,110.895)
O5': (62.019,128.168,111.342)
O4': (61.171,130.382,112.886)
C5': (60.837,128.925,111.006)
P: (62.052,126.581,111.220)
C4': (61.005,130.362,111.446)
C2': (62.526,132.116,111.975)
O2': (61.726,133.272,111.847)
N1: (63.194,130.743,114.018)
O4: (66.131,129.085,116.203)
O2: (63.517,132.643,115.254)
C6: (63.576,129.442,113.773)
C5: (64.547,128.834,114.456)
O3': (61.913,131.741,109.665)
N3: (64.815,130.839,115.686)
OP1: (61.568,126.196,109.871)
OP2: (63.366,126.090,111.694)
C2: (63.820,131.493,115.002)
C1': (62.108,131.377,113.251)
C3': (62.233,131.079,110.895)
O5': (62.019,128.168,111.342)
O4': (61.171,130.382,112.886)
C5': (60.837,128.925,111.006)
P: (62.052,126.581,111.220)
C4': (61.005,130.362,111.446)
C2': (62.526,132.116,111.975)
O2': (61.726,133.272,111.847)
N1: (63.194,130.743,114.018)
O4: (66.131,129.085,116.203)
O2: (63.517,132.643,115.254)
C6: (63.576,129.442,113.773)
C5: (64.547,128.834,114.456)
O3': (61.913,131.741,109.665)
Image (generated by PyMOL):