Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1849:A1879
Extra
PDB:
ATOM 1 O3' U A1848 -85.042 -20.271 64.750 1.00 8.48 O
ATOM 2 P U A1849 -86.065 -20.535 65.951 1.00 19.43 P
ATOM 3 OP1 U A1849 -85.251 -20.761 67.167 1.00 19.43 O
ATOM 4 OP2 U A1849 -87.023 -21.599 65.512 1.00 19.43 O
ATOM 5 O5' U A1849 -86.837 -19.149 66.049 1.00 19.43 O
ATOM 6 C5' U A1849 -86.257 -17.985 66.630 1.00 19.43 C
ATOM 7 C4' U A1849 -87.269 -16.867 66.657 1.00 19.43 C
ATOM 8 O4' U A1849 -87.726 -16.620 65.307 1.00 19.43 O
ATOM 9 C3' U A1849 -88.537 -17.165 67.450 1.00 19.43 C
ATOM 10 O3' U A1849 -88.420 -16.803 68.807 1.00 19.43 O
ATOM 11 C2' U A1849 -89.629 -16.404 66.720 1.00 19.43 C
ATOM 12 O2' U A1849 -89.753 -15.089 67.232 1.00 19.43 O
ATOM 13 C1' U A1849 -89.094 -16.324 65.292 1.00 19.43 C
ATOM 14 N1 U A1849 -89.769 -17.250 64.374 1.00 19.37 N
ATOM 15 C2 U A1849 -90.864 -16.727 63.758 1.00 19.37 C
ATOM 16 O2 U A1849 -91.257 -15.610 63.993 1.00 19.37 O
ATOM 17 N3 U A1849 -91.508 -17.527 62.872 1.00 19.37 N
ATOM 18 C4 U A1849 -91.173 -18.796 62.521 1.00 19.37 C
ATOM 19 O4 U A1849 -91.892 -19.367 61.695 1.00 19.37 O
ATOM 20 C5 U A1849 -89.998 -19.284 63.185 1.00 19.37 C
ATOM 21 C6 U A1849 -89.344 -18.503 64.061 1.00 19.37 C
ATOM 22 P G A1850 -89.087 -17.712 69.943 1.00 33.10 P
ATOM 23 OP1 G A1850 -89.042 -16.948 71.198 1.00 33.10 O
ATOM 24 OP2 G A1850 -88.420 -19.037 69.893 1.00 33.10 O
ATOM 25 O5' G A1850 -90.587 -17.839 69.447 1.00 33.10 O
TER
ATOM 1 O3' A B1878 -100.103 -12.717 60.283 1.00 28.09 O
ATOM 2 P U B1879 -99.306 -12.343 58.944 1.00 23.24 P
ATOM 3 OP1 U B1879 -100.204 -11.481 58.135 1.00 23.24 O
ATOM 4 OP2 U B1879 -98.811 -13.614 58.345 1.00 23.24 O
ATOM 5 O5' U B1879 -98.089 -11.493 59.520 1.00 23.24 O
ATOM 6 C5' U B1879 -98.340 -10.398 60.382 1.00 23.24 C
ATOM 7 C4' U B1879 -97.256 -10.221 61.409 1.00 23.24 C
ATOM 8 O4' U B1879 -97.218 -11.352 62.297 1.00 23.24 O
ATOM 9 C3' U B1879 -95.841 -10.141 60.891 1.00 23.24 C
ATOM 10 O3' U B1879 -95.543 -8.897 60.330 1.00 23.24 O
ATOM 11 C2' U B1879 -95.032 -10.443 62.131 1.00 23.24 C
ATOM 12 O2' U B1879 -94.946 -9.304 62.956 1.00 23.24 O
ATOM 13 C1' U B1879 -95.914 -11.478 62.825 1.00 23.24 C
ATOM 14 N1 U B1879 -95.435 -12.826 62.585 1.00 23.06 N
ATOM 15 C2 U B1879 -94.241 -13.113 63.186 1.00 23.06 C
ATOM 16 O2 U B1879 -93.662 -12.301 63.879 1.00 23.06 O
ATOM 17 N3 U B1879 -93.765 -14.370 62.939 1.00 23.06 N
ATOM 18 C4 U B1879 -94.367 -15.328 62.163 1.00 23.06 C
ATOM 19 O4 U B1879 -93.839 -16.422 62.030 1.00 23.06 O
ATOM 20 C5 U B1879 -95.608 -14.932 61.571 1.00 23.06 C
ATOM 21 C6 U B1879 -96.094 -13.707 61.790 1.00 23.06 C
ATOM 22 P C B1880 -94.845 -8.828 58.899 1.00 21.79 P
ATOM 23 OP1 C B1880 -94.948 -7.424 58.437 1.00 21.79 O
ATOM 24 OP2 C B1880 -95.449 -9.897 58.063 1.00 21.79 O
ATOM 25 O5' C B1880 -93.333 -9.177 59.241 1.00 21.79 O
TER
ATOM 2 P U A1849 -86.065 -20.535 65.951 1.00 19.43 P
ATOM 3 OP1 U A1849 -85.251 -20.761 67.167 1.00 19.43 O
ATOM 4 OP2 U A1849 -87.023 -21.599 65.512 1.00 19.43 O
ATOM 5 O5' U A1849 -86.837 -19.149 66.049 1.00 19.43 O
ATOM 6 C5' U A1849 -86.257 -17.985 66.630 1.00 19.43 C
ATOM 7 C4' U A1849 -87.269 -16.867 66.657 1.00 19.43 C
ATOM 8 O4' U A1849 -87.726 -16.620 65.307 1.00 19.43 O
ATOM 9 C3' U A1849 -88.537 -17.165 67.450 1.00 19.43 C
ATOM 10 O3' U A1849 -88.420 -16.803 68.807 1.00 19.43 O
ATOM 11 C2' U A1849 -89.629 -16.404 66.720 1.00 19.43 C
ATOM 12 O2' U A1849 -89.753 -15.089 67.232 1.00 19.43 O
ATOM 13 C1' U A1849 -89.094 -16.324 65.292 1.00 19.43 C
ATOM 14 N1 U A1849 -89.769 -17.250 64.374 1.00 19.37 N
ATOM 15 C2 U A1849 -90.864 -16.727 63.758 1.00 19.37 C
ATOM 16 O2 U A1849 -91.257 -15.610 63.993 1.00 19.37 O
ATOM 17 N3 U A1849 -91.508 -17.527 62.872 1.00 19.37 N
ATOM 18 C4 U A1849 -91.173 -18.796 62.521 1.00 19.37 C
ATOM 19 O4 U A1849 -91.892 -19.367 61.695 1.00 19.37 O
ATOM 20 C5 U A1849 -89.998 -19.284 63.185 1.00 19.37 C
ATOM 21 C6 U A1849 -89.344 -18.503 64.061 1.00 19.37 C
ATOM 22 P G A1850 -89.087 -17.712 69.943 1.00 33.10 P
ATOM 23 OP1 G A1850 -89.042 -16.948 71.198 1.00 33.10 O
ATOM 24 OP2 G A1850 -88.420 -19.037 69.893 1.00 33.10 O
ATOM 25 O5' G A1850 -90.587 -17.839 69.447 1.00 33.10 O
TER
ATOM 1 O3' A B1878 -100.103 -12.717 60.283 1.00 28.09 O
ATOM 2 P U B1879 -99.306 -12.343 58.944 1.00 23.24 P
ATOM 3 OP1 U B1879 -100.204 -11.481 58.135 1.00 23.24 O
ATOM 4 OP2 U B1879 -98.811 -13.614 58.345 1.00 23.24 O
ATOM 5 O5' U B1879 -98.089 -11.493 59.520 1.00 23.24 O
ATOM 6 C5' U B1879 -98.340 -10.398 60.382 1.00 23.24 C
ATOM 7 C4' U B1879 -97.256 -10.221 61.409 1.00 23.24 C
ATOM 8 O4' U B1879 -97.218 -11.352 62.297 1.00 23.24 O
ATOM 9 C3' U B1879 -95.841 -10.141 60.891 1.00 23.24 C
ATOM 10 O3' U B1879 -95.543 -8.897 60.330 1.00 23.24 O
ATOM 11 C2' U B1879 -95.032 -10.443 62.131 1.00 23.24 C
ATOM 12 O2' U B1879 -94.946 -9.304 62.956 1.00 23.24 O
ATOM 13 C1' U B1879 -95.914 -11.478 62.825 1.00 23.24 C
ATOM 14 N1 U B1879 -95.435 -12.826 62.585 1.00 23.06 N
ATOM 15 C2 U B1879 -94.241 -13.113 63.186 1.00 23.06 C
ATOM 16 O2 U B1879 -93.662 -12.301 63.879 1.00 23.06 O
ATOM 17 N3 U B1879 -93.765 -14.370 62.939 1.00 23.06 N
ATOM 18 C4 U B1879 -94.367 -15.328 62.163 1.00 23.06 C
ATOM 19 O4 U B1879 -93.839 -16.422 62.030 1.00 23.06 O
ATOM 20 C5 U B1879 -95.608 -14.932 61.571 1.00 23.06 C
ATOM 21 C6 U B1879 -96.094 -13.707 61.790 1.00 23.06 C
ATOM 22 P C B1880 -94.845 -8.828 58.899 1.00 21.79 P
ATOM 23 OP1 C B1880 -94.948 -7.424 58.437 1.00 21.79 O
ATOM 24 OP2 C B1880 -95.449 -9.897 58.063 1.00 21.79 O
ATOM 25 O5' C B1880 -93.333 -9.177 59.241 1.00 21.79 O
TER
Atoms:
C4: (-91.173,-18.796,62.521)
N3: (-91.508,-17.527,62.872)
OP1: (-85.251,-20.761,67.167)
OP2: (-87.023,-21.599,65.512)
C2: (-90.864,-16.727,63.758)
C1': (-89.094,-16.324,65.292)
C3': (-88.537,-17.165,67.450)
O5': (-86.837,-19.149,66.049)
O4': (-87.726,-16.620,65.307)
C5': (-86.257,-17.985,66.630)
P: (-86.065,-20.535,65.951)
C4': (-87.269,-16.867,66.657)
C2': (-89.629,-16.404,66.720)
O2': (-89.753,-15.089,67.232)
N1: (-89.769,-17.250,64.374)
O4: (-91.892,-19.367,61.695)
O2: (-91.257,-15.610,63.993)
C6: (-89.344,-18.503,64.061)
C5: (-89.998,-19.284,63.185)
O3': (-88.420,-16.803,68.807)
N3: (-91.508,-17.527,62.872)
OP1: (-85.251,-20.761,67.167)
OP2: (-87.023,-21.599,65.512)
C2: (-90.864,-16.727,63.758)
C1': (-89.094,-16.324,65.292)
C3': (-88.537,-17.165,67.450)
O5': (-86.837,-19.149,66.049)
O4': (-87.726,-16.620,65.307)
C5': (-86.257,-17.985,66.630)
P: (-86.065,-20.535,65.951)
C4': (-87.269,-16.867,66.657)
C2': (-89.629,-16.404,66.720)
O2': (-89.753,-15.089,67.232)
N1: (-89.769,-17.250,64.374)
O4: (-91.892,-19.367,61.695)
O2: (-91.257,-15.610,63.993)
C6: (-89.344,-18.503,64.061)
C5: (-89.998,-19.284,63.185)
O3': (-88.420,-16.803,68.807)
C4: (-94.367,-15.328,62.163)
N3: (-93.765,-14.370,62.939)
OP1: (-100.204,-11.481,58.135)
OP2: (-98.811,-13.614,58.345)
C2: (-94.241,-13.113,63.186)
C1': (-95.914,-11.478,62.825)
C3': (-95.841,-10.141,60.891)
O5': (-98.089,-11.493,59.520)
O4': (-97.218,-11.352,62.297)
C5': (-98.340,-10.398,60.382)
P: (-99.306,-12.343,58.944)
C4': (-97.256,-10.221,61.409)
C2': (-95.032,-10.443,62.131)
O2': (-94.946,-9.304,62.956)
N1: (-95.435,-12.826,62.585)
O4: (-93.839,-16.422,62.030)
O2: (-93.662,-12.301,63.879)
C6: (-96.094,-13.707,61.790)
C5: (-95.608,-14.932,61.571)
O3': (-95.543,-8.897,60.330)
N3: (-93.765,-14.370,62.939)
OP1: (-100.204,-11.481,58.135)
OP2: (-98.811,-13.614,58.345)
C2: (-94.241,-13.113,63.186)
C1': (-95.914,-11.478,62.825)
C3': (-95.841,-10.141,60.891)
O5': (-98.089,-11.493,59.520)
O4': (-97.218,-11.352,62.297)
C5': (-98.340,-10.398,60.382)
P: (-99.306,-12.343,58.944)
C4': (-97.256,-10.221,61.409)
C2': (-95.032,-10.443,62.131)
O2': (-94.946,-9.304,62.956)
N1: (-95.435,-12.826,62.585)
O4: (-93.839,-16.422,62.030)
O2: (-93.662,-12.301,63.879)
C6: (-96.094,-13.707,61.790)
C5: (-95.608,-14.932,61.571)
O3': (-95.543,-8.897,60.330)
Image (generated by PyMOL):