Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B69:B110
Extra
PDB:
ATOM 1 O3' U A 68 55.615 46.522 112.413 1.00 57.57 O
ATOM 2 P U A 69 54.269 47.363 112.641 1.00 57.80 P
ATOM 3 OP1 U A 69 54.243 48.395 111.582 1.00 56.23 O
ATOM 4 OP2 U A 69 54.211 47.765 114.062 1.00 57.58 O
ATOM 5 O5' U A 69 53.096 46.315 112.393 1.00 58.07 O
ATOM 6 C5' U A 69 52.800 45.835 111.082 1.00 61.34 C
ATOM 7 C4' U A 69 51.534 45.012 111.101 1.00 65.25 C
ATOM 8 O4' U A 69 51.719 43.834 111.940 1.00 67.66 O
ATOM 9 C3' U A 69 50.291 45.653 111.687 1.00 67.49 C
ATOM 10 O3' U A 69 49.668 46.574 110.795 1.00 69.08 O
ATOM 11 C2' U A 69 49.426 44.427 111.951 1.00 67.41 C
ATOM 12 O2' U A 69 48.932 43.958 110.709 1.00 67.23 O
ATOM 13 C1' U A 69 50.466 43.432 112.491 1.00 67.16 C
ATOM 14 N1 U A 69 50.614 43.282 113.963 1.00 66.75 N
ATOM 15 C2 U A 69 49.727 42.446 114.655 1.00 66.78 C
ATOM 16 O2 U A 69 48.817 41.846 114.118 1.00 66.21 O
ATOM 17 N3 U A 69 49.956 42.334 116.011 1.00 67.38 N
ATOM 18 C4 U A 69 50.949 42.947 116.746 1.00 68.61 C
ATOM 19 O4 U A 69 50.995 42.774 117.971 1.00 70.34 O
ATOM 20 C5 U A 69 51.818 43.791 115.981 1.00 68.37 C
ATOM 21 C6 U A 69 51.626 43.931 114.654 1.00 67.70 C
ATOM 22 P C A 70 48.875 47.844 111.400 1.00 71.57 P
ATOM 23 OP1 C A 70 48.472 48.712 110.257 1.00 70.97 O
ATOM 24 OP2 C A 70 49.718 48.416 112.491 1.00 70.08 O
ATOM 25 O5' C A 70 47.567 47.221 112.096 1.00 73.19 O
TER
ATOM 1 O3' G B 109 44.586 36.835 123.659 1.00 80.94 O
ATOM 2 P U B 110 45.695 35.938 122.929 1.00 80.18 P
ATOM 3 OP1 U B 110 45.192 34.549 122.834 1.00 79.77 O
ATOM 4 OP2 U B 110 47.001 36.214 123.596 1.00 79.58 O
ATOM 5 O5' U B 110 45.701 36.514 121.453 1.00 78.30 O
ATOM 6 C5' U B 110 44.466 36.626 120.721 1.00 76.36 C
ATOM 7 C4' U B 110 44.700 37.358 119.428 1.00 74.34 C
ATOM 8 O4' U B 110 45.121 38.723 119.690 1.00 73.34 O
ATOM 9 C3' U B 110 45.846 36.786 118.625 1.00 72.28 C
ATOM 10 O3' U B 110 45.434 35.638 117.911 1.00 70.48 O
ATOM 11 C2' U B 110 46.208 37.956 117.732 1.00 72.07 C
ATOM 12 O2' U B 110 45.229 38.079 116.717 1.00 71.03 O
ATOM 13 C1' U B 110 46.073 39.122 118.718 1.00 72.48 C
ATOM 14 N1 U B 110 47.307 39.556 119.411 1.00 73.00 N
ATOM 15 C2 U B 110 48.213 40.327 118.693 1.00 73.48 C
ATOM 16 O2 U B 110 48.071 40.581 117.509 1.00 74.88 O
ATOM 17 N3 U B 110 49.299 40.776 119.407 1.00 72.88 N
ATOM 18 C4 U B 110 49.592 40.525 120.728 1.00 72.97 C
ATOM 19 O4 U B 110 50.624 40.989 121.215 1.00 72.75 O
ATOM 20 C5 U B 110 48.641 39.690 121.403 1.00 73.92 C
ATOM 21 C6 U B 110 47.558 39.242 120.740 1.00 73.65 C
ATOM 22 P U B 111 46.462 34.433 117.720 1.00 69.15 P
ATOM 23 OP1 U B 111 45.830 33.386 116.875 1.00 69.53 O
ATOM 24 OP2 U B 111 46.943 34.089 119.085 1.00 70.01 O
ATOM 25 O5' U B 111 47.641 35.100 116.888 1.00 67.89 O
TER
ATOM 2 P U A 69 54.269 47.363 112.641 1.00 57.80 P
ATOM 3 OP1 U A 69 54.243 48.395 111.582 1.00 56.23 O
ATOM 4 OP2 U A 69 54.211 47.765 114.062 1.00 57.58 O
ATOM 5 O5' U A 69 53.096 46.315 112.393 1.00 58.07 O
ATOM 6 C5' U A 69 52.800 45.835 111.082 1.00 61.34 C
ATOM 7 C4' U A 69 51.534 45.012 111.101 1.00 65.25 C
ATOM 8 O4' U A 69 51.719 43.834 111.940 1.00 67.66 O
ATOM 9 C3' U A 69 50.291 45.653 111.687 1.00 67.49 C
ATOM 10 O3' U A 69 49.668 46.574 110.795 1.00 69.08 O
ATOM 11 C2' U A 69 49.426 44.427 111.951 1.00 67.41 C
ATOM 12 O2' U A 69 48.932 43.958 110.709 1.00 67.23 O
ATOM 13 C1' U A 69 50.466 43.432 112.491 1.00 67.16 C
ATOM 14 N1 U A 69 50.614 43.282 113.963 1.00 66.75 N
ATOM 15 C2 U A 69 49.727 42.446 114.655 1.00 66.78 C
ATOM 16 O2 U A 69 48.817 41.846 114.118 1.00 66.21 O
ATOM 17 N3 U A 69 49.956 42.334 116.011 1.00 67.38 N
ATOM 18 C4 U A 69 50.949 42.947 116.746 1.00 68.61 C
ATOM 19 O4 U A 69 50.995 42.774 117.971 1.00 70.34 O
ATOM 20 C5 U A 69 51.818 43.791 115.981 1.00 68.37 C
ATOM 21 C6 U A 69 51.626 43.931 114.654 1.00 67.70 C
ATOM 22 P C A 70 48.875 47.844 111.400 1.00 71.57 P
ATOM 23 OP1 C A 70 48.472 48.712 110.257 1.00 70.97 O
ATOM 24 OP2 C A 70 49.718 48.416 112.491 1.00 70.08 O
ATOM 25 O5' C A 70 47.567 47.221 112.096 1.00 73.19 O
TER
ATOM 1 O3' G B 109 44.586 36.835 123.659 1.00 80.94 O
ATOM 2 P U B 110 45.695 35.938 122.929 1.00 80.18 P
ATOM 3 OP1 U B 110 45.192 34.549 122.834 1.00 79.77 O
ATOM 4 OP2 U B 110 47.001 36.214 123.596 1.00 79.58 O
ATOM 5 O5' U B 110 45.701 36.514 121.453 1.00 78.30 O
ATOM 6 C5' U B 110 44.466 36.626 120.721 1.00 76.36 C
ATOM 7 C4' U B 110 44.700 37.358 119.428 1.00 74.34 C
ATOM 8 O4' U B 110 45.121 38.723 119.690 1.00 73.34 O
ATOM 9 C3' U B 110 45.846 36.786 118.625 1.00 72.28 C
ATOM 10 O3' U B 110 45.434 35.638 117.911 1.00 70.48 O
ATOM 11 C2' U B 110 46.208 37.956 117.732 1.00 72.07 C
ATOM 12 O2' U B 110 45.229 38.079 116.717 1.00 71.03 O
ATOM 13 C1' U B 110 46.073 39.122 118.718 1.00 72.48 C
ATOM 14 N1 U B 110 47.307 39.556 119.411 1.00 73.00 N
ATOM 15 C2 U B 110 48.213 40.327 118.693 1.00 73.48 C
ATOM 16 O2 U B 110 48.071 40.581 117.509 1.00 74.88 O
ATOM 17 N3 U B 110 49.299 40.776 119.407 1.00 72.88 N
ATOM 18 C4 U B 110 49.592 40.525 120.728 1.00 72.97 C
ATOM 19 O4 U B 110 50.624 40.989 121.215 1.00 72.75 O
ATOM 20 C5 U B 110 48.641 39.690 121.403 1.00 73.92 C
ATOM 21 C6 U B 110 47.558 39.242 120.740 1.00 73.65 C
ATOM 22 P U B 111 46.462 34.433 117.720 1.00 69.15 P
ATOM 23 OP1 U B 111 45.830 33.386 116.875 1.00 69.53 O
ATOM 24 OP2 U B 111 46.943 34.089 119.085 1.00 70.01 O
ATOM 25 O5' U B 111 47.641 35.100 116.888 1.00 67.89 O
TER
Atoms:
C4: (50.949,42.947,116.746)
N3: (49.956,42.334,116.011)
OP1: (54.243,48.395,111.582)
OP2: (54.211,47.765,114.062)
C2: (49.727,42.446,114.655)
C1': (50.466,43.432,112.491)
C3': (50.291,45.653,111.687)
O5': (53.096,46.315,112.393)
O4': (51.719,43.834,111.940)
C5': (52.800,45.835,111.082)
P: (54.269,47.363,112.641)
C4': (51.534,45.012,111.101)
C2': (49.426,44.427,111.951)
O2': (48.932,43.958,110.709)
N1: (50.614,43.282,113.963)
O4: (50.995,42.774,117.971)
O2: (48.817,41.846,114.118)
C6: (51.626,43.931,114.654)
C5: (51.818,43.791,115.981)
O3': (49.668,46.574,110.795)
N3: (49.956,42.334,116.011)
OP1: (54.243,48.395,111.582)
OP2: (54.211,47.765,114.062)
C2: (49.727,42.446,114.655)
C1': (50.466,43.432,112.491)
C3': (50.291,45.653,111.687)
O5': (53.096,46.315,112.393)
O4': (51.719,43.834,111.940)
C5': (52.800,45.835,111.082)
P: (54.269,47.363,112.641)
C4': (51.534,45.012,111.101)
C2': (49.426,44.427,111.951)
O2': (48.932,43.958,110.709)
N1: (50.614,43.282,113.963)
O4: (50.995,42.774,117.971)
O2: (48.817,41.846,114.118)
C6: (51.626,43.931,114.654)
C5: (51.818,43.791,115.981)
O3': (49.668,46.574,110.795)
C4: (49.592,40.525,120.728)
N3: (49.299,40.776,119.407)
OP1: (45.192,34.549,122.834)
OP2: (47.001,36.214,123.596)
C2: (48.213,40.327,118.693)
C1': (46.073,39.122,118.718)
C3': (45.846,36.786,118.625)
O5': (45.701,36.514,121.453)
O4': (45.121,38.723,119.690)
C5': (44.466,36.626,120.721)
P: (45.695,35.938,122.929)
C4': (44.700,37.358,119.428)
C2': (46.208,37.956,117.732)
O2': (45.229,38.079,116.717)
N1: (47.307,39.556,119.411)
O4: (50.624,40.989,121.215)
O2: (48.071,40.581,117.509)
C6: (47.558,39.242,120.740)
C5: (48.641,39.690,121.403)
O3': (45.434,35.638,117.911)
N3: (49.299,40.776,119.407)
OP1: (45.192,34.549,122.834)
OP2: (47.001,36.214,123.596)
C2: (48.213,40.327,118.693)
C1': (46.073,39.122,118.718)
C3': (45.846,36.786,118.625)
O5': (45.701,36.514,121.453)
O4': (45.121,38.723,119.690)
C5': (44.466,36.626,120.721)
P: (45.695,35.938,122.929)
C4': (44.700,37.358,119.428)
C2': (46.208,37.956,117.732)
O2': (45.229,38.079,116.717)
N1: (47.307,39.556,119.411)
O4: (50.624,40.989,121.215)
O2: (48.071,40.581,117.509)
C6: (47.558,39.242,120.740)
C5: (48.641,39.690,121.403)
O3': (45.434,35.638,117.911)
Image (generated by PyMOL):