Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:968:9111
Extra
PDB:
ATOM 1 O3' G A 67 59.715 46.122 116.365 1.00 50.99 O
ATOM 2 P U A 68 58.252 46.795 116.357 1.00 51.64 P
ATOM 3 OP1 U A 68 58.394 48.182 115.869 1.00 52.83 O
ATOM 4 OP2 U A 68 57.618 46.552 117.676 1.00 51.73 O
ATOM 5 O5' U A 68 57.455 45.988 115.237 1.00 50.65 O
ATOM 6 C5' U A 68 57.874 46.038 113.862 1.00 50.59 C
ATOM 7 C4' U A 68 57.033 45.114 113.016 1.00 51.68 C
ATOM 8 O4' U A 68 57.128 43.760 113.530 1.00 52.12 O
ATOM 9 C3' U A 68 55.539 45.381 113.001 1.00 52.18 C
ATOM 10 O3' U A 68 55.194 46.424 112.107 1.00 52.77 O
ATOM 11 C2' U A 68 54.986 44.039 112.543 1.00 52.99 C
ATOM 12 O2' U A 68 55.106 43.828 111.151 1.00 50.93 O
ATOM 13 C1' U A 68 55.908 43.074 113.289 1.00 52.75 C
ATOM 14 N1 U A 68 55.337 42.642 114.576 1.00 52.78 N
ATOM 15 C2 U A 68 54.366 41.654 114.543 1.00 53.26 C
ATOM 16 O2 U A 68 53.982 41.138 113.508 1.00 53.87 O
ATOM 17 N3 U A 68 53.859 41.296 115.768 1.00 53.69 N
ATOM 18 C4 U A 68 54.211 41.814 116.994 1.00 54.66 C
ATOM 19 O4 U A 68 53.639 41.409 118.005 1.00 56.57 O
ATOM 20 C5 U A 68 55.222 42.825 116.948 1.00 54.52 C
ATOM 21 C6 U A 68 55.737 43.195 115.771 1.00 53.73 C
ATOM 22 P U A 69 53.808 47.208 112.298 1.00 51.98 P
ATOM 23 OP1 U A 69 53.777 48.257 111.251 1.00 53.19 O
ATOM 24 OP2 U A 69 53.676 47.594 113.727 1.00 52.18 O
ATOM 25 O5' U A 69 52.695 46.118 111.961 1.00 53.83 O
TER
ATOM 1 O3' U B 110 45.139 35.462 117.393 1.00 65.34 O
ATOM 2 P U B 111 46.129 34.224 117.169 1.00 65.35 P
ATOM 3 OP1 U B 111 45.432 33.236 116.294 1.00 62.67 O
ATOM 4 OP2 U B 111 46.659 33.803 118.493 1.00 65.06 O
ATOM 5 O5' U B 111 47.337 34.849 116.345 1.00 65.45 O
ATOM 6 C5' U B 111 47.145 35.338 115.005 1.00 62.23 C
ATOM 7 C4' U B 111 48.425 35.938 114.490 1.00 59.46 C
ATOM 8 O4' U B 111 48.760 37.117 115.259 1.00 59.22 O
ATOM 9 C3' U B 111 49.650 35.070 114.691 1.00 58.17 C
ATOM 10 O3' U B 111 49.708 34.062 113.696 1.00 57.02 O
ATOM 11 C2' U B 111 50.782 36.080 114.550 1.00 57.61 C
ATOM 12 O2' U B 111 51.073 36.348 113.198 1.00 56.91 O
ATOM 13 C1' U B 111 50.157 37.333 115.176 1.00 58.32 C
ATOM 14 N1 U B 111 50.670 37.700 116.505 1.00 59.15 N
ATOM 15 C2 U B 111 51.440 38.849 116.605 1.00 60.07 C
ATOM 16 O2 U B 111 51.671 39.581 115.662 1.00 62.16 O
ATOM 17 N3 U B 111 51.930 39.113 117.856 1.00 60.17 N
ATOM 18 C4 U B 111 51.730 38.374 118.997 1.00 60.21 C
ATOM 19 O4 U B 111 52.320 38.694 120.032 1.00 60.86 O
ATOM 20 C5 U B 111 50.898 37.223 118.824 1.00 59.65 C
ATOM 21 C6 U B 111 50.411 36.931 117.615 1.00 58.73 C
ATOM 22 P C B 112 50.126 32.571 114.102 1.00 56.53 P
ATOM 23 OP1 C B 112 50.029 31.754 112.870 1.00 56.67 O
ATOM 24 OP2 C B 112 49.348 32.183 115.305 1.00 58.36 O
ATOM 25 O5' C B 112 51.658 32.687 114.515 1.00 53.97 O
TER
ATOM 2 P U A 68 58.252 46.795 116.357 1.00 51.64 P
ATOM 3 OP1 U A 68 58.394 48.182 115.869 1.00 52.83 O
ATOM 4 OP2 U A 68 57.618 46.552 117.676 1.00 51.73 O
ATOM 5 O5' U A 68 57.455 45.988 115.237 1.00 50.65 O
ATOM 6 C5' U A 68 57.874 46.038 113.862 1.00 50.59 C
ATOM 7 C4' U A 68 57.033 45.114 113.016 1.00 51.68 C
ATOM 8 O4' U A 68 57.128 43.760 113.530 1.00 52.12 O
ATOM 9 C3' U A 68 55.539 45.381 113.001 1.00 52.18 C
ATOM 10 O3' U A 68 55.194 46.424 112.107 1.00 52.77 O
ATOM 11 C2' U A 68 54.986 44.039 112.543 1.00 52.99 C
ATOM 12 O2' U A 68 55.106 43.828 111.151 1.00 50.93 O
ATOM 13 C1' U A 68 55.908 43.074 113.289 1.00 52.75 C
ATOM 14 N1 U A 68 55.337 42.642 114.576 1.00 52.78 N
ATOM 15 C2 U A 68 54.366 41.654 114.543 1.00 53.26 C
ATOM 16 O2 U A 68 53.982 41.138 113.508 1.00 53.87 O
ATOM 17 N3 U A 68 53.859 41.296 115.768 1.00 53.69 N
ATOM 18 C4 U A 68 54.211 41.814 116.994 1.00 54.66 C
ATOM 19 O4 U A 68 53.639 41.409 118.005 1.00 56.57 O
ATOM 20 C5 U A 68 55.222 42.825 116.948 1.00 54.52 C
ATOM 21 C6 U A 68 55.737 43.195 115.771 1.00 53.73 C
ATOM 22 P U A 69 53.808 47.208 112.298 1.00 51.98 P
ATOM 23 OP1 U A 69 53.777 48.257 111.251 1.00 53.19 O
ATOM 24 OP2 U A 69 53.676 47.594 113.727 1.00 52.18 O
ATOM 25 O5' U A 69 52.695 46.118 111.961 1.00 53.83 O
TER
ATOM 1 O3' U B 110 45.139 35.462 117.393 1.00 65.34 O
ATOM 2 P U B 111 46.129 34.224 117.169 1.00 65.35 P
ATOM 3 OP1 U B 111 45.432 33.236 116.294 1.00 62.67 O
ATOM 4 OP2 U B 111 46.659 33.803 118.493 1.00 65.06 O
ATOM 5 O5' U B 111 47.337 34.849 116.345 1.00 65.45 O
ATOM 6 C5' U B 111 47.145 35.338 115.005 1.00 62.23 C
ATOM 7 C4' U B 111 48.425 35.938 114.490 1.00 59.46 C
ATOM 8 O4' U B 111 48.760 37.117 115.259 1.00 59.22 O
ATOM 9 C3' U B 111 49.650 35.070 114.691 1.00 58.17 C
ATOM 10 O3' U B 111 49.708 34.062 113.696 1.00 57.02 O
ATOM 11 C2' U B 111 50.782 36.080 114.550 1.00 57.61 C
ATOM 12 O2' U B 111 51.073 36.348 113.198 1.00 56.91 O
ATOM 13 C1' U B 111 50.157 37.333 115.176 1.00 58.32 C
ATOM 14 N1 U B 111 50.670 37.700 116.505 1.00 59.15 N
ATOM 15 C2 U B 111 51.440 38.849 116.605 1.00 60.07 C
ATOM 16 O2 U B 111 51.671 39.581 115.662 1.00 62.16 O
ATOM 17 N3 U B 111 51.930 39.113 117.856 1.00 60.17 N
ATOM 18 C4 U B 111 51.730 38.374 118.997 1.00 60.21 C
ATOM 19 O4 U B 111 52.320 38.694 120.032 1.00 60.86 O
ATOM 20 C5 U B 111 50.898 37.223 118.824 1.00 59.65 C
ATOM 21 C6 U B 111 50.411 36.931 117.615 1.00 58.73 C
ATOM 22 P C B 112 50.126 32.571 114.102 1.00 56.53 P
ATOM 23 OP1 C B 112 50.029 31.754 112.870 1.00 56.67 O
ATOM 24 OP2 C B 112 49.348 32.183 115.305 1.00 58.36 O
ATOM 25 O5' C B 112 51.658 32.687 114.515 1.00 53.97 O
TER
Atoms:
C4: (54.211,41.814,116.994)
N3: (53.859,41.296,115.768)
OP1: (58.394,48.182,115.869)
OP2: (57.618,46.552,117.676)
C2: (54.366,41.654,114.543)
C1': (55.908,43.074,113.289)
C3': (55.539,45.381,113.001)
O5': (57.455,45.988,115.237)
O4': (57.128,43.760,113.530)
C5': (57.874,46.038,113.862)
P: (58.252,46.795,116.357)
C4': (57.033,45.114,113.016)
C2': (54.986,44.039,112.543)
O2': (55.106,43.828,111.151)
N1: (55.337,42.642,114.576)
O4: (53.639,41.409,118.005)
O2: (53.982,41.138,113.508)
C6: (55.737,43.195,115.771)
C5: (55.222,42.825,116.948)
O3': (55.194,46.424,112.107)
N3: (53.859,41.296,115.768)
OP1: (58.394,48.182,115.869)
OP2: (57.618,46.552,117.676)
C2: (54.366,41.654,114.543)
C1': (55.908,43.074,113.289)
C3': (55.539,45.381,113.001)
O5': (57.455,45.988,115.237)
O4': (57.128,43.760,113.530)
C5': (57.874,46.038,113.862)
P: (58.252,46.795,116.357)
C4': (57.033,45.114,113.016)
C2': (54.986,44.039,112.543)
O2': (55.106,43.828,111.151)
N1: (55.337,42.642,114.576)
O4: (53.639,41.409,118.005)
O2: (53.982,41.138,113.508)
C6: (55.737,43.195,115.771)
C5: (55.222,42.825,116.948)
O3': (55.194,46.424,112.107)
C4: (51.730,38.374,118.997)
N3: (51.930,39.113,117.856)
OP1: (45.432,33.236,116.294)
OP2: (46.659,33.803,118.493)
C2: (51.440,38.849,116.605)
C1': (50.157,37.333,115.176)
C3': (49.650,35.070,114.691)
O5': (47.337,34.849,116.345)
O4': (48.760,37.117,115.259)
C5': (47.145,35.338,115.005)
P: (46.129,34.224,117.169)
C4': (48.425,35.938,114.490)
C2': (50.782,36.080,114.550)
O2': (51.073,36.348,113.198)
N1: (50.670,37.700,116.505)
O4: (52.320,38.694,120.032)
O2: (51.671,39.581,115.662)
C6: (50.411,36.931,117.615)
C5: (50.898,37.223,118.824)
O3': (49.708,34.062,113.696)
N3: (51.930,39.113,117.856)
OP1: (45.432,33.236,116.294)
OP2: (46.659,33.803,118.493)
C2: (51.440,38.849,116.605)
C1': (50.157,37.333,115.176)
C3': (49.650,35.070,114.691)
O5': (47.337,34.849,116.345)
O4': (48.760,37.117,115.259)
C5': (47.145,35.338,115.005)
P: (46.129,34.224,117.169)
C4': (48.425,35.938,114.490)
C2': (50.782,36.080,114.550)
O2': (51.073,36.348,113.198)
N1: (50.670,37.700,116.505)
O4: (52.320,38.694,120.032)
O2: (51.671,39.581,115.662)
C6: (50.411,36.931,117.615)
C5: (50.898,37.223,118.824)
O3': (49.708,34.062,113.696)
Image (generated by PyMOL):