Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2002:A2110
Extra
PDB:
ATOM 1 O3' C A2001 -21.111 162.758 122.573 1.00 0.79 O
ATOM 2 P U A2002 -20.649 164.216 122.110 1.00 5.46 P
ATOM 3 OP1 U A2002 -20.491 164.185 120.634 1.00 22.28 O
ATOM 4 OP2 U A2002 -19.506 164.652 122.967 1.00 22.28 O
ATOM 5 O5' U A2002 -21.907 165.115 122.488 1.00 5.08 O
ATOM 6 C5' U A2002 -23.147 164.956 121.795 1.00 5.08 C
ATOM 7 C4' U A2002 -24.193 165.892 122.351 1.00 5.08 C
ATOM 8 O4' U A2002 -24.444 165.553 123.741 1.00 5.08 O
ATOM 9 C3' U A2002 -23.893 167.389 122.375 1.00 5.08 C
ATOM 10 O3' U A2002 -24.142 168.022 121.125 1.00 5.08 O
ATOM 11 C2' U A2002 -24.860 167.878 123.447 1.00 5.08 C
ATOM 12 O2' U A2002 -26.174 168.057 122.958 1.00 5.08 O
ATOM 13 C1' U A2002 -24.849 166.712 124.442 1.00 5.08 C
ATOM 14 N1 U A2002 -23.903 166.964 125.534 1.00 1.11 N
ATOM 15 C2 U A2002 -24.401 167.559 126.673 1.00 1.11 C
ATOM 16 O2 U A2002 -25.581 167.829 126.833 1.00 1.11 O
ATOM 17 N3 U A2002 -23.468 167.843 127.619 1.00 1.11 N
ATOM 18 C4 U A2002 -22.113 167.610 127.548 1.00 1.11 C
ATOM 19 O4 U A2002 -21.377 168.047 128.448 1.00 1.11 O
ATOM 20 C5 U A2002 -21.684 166.962 126.349 1.00 1.11 C
ATOM 21 C6 U A2002 -22.573 166.663 125.414 1.00 1.11 C
ATOM 22 P G A2003 -23.116 169.136 120.565 1.00 18.85 P
ATOM 23 OP1 G A2003 -23.040 168.904 119.104 1.00 14.76 O
ATOM 24 OP2 G A2003 -21.868 169.185 121.350 1.00 14.76 O
ATOM 25 O5' G A2003 -23.900 170.500 120.776 1.00 14.62 O
TER
ATOM 1 O3' U B2109 -26.386 175.599 134.688 1.00 6.48 O
ATOM 2 P U B2110 -27.127 174.177 134.832 1.00 7.07 P
ATOM 3 OP1 U B2110 -28.367 174.427 135.599 1.00 21.89 O
ATOM 4 OP2 U B2110 -26.167 173.157 135.298 1.00 21.89 O
ATOM 5 O5' U B2110 -27.548 173.794 133.347 1.00 7.40 O
ATOM 6 C5' U B2110 -28.597 174.512 132.697 1.00 7.40 C
ATOM 7 C4' U B2110 -29.038 173.807 131.439 1.00 7.40 C
ATOM 8 O4' U B2110 -27.958 173.757 130.472 1.00 7.40 O
ATOM 9 C3' U B2110 -29.502 172.373 131.559 1.00 7.40 C
ATOM 10 O3' U B2110 -30.848 172.347 131.996 1.00 7.40 O
ATOM 11 C2' U B2110 -29.367 171.882 130.124 1.00 7.40 C
ATOM 12 O2' U B2110 -30.442 172.345 129.334 1.00 7.40 O
ATOM 13 C1' U B2110 -28.123 172.630 129.641 1.00 7.40 C
ATOM 14 N1 U B2110 -26.879 171.848 129.651 1.00 13.26 N
ATOM 15 C2 U B2110 -26.703 170.923 128.652 1.00 13.26 C
ATOM 16 O2 U B2110 -27.542 170.723 127.794 1.00 13.26 O
ATOM 17 N3 U B2110 -25.518 170.236 128.690 1.00 13.26 N
ATOM 18 C4 U B2110 -24.518 170.383 129.614 1.00 13.26 C
ATOM 19 O4 U B2110 -23.458 169.764 129.477 1.00 13.26 O
ATOM 20 C5 U B2110 -24.791 171.348 130.623 1.00 13.26 C
ATOM 21 C6 U B2110 -25.932 172.030 130.603 1.00 13.26 C
ATOM 22 P G B2111 -31.288 171.321 133.152 1.00 15.14 P
ATOM 23 OP1 G B2111 -32.625 171.725 133.685 1.00 30.61 O
ATOM 24 OP2 G B2111 -30.143 171.181 134.086 1.00 30.61 O
ATOM 25 O5' G B2111 -31.453 169.945 132.371 1.00 9.11 O
TER
ATOM 2 P U A2002 -20.649 164.216 122.110 1.00 5.46 P
ATOM 3 OP1 U A2002 -20.491 164.185 120.634 1.00 22.28 O
ATOM 4 OP2 U A2002 -19.506 164.652 122.967 1.00 22.28 O
ATOM 5 O5' U A2002 -21.907 165.115 122.488 1.00 5.08 O
ATOM 6 C5' U A2002 -23.147 164.956 121.795 1.00 5.08 C
ATOM 7 C4' U A2002 -24.193 165.892 122.351 1.00 5.08 C
ATOM 8 O4' U A2002 -24.444 165.553 123.741 1.00 5.08 O
ATOM 9 C3' U A2002 -23.893 167.389 122.375 1.00 5.08 C
ATOM 10 O3' U A2002 -24.142 168.022 121.125 1.00 5.08 O
ATOM 11 C2' U A2002 -24.860 167.878 123.447 1.00 5.08 C
ATOM 12 O2' U A2002 -26.174 168.057 122.958 1.00 5.08 O
ATOM 13 C1' U A2002 -24.849 166.712 124.442 1.00 5.08 C
ATOM 14 N1 U A2002 -23.903 166.964 125.534 1.00 1.11 N
ATOM 15 C2 U A2002 -24.401 167.559 126.673 1.00 1.11 C
ATOM 16 O2 U A2002 -25.581 167.829 126.833 1.00 1.11 O
ATOM 17 N3 U A2002 -23.468 167.843 127.619 1.00 1.11 N
ATOM 18 C4 U A2002 -22.113 167.610 127.548 1.00 1.11 C
ATOM 19 O4 U A2002 -21.377 168.047 128.448 1.00 1.11 O
ATOM 20 C5 U A2002 -21.684 166.962 126.349 1.00 1.11 C
ATOM 21 C6 U A2002 -22.573 166.663 125.414 1.00 1.11 C
ATOM 22 P G A2003 -23.116 169.136 120.565 1.00 18.85 P
ATOM 23 OP1 G A2003 -23.040 168.904 119.104 1.00 14.76 O
ATOM 24 OP2 G A2003 -21.868 169.185 121.350 1.00 14.76 O
ATOM 25 O5' G A2003 -23.900 170.500 120.776 1.00 14.62 O
TER
ATOM 1 O3' U B2109 -26.386 175.599 134.688 1.00 6.48 O
ATOM 2 P U B2110 -27.127 174.177 134.832 1.00 7.07 P
ATOM 3 OP1 U B2110 -28.367 174.427 135.599 1.00 21.89 O
ATOM 4 OP2 U B2110 -26.167 173.157 135.298 1.00 21.89 O
ATOM 5 O5' U B2110 -27.548 173.794 133.347 1.00 7.40 O
ATOM 6 C5' U B2110 -28.597 174.512 132.697 1.00 7.40 C
ATOM 7 C4' U B2110 -29.038 173.807 131.439 1.00 7.40 C
ATOM 8 O4' U B2110 -27.958 173.757 130.472 1.00 7.40 O
ATOM 9 C3' U B2110 -29.502 172.373 131.559 1.00 7.40 C
ATOM 10 O3' U B2110 -30.848 172.347 131.996 1.00 7.40 O
ATOM 11 C2' U B2110 -29.367 171.882 130.124 1.00 7.40 C
ATOM 12 O2' U B2110 -30.442 172.345 129.334 1.00 7.40 O
ATOM 13 C1' U B2110 -28.123 172.630 129.641 1.00 7.40 C
ATOM 14 N1 U B2110 -26.879 171.848 129.651 1.00 13.26 N
ATOM 15 C2 U B2110 -26.703 170.923 128.652 1.00 13.26 C
ATOM 16 O2 U B2110 -27.542 170.723 127.794 1.00 13.26 O
ATOM 17 N3 U B2110 -25.518 170.236 128.690 1.00 13.26 N
ATOM 18 C4 U B2110 -24.518 170.383 129.614 1.00 13.26 C
ATOM 19 O4 U B2110 -23.458 169.764 129.477 1.00 13.26 O
ATOM 20 C5 U B2110 -24.791 171.348 130.623 1.00 13.26 C
ATOM 21 C6 U B2110 -25.932 172.030 130.603 1.00 13.26 C
ATOM 22 P G B2111 -31.288 171.321 133.152 1.00 15.14 P
ATOM 23 OP1 G B2111 -32.625 171.725 133.685 1.00 30.61 O
ATOM 24 OP2 G B2111 -30.143 171.181 134.086 1.00 30.61 O
ATOM 25 O5' G B2111 -31.453 169.945 132.371 1.00 9.11 O
TER
Atoms:
C4: (-22.113,167.610,127.548)
N3: (-23.468,167.843,127.619)
OP1: (-20.491,164.185,120.634)
OP2: (-19.506,164.652,122.967)
C2: (-24.401,167.559,126.673)
C1': (-24.849,166.712,124.442)
C3': (-23.893,167.389,122.375)
O5': (-21.907,165.115,122.488)
O4': (-24.444,165.553,123.741)
C5': (-23.147,164.956,121.795)
P: (-20.649,164.216,122.110)
C4': (-24.193,165.892,122.351)
C2': (-24.860,167.878,123.447)
O2': (-26.174,168.057,122.958)
N1: (-23.903,166.964,125.534)
O4: (-21.377,168.047,128.448)
O2: (-25.581,167.829,126.833)
C6: (-22.573,166.663,125.414)
C5: (-21.684,166.962,126.349)
O3': (-24.142,168.022,121.125)
N3: (-23.468,167.843,127.619)
OP1: (-20.491,164.185,120.634)
OP2: (-19.506,164.652,122.967)
C2: (-24.401,167.559,126.673)
C1': (-24.849,166.712,124.442)
C3': (-23.893,167.389,122.375)
O5': (-21.907,165.115,122.488)
O4': (-24.444,165.553,123.741)
C5': (-23.147,164.956,121.795)
P: (-20.649,164.216,122.110)
C4': (-24.193,165.892,122.351)
C2': (-24.860,167.878,123.447)
O2': (-26.174,168.057,122.958)
N1: (-23.903,166.964,125.534)
O4: (-21.377,168.047,128.448)
O2: (-25.581,167.829,126.833)
C6: (-22.573,166.663,125.414)
C5: (-21.684,166.962,126.349)
O3': (-24.142,168.022,121.125)
C4: (-24.518,170.383,129.614)
N3: (-25.518,170.236,128.690)
OP1: (-28.367,174.427,135.599)
OP2: (-26.167,173.157,135.298)
C2: (-26.703,170.923,128.652)
C1': (-28.123,172.630,129.641)
C3': (-29.502,172.373,131.559)
O5': (-27.548,173.794,133.347)
O4': (-27.958,173.757,130.472)
C5': (-28.597,174.512,132.697)
P: (-27.127,174.177,134.832)
C4': (-29.038,173.807,131.439)
C2': (-29.367,171.882,130.124)
O2': (-30.442,172.345,129.334)
N1: (-26.879,171.848,129.651)
O4: (-23.458,169.764,129.477)
O2: (-27.542,170.723,127.794)
C6: (-25.932,172.030,130.603)
C5: (-24.791,171.348,130.623)
O3': (-30.848,172.347,131.996)
N3: (-25.518,170.236,128.690)
OP1: (-28.367,174.427,135.599)
OP2: (-26.167,173.157,135.298)
C2: (-26.703,170.923,128.652)
C1': (-28.123,172.630,129.641)
C3': (-29.502,172.373,131.559)
O5': (-27.548,173.794,133.347)
O4': (-27.958,173.757,130.472)
C5': (-28.597,174.512,132.697)
P: (-27.127,174.177,134.832)
C4': (-29.038,173.807,131.439)
C2': (-29.367,171.882,130.124)
O2': (-30.442,172.345,129.334)
N1: (-26.879,171.848,129.651)
O4: (-23.458,169.764,129.477)
O2: (-27.542,170.723,127.794)
C6: (-25.932,172.030,130.603)
C5: (-24.791,171.348,130.623)
O3': (-30.848,172.347,131.996)
Image (generated by PyMOL):