Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11647:11686
Extra
PDB:
ATOM 1 O3' U A1646 4.614 51.048 147.933 1.00 91.24 O
ATOM 2 P U A1647 3.615 49.838 147.525 1.00 76.68 P
ATOM 3 OP1 U A1647 2.222 50.293 147.835 1.00 77.22 O
ATOM 4 OP2 U A1647 4.120 48.583 148.165 1.00 76.42 O
ATOM 5 O5' U A1647 3.822 49.745 145.961 1.00 75.82 O
ATOM 6 C5' U A1647 3.341 50.758 145.108 1.00 75.88 C
ATOM 7 C4' U A1647 3.755 50.496 143.701 1.00 75.02 C
ATOM 8 O4' U A1647 5.185 50.291 143.655 1.00 74.72 O
ATOM 9 C3' U A1647 3.196 49.235 143.073 1.00 74.28 C
ATOM 10 O3' U A1647 1.860 49.390 142.628 1.00 74.33 O
ATOM 11 C2' U A1647 4.181 49.000 141.951 1.00 73.51 C
ATOM 12 O2' U A1647 3.944 49.940 140.910 1.00 73.43 O
ATOM 13 C1' U A1647 5.498 49.372 142.639 1.00 73.81 C
ATOM 14 N1 U A1647 6.186 48.199 143.255 1.00 73.55 N
ATOM 15 C2 U A1647 7.002 47.422 142.465 1.00 72.76 C
ATOM 16 O2 U A1647 7.149 47.645 141.284 1.00 72.26 O
ATOM 17 N3 U A1647 7.618 46.360 143.097 1.00 72.57 N
ATOM 18 C4 U A1647 7.524 45.984 144.435 1.00 73.09 C
ATOM 19 O4 U A1647 8.134 44.989 144.865 1.00 72.85 O
ATOM 20 C5 U A1647 6.667 46.839 145.184 1.00 73.90 C
ATOM 21 C6 U A1647 6.061 47.874 144.582 1.00 74.08 C
ATOM 22 P A A1648 0.869 48.126 142.574 1.00 88.29 P
ATOM 23 OP1 A A1648 -0.423 48.604 142.025 1.00 88.43 O
ATOM 24 OP2 A A1648 0.877 47.498 143.913 1.00 88.69 O
ATOM 25 O5' A A1648 1.582 47.162 141.528 1.00 87.31 O
TER
ATOM 1 O3' A B1685 11.753 40.661 135.860 1.00 74.82 O
ATOM 2 P U B1686 12.580 42.013 135.529 1.00 77.85 P
ATOM 3 OP1 U B1686 13.295 41.786 134.260 1.00 77.15 O
ATOM 4 OP2 U B1686 13.378 42.354 136.748 1.00 78.43 O
ATOM 5 O5' U B1686 11.440 43.099 135.321 1.00 78.27 O
ATOM 6 C5' U B1686 11.172 43.671 134.056 1.00 77.96 C
ATOM 7 C4' U B1686 10.087 44.730 134.146 1.00 78.51 C
ATOM 8 O4' U B1686 9.020 44.302 135.046 1.00 78.87 O
ATOM 9 C3' U B1686 10.502 46.059 134.721 1.00 79.21 C
ATOM 10 O3' U B1686 11.227 46.844 133.799 1.00 79.03 O
ATOM 11 C2' U B1686 9.161 46.654 135.139 1.00 79.78 C
ATOM 12 O2' U B1686 8.429 47.072 134.007 1.00 79.54 O
ATOM 13 C1' U B1686 8.464 45.427 135.700 1.00 79.64 C
ATOM 14 N1 U B1686 8.678 45.287 137.157 1.00 80.21 N
ATOM 15 C2 U B1686 8.015 46.123 138.034 1.00 81.00 C
ATOM 16 O2 U B1686 7.236 46.984 137.713 1.00 81.28 O
ATOM 17 N3 U B1686 8.276 45.920 139.354 1.00 81.49 N
ATOM 18 C4 U B1686 9.126 44.995 139.922 1.00 81.30 C
ATOM 19 O4 U B1686 9.252 44.946 141.156 1.00 81.85 O
ATOM 20 C5 U B1686 9.772 44.151 138.952 1.00 80.47 C
ATOM 21 C6 U B1686 9.526 44.326 137.647 1.00 79.97 C
ATOM 22 P G B1687 12.499 47.696 134.280 1.00 74.41 P
ATOM 23 OP1 G B1687 13.314 47.967 133.080 1.00 73.92 O
ATOM 24 OP2 G B1687 13.110 46.987 135.418 1.00 74.57 O
ATOM 25 O5' G B1687 11.827 49.028 134.790 1.00 75.23 O
TER
ATOM 2 P U A1647 3.615 49.838 147.525 1.00 76.68 P
ATOM 3 OP1 U A1647 2.222 50.293 147.835 1.00 77.22 O
ATOM 4 OP2 U A1647 4.120 48.583 148.165 1.00 76.42 O
ATOM 5 O5' U A1647 3.822 49.745 145.961 1.00 75.82 O
ATOM 6 C5' U A1647 3.341 50.758 145.108 1.00 75.88 C
ATOM 7 C4' U A1647 3.755 50.496 143.701 1.00 75.02 C
ATOM 8 O4' U A1647 5.185 50.291 143.655 1.00 74.72 O
ATOM 9 C3' U A1647 3.196 49.235 143.073 1.00 74.28 C
ATOM 10 O3' U A1647 1.860 49.390 142.628 1.00 74.33 O
ATOM 11 C2' U A1647 4.181 49.000 141.951 1.00 73.51 C
ATOM 12 O2' U A1647 3.944 49.940 140.910 1.00 73.43 O
ATOM 13 C1' U A1647 5.498 49.372 142.639 1.00 73.81 C
ATOM 14 N1 U A1647 6.186 48.199 143.255 1.00 73.55 N
ATOM 15 C2 U A1647 7.002 47.422 142.465 1.00 72.76 C
ATOM 16 O2 U A1647 7.149 47.645 141.284 1.00 72.26 O
ATOM 17 N3 U A1647 7.618 46.360 143.097 1.00 72.57 N
ATOM 18 C4 U A1647 7.524 45.984 144.435 1.00 73.09 C
ATOM 19 O4 U A1647 8.134 44.989 144.865 1.00 72.85 O
ATOM 20 C5 U A1647 6.667 46.839 145.184 1.00 73.90 C
ATOM 21 C6 U A1647 6.061 47.874 144.582 1.00 74.08 C
ATOM 22 P A A1648 0.869 48.126 142.574 1.00 88.29 P
ATOM 23 OP1 A A1648 -0.423 48.604 142.025 1.00 88.43 O
ATOM 24 OP2 A A1648 0.877 47.498 143.913 1.00 88.69 O
ATOM 25 O5' A A1648 1.582 47.162 141.528 1.00 87.31 O
TER
ATOM 1 O3' A B1685 11.753 40.661 135.860 1.00 74.82 O
ATOM 2 P U B1686 12.580 42.013 135.529 1.00 77.85 P
ATOM 3 OP1 U B1686 13.295 41.786 134.260 1.00 77.15 O
ATOM 4 OP2 U B1686 13.378 42.354 136.748 1.00 78.43 O
ATOM 5 O5' U B1686 11.440 43.099 135.321 1.00 78.27 O
ATOM 6 C5' U B1686 11.172 43.671 134.056 1.00 77.96 C
ATOM 7 C4' U B1686 10.087 44.730 134.146 1.00 78.51 C
ATOM 8 O4' U B1686 9.020 44.302 135.046 1.00 78.87 O
ATOM 9 C3' U B1686 10.502 46.059 134.721 1.00 79.21 C
ATOM 10 O3' U B1686 11.227 46.844 133.799 1.00 79.03 O
ATOM 11 C2' U B1686 9.161 46.654 135.139 1.00 79.78 C
ATOM 12 O2' U B1686 8.429 47.072 134.007 1.00 79.54 O
ATOM 13 C1' U B1686 8.464 45.427 135.700 1.00 79.64 C
ATOM 14 N1 U B1686 8.678 45.287 137.157 1.00 80.21 N
ATOM 15 C2 U B1686 8.015 46.123 138.034 1.00 81.00 C
ATOM 16 O2 U B1686 7.236 46.984 137.713 1.00 81.28 O
ATOM 17 N3 U B1686 8.276 45.920 139.354 1.00 81.49 N
ATOM 18 C4 U B1686 9.126 44.995 139.922 1.00 81.30 C
ATOM 19 O4 U B1686 9.252 44.946 141.156 1.00 81.85 O
ATOM 20 C5 U B1686 9.772 44.151 138.952 1.00 80.47 C
ATOM 21 C6 U B1686 9.526 44.326 137.647 1.00 79.97 C
ATOM 22 P G B1687 12.499 47.696 134.280 1.00 74.41 P
ATOM 23 OP1 G B1687 13.314 47.967 133.080 1.00 73.92 O
ATOM 24 OP2 G B1687 13.110 46.987 135.418 1.00 74.57 O
ATOM 25 O5' G B1687 11.827 49.028 134.790 1.00 75.23 O
TER
Atoms:
C4: (7.524,45.984,144.435)
N3: (7.618,46.360,143.097)
OP1: (2.222,50.293,147.835)
OP2: (4.120,48.583,148.165)
C2: (7.002,47.422,142.465)
C1': (5.498,49.372,142.639)
C3': (3.196,49.235,143.073)
O5': (3.822,49.745,145.961)
O4': (5.185,50.291,143.655)
C5': (3.341,50.758,145.108)
P: (3.615,49.838,147.525)
C4': (3.755,50.496,143.701)
C2': (4.181,49.000,141.951)
O2': (3.944,49.940,140.910)
N1: (6.186,48.199,143.255)
O4: (8.134,44.989,144.865)
O2: (7.149,47.645,141.284)
C6: (6.061,47.874,144.582)
C5: (6.667,46.839,145.184)
O3': (1.860,49.390,142.628)
N3: (7.618,46.360,143.097)
OP1: (2.222,50.293,147.835)
OP2: (4.120,48.583,148.165)
C2: (7.002,47.422,142.465)
C1': (5.498,49.372,142.639)
C3': (3.196,49.235,143.073)
O5': (3.822,49.745,145.961)
O4': (5.185,50.291,143.655)
C5': (3.341,50.758,145.108)
P: (3.615,49.838,147.525)
C4': (3.755,50.496,143.701)
C2': (4.181,49.000,141.951)
O2': (3.944,49.940,140.910)
N1: (6.186,48.199,143.255)
O4: (8.134,44.989,144.865)
O2: (7.149,47.645,141.284)
C6: (6.061,47.874,144.582)
C5: (6.667,46.839,145.184)
O3': (1.860,49.390,142.628)
C4: (9.126,44.995,139.922)
N3: (8.276,45.920,139.354)
OP1: (13.295,41.786,134.260)
OP2: (13.378,42.354,136.748)
C2: (8.015,46.123,138.034)
C1': (8.464,45.427,135.700)
C3': (10.502,46.059,134.721)
O5': (11.440,43.099,135.321)
O4': (9.020,44.302,135.046)
C5': (11.172,43.671,134.056)
P: (12.580,42.013,135.529)
C4': (10.087,44.730,134.146)
C2': (9.161,46.654,135.139)
O2': (8.429,47.072,134.007)
N1: (8.678,45.287,137.157)
O4: (9.252,44.946,141.156)
O2: (7.236,46.984,137.713)
C6: (9.526,44.326,137.647)
C5: (9.772,44.151,138.952)
O3': (11.227,46.844,133.799)
N3: (8.276,45.920,139.354)
OP1: (13.295,41.786,134.260)
OP2: (13.378,42.354,136.748)
C2: (8.015,46.123,138.034)
C1': (8.464,45.427,135.700)
C3': (10.502,46.059,134.721)
O5': (11.440,43.099,135.321)
O4': (9.020,44.302,135.046)
C5': (11.172,43.671,134.056)
P: (12.580,42.013,135.529)
C4': (10.087,44.730,134.146)
C2': (9.161,46.654,135.139)
O2': (8.429,47.072,134.007)
N1: (8.678,45.287,137.157)
O4: (9.252,44.946,141.156)
O2: (7.236,46.984,137.713)
C6: (9.526,44.326,137.647)
C5: (9.772,44.151,138.952)
O3': (11.227,46.844,133.799)
Image (generated by PyMOL):