Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1088:A1093
Extra
PDB:
ATOM 1 O3' G A1087 -104.673 63.686 6.309 1.00 46.28 O
ATOM 2 P U A1088 -105.786 62.577 6.663 1.00 32.49 P
ATOM 3 OP1 U A1088 -106.084 62.692 8.113 1.00 32.49 O
ATOM 4 OP2 U A1088 -105.291 61.288 6.142 1.00 32.49 O
ATOM 5 O5' U A1088 -107.040 63.051 5.807 1.00 32.49 O
ATOM 6 C5' U A1088 -107.635 64.315 6.040 1.00 32.49 C
ATOM 7 C4' U A1088 -108.761 64.581 5.080 1.00 32.49 C
ATOM 8 O4' U A1088 -108.240 64.748 3.742 1.00 32.49 O
ATOM 9 C3' U A1088 -109.779 63.470 4.932 1.00 32.49 C
ATOM 10 O3' U A1088 -110.720 63.445 5.974 1.00 32.49 O
ATOM 11 C2' U A1088 -110.382 63.761 3.580 1.00 32.49 C
ATOM 12 O2' U A1088 -111.270 64.864 3.655 1.00 32.49 O
ATOM 13 C1' U A1088 -109.140 64.187 2.811 1.00 32.49 C
ATOM 14 N1 U A1088 -108.478 63.043 2.168 1.00 32.61 N
ATOM 15 C2 U A1088 -108.992 62.602 0.964 1.00 32.61 C
ATOM 16 O2 U A1088 -109.966 63.109 0.422 1.00 32.61 O
ATOM 17 N3 U A1088 -108.315 61.542 0.430 1.00 32.61 N
ATOM 18 C4 U A1088 -107.217 60.913 0.963 1.00 32.61 C
ATOM 19 O4 U A1088 -106.729 59.970 0.350 1.00 32.61 O
ATOM 20 C5 U A1088 -106.743 61.426 2.206 1.00 32.61 C
ATOM 21 C6 U A1088 -107.379 62.459 2.754 1.00 32.61 C
ATOM 22 P U A1089 -111.405 62.063 6.379 1.00 28.55 P
ATOM 23 OP1 U A1089 -112.138 62.292 7.654 1.00 28.55 O
ATOM 24 OP2 U A1089 -110.335 61.021 6.331 1.00 28.55 O
ATOM 25 O5' U A1089 -112.440 61.839 5.199 1.00 28.55 O
TER
ATOM 1 O3' G B1092 -112.771 59.846 -7.852 1.00 26.03 O
ATOM 2 P U B1093 -114.369 60.057 -7.891 1.00 21.85 P
ATOM 3 OP1 U B1093 -114.993 58.786 -7.465 1.00 21.85 O
ATOM 4 OP2 U B1093 -114.724 60.599 -9.209 1.00 21.85 O
ATOM 5 O5' U B1093 -114.567 61.163 -6.761 1.00 21.85 O
ATOM 6 C5' U B1093 -115.824 61.764 -6.547 1.00 21.85 C
ATOM 7 C4' U B1093 -115.793 62.707 -5.376 1.00 21.85 C
ATOM 8 O4' U B1093 -115.403 61.998 -4.172 1.00 21.85 O
ATOM 9 C3' U B1093 -114.786 63.835 -5.440 1.00 21.85 C
ATOM 10 O3' U B1093 -115.140 64.869 -6.336 1.00 21.85 O
ATOM 11 C2' U B1093 -114.731 64.262 -3.985 1.00 21.85 C
ATOM 12 O2' U B1093 -115.913 64.958 -3.613 1.00 21.85 O
ATOM 13 C1' U B1093 -114.737 62.895 -3.304 1.00 21.85 C
ATOM 14 N1 U B1093 -113.372 62.404 -3.078 1.00 22.07 N
ATOM 15 C2 U B1093 -112.670 63.117 -2.120 1.00 22.07 C
ATOM 16 O2 U B1093 -113.152 64.067 -1.502 1.00 22.07 O
ATOM 17 N3 U B1093 -111.394 62.675 -1.897 1.00 22.07 N
ATOM 18 C4 U B1093 -110.773 61.626 -2.523 1.00 22.07 C
ATOM 19 O4 U B1093 -109.619 61.379 -2.187 1.00 22.07 O
ATOM 20 C5 U B1093 -111.563 60.938 -3.511 1.00 22.07 C
ATOM 21 C6 U B1093 -112.816 61.345 -3.759 1.00 22.07 C
ATOM 22 P C B1094 -114.064 65.388 -7.406 1.00 34.60 P
ATOM 23 OP1 C B1094 -114.815 65.862 -8.594 1.00 34.60 O
ATOM 24 OP2 C B1094 -113.076 64.312 -7.581 1.00 34.60 O
ATOM 25 O5' C B1094 -113.394 66.620 -6.659 1.00 34.60 O
TER
ATOM 2 P U A1088 -105.786 62.577 6.663 1.00 32.49 P
ATOM 3 OP1 U A1088 -106.084 62.692 8.113 1.00 32.49 O
ATOM 4 OP2 U A1088 -105.291 61.288 6.142 1.00 32.49 O
ATOM 5 O5' U A1088 -107.040 63.051 5.807 1.00 32.49 O
ATOM 6 C5' U A1088 -107.635 64.315 6.040 1.00 32.49 C
ATOM 7 C4' U A1088 -108.761 64.581 5.080 1.00 32.49 C
ATOM 8 O4' U A1088 -108.240 64.748 3.742 1.00 32.49 O
ATOM 9 C3' U A1088 -109.779 63.470 4.932 1.00 32.49 C
ATOM 10 O3' U A1088 -110.720 63.445 5.974 1.00 32.49 O
ATOM 11 C2' U A1088 -110.382 63.761 3.580 1.00 32.49 C
ATOM 12 O2' U A1088 -111.270 64.864 3.655 1.00 32.49 O
ATOM 13 C1' U A1088 -109.140 64.187 2.811 1.00 32.49 C
ATOM 14 N1 U A1088 -108.478 63.043 2.168 1.00 32.61 N
ATOM 15 C2 U A1088 -108.992 62.602 0.964 1.00 32.61 C
ATOM 16 O2 U A1088 -109.966 63.109 0.422 1.00 32.61 O
ATOM 17 N3 U A1088 -108.315 61.542 0.430 1.00 32.61 N
ATOM 18 C4 U A1088 -107.217 60.913 0.963 1.00 32.61 C
ATOM 19 O4 U A1088 -106.729 59.970 0.350 1.00 32.61 O
ATOM 20 C5 U A1088 -106.743 61.426 2.206 1.00 32.61 C
ATOM 21 C6 U A1088 -107.379 62.459 2.754 1.00 32.61 C
ATOM 22 P U A1089 -111.405 62.063 6.379 1.00 28.55 P
ATOM 23 OP1 U A1089 -112.138 62.292 7.654 1.00 28.55 O
ATOM 24 OP2 U A1089 -110.335 61.021 6.331 1.00 28.55 O
ATOM 25 O5' U A1089 -112.440 61.839 5.199 1.00 28.55 O
TER
ATOM 1 O3' G B1092 -112.771 59.846 -7.852 1.00 26.03 O
ATOM 2 P U B1093 -114.369 60.057 -7.891 1.00 21.85 P
ATOM 3 OP1 U B1093 -114.993 58.786 -7.465 1.00 21.85 O
ATOM 4 OP2 U B1093 -114.724 60.599 -9.209 1.00 21.85 O
ATOM 5 O5' U B1093 -114.567 61.163 -6.761 1.00 21.85 O
ATOM 6 C5' U B1093 -115.824 61.764 -6.547 1.00 21.85 C
ATOM 7 C4' U B1093 -115.793 62.707 -5.376 1.00 21.85 C
ATOM 8 O4' U B1093 -115.403 61.998 -4.172 1.00 21.85 O
ATOM 9 C3' U B1093 -114.786 63.835 -5.440 1.00 21.85 C
ATOM 10 O3' U B1093 -115.140 64.869 -6.336 1.00 21.85 O
ATOM 11 C2' U B1093 -114.731 64.262 -3.985 1.00 21.85 C
ATOM 12 O2' U B1093 -115.913 64.958 -3.613 1.00 21.85 O
ATOM 13 C1' U B1093 -114.737 62.895 -3.304 1.00 21.85 C
ATOM 14 N1 U B1093 -113.372 62.404 -3.078 1.00 22.07 N
ATOM 15 C2 U B1093 -112.670 63.117 -2.120 1.00 22.07 C
ATOM 16 O2 U B1093 -113.152 64.067 -1.502 1.00 22.07 O
ATOM 17 N3 U B1093 -111.394 62.675 -1.897 1.00 22.07 N
ATOM 18 C4 U B1093 -110.773 61.626 -2.523 1.00 22.07 C
ATOM 19 O4 U B1093 -109.619 61.379 -2.187 1.00 22.07 O
ATOM 20 C5 U B1093 -111.563 60.938 -3.511 1.00 22.07 C
ATOM 21 C6 U B1093 -112.816 61.345 -3.759 1.00 22.07 C
ATOM 22 P C B1094 -114.064 65.388 -7.406 1.00 34.60 P
ATOM 23 OP1 C B1094 -114.815 65.862 -8.594 1.00 34.60 O
ATOM 24 OP2 C B1094 -113.076 64.312 -7.581 1.00 34.60 O
ATOM 25 O5' C B1094 -113.394 66.620 -6.659 1.00 34.60 O
TER
Atoms:
C4: (-107.217,60.913,0.963)
N3: (-108.315,61.542,0.430)
OP1: (-106.084,62.692,8.113)
OP2: (-105.291,61.288,6.142)
C2: (-108.992,62.602,0.964)
C1': (-109.140,64.187,2.811)
C3': (-109.779,63.470,4.932)
O5': (-107.040,63.051,5.807)
O4': (-108.240,64.748,3.742)
C5': (-107.635,64.315,6.040)
P: (-105.786,62.577,6.663)
C4': (-108.761,64.581,5.080)
C2': (-110.382,63.761,3.580)
O2': (-111.270,64.864,3.655)
N1: (-108.478,63.043,2.168)
O4: (-106.729,59.970,0.350)
O2: (-109.966,63.109,0.422)
C6: (-107.379,62.459,2.754)
C5: (-106.743,61.426,2.206)
O3': (-110.720,63.445,5.974)
N3: (-108.315,61.542,0.430)
OP1: (-106.084,62.692,8.113)
OP2: (-105.291,61.288,6.142)
C2: (-108.992,62.602,0.964)
C1': (-109.140,64.187,2.811)
C3': (-109.779,63.470,4.932)
O5': (-107.040,63.051,5.807)
O4': (-108.240,64.748,3.742)
C5': (-107.635,64.315,6.040)
P: (-105.786,62.577,6.663)
C4': (-108.761,64.581,5.080)
C2': (-110.382,63.761,3.580)
O2': (-111.270,64.864,3.655)
N1: (-108.478,63.043,2.168)
O4: (-106.729,59.970,0.350)
O2: (-109.966,63.109,0.422)
C6: (-107.379,62.459,2.754)
C5: (-106.743,61.426,2.206)
O3': (-110.720,63.445,5.974)
C4: (-110.773,61.626,-2.523)
N3: (-111.394,62.675,-1.897)
OP1: (-114.993,58.786,-7.465)
OP2: (-114.724,60.599,-9.209)
C2: (-112.670,63.117,-2.120)
C1': (-114.737,62.895,-3.304)
C3': (-114.786,63.835,-5.440)
O5': (-114.567,61.163,-6.761)
O4': (-115.403,61.998,-4.172)
C5': (-115.824,61.764,-6.547)
P: (-114.369,60.057,-7.891)
C4': (-115.793,62.707,-5.376)
C2': (-114.731,64.262,-3.985)
O2': (-115.913,64.958,-3.613)
N1: (-113.372,62.404,-3.078)
O4: (-109.619,61.379,-2.187)
O2: (-113.152,64.067,-1.502)
C6: (-112.816,61.345,-3.759)
C5: (-111.563,60.938,-3.511)
O3': (-115.140,64.869,-6.336)
N3: (-111.394,62.675,-1.897)
OP1: (-114.993,58.786,-7.465)
OP2: (-114.724,60.599,-9.209)
C2: (-112.670,63.117,-2.120)
C1': (-114.737,62.895,-3.304)
C3': (-114.786,63.835,-5.440)
O5': (-114.567,61.163,-6.761)
O4': (-115.403,61.998,-4.172)
C5': (-115.824,61.764,-6.547)
P: (-114.369,60.057,-7.891)
C4': (-115.793,62.707,-5.376)
C2': (-114.731,64.262,-3.985)
O2': (-115.913,64.958,-3.613)
N1: (-113.372,62.404,-3.078)
O4: (-109.619,61.379,-2.187)
O2: (-113.152,64.067,-1.502)
C6: (-112.816,61.345,-3.759)
C5: (-111.563,60.938,-3.511)
O3': (-115.140,64.869,-6.336)
Image (generated by PyMOL):