Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02336:02368
Extra
PDB:
ATOM 1 O3' G A2335 69.371 97.410 120.434 1.00 51.64 O
ATOM 2 P U A2336 69.866 98.417 121.601 1.00 53.19 P
ATOM 3 OP1 U A2336 71.026 97.770 122.276 1.00 55.44 O
ATOM 4 OP2 U A2336 68.689 98.836 122.413 1.00 53.77 O
ATOM 5 O5' U A2336 70.415 99.701 120.834 1.00 50.81 O
ATOM 6 C5' U A2336 71.687 99.685 120.157 1.00 47.49 C
ATOM 7 C4' U A2336 72.006 101.066 119.627 1.00 46.10 C
ATOM 8 O4' U A2336 70.996 101.450 118.655 1.00 46.27 O
ATOM 9 C3' U A2336 71.967 102.185 120.657 1.00 45.22 C
ATOM 10 O3' U A2336 73.179 102.270 121.405 1.00 44.08 O
ATOM 11 C2' U A2336 71.703 103.417 119.798 1.00 44.67 C
ATOM 12 O2' U A2336 72.856 103.902 119.147 1.00 45.97 O
ATOM 13 C1' U A2336 70.759 102.849 118.737 1.00 45.54 C
ATOM 14 N1 U A2336 69.329 103.085 119.002 1.00 44.64 N
ATOM 15 C2 U A2336 68.832 104.362 118.765 1.00 45.06 C
ATOM 16 O2 U A2336 69.527 105.286 118.351 1.00 44.84 O
ATOM 17 N3 U A2336 67.492 104.520 119.031 1.00 41.94 N
ATOM 18 C4 U A2336 66.621 103.566 119.501 1.00 41.57 C
ATOM 19 O4 U A2336 65.457 103.880 119.737 1.00 41.70 O
ATOM 20 C5 U A2336 67.203 102.276 119.718 1.00 42.97 C
ATOM 21 C6 U A2336 68.503 102.083 119.468 1.00 44.01 C
ATOM 22 P C A2337 73.141 102.780 122.933 1.00 45.99 P
ATOM 23 OP1 C A2337 74.546 102.998 123.366 1.00 44.41 O
ATOM 24 OP2 C A2337 72.256 101.888 123.734 1.00 44.54 O
ATOM 25 O5' C A2337 72.437 104.204 122.831 1.00 45.38 O
TER
ATOM 1 O3' C B2367 65.963 114.957 118.002 1.00 67.42 O
ATOM 2 P U B2368 66.549 114.063 116.794 1.00 67.51 P
ATOM 3 OP1 U B2368 66.944 115.021 115.728 1.00 69.51 O
ATOM 4 OP2 U B2368 65.577 112.979 116.477 1.00 67.13 O
ATOM 5 O5' U B2368 67.887 113.412 117.373 1.00 63.65 O
ATOM 6 C5' U B2368 69.071 114.205 117.602 1.00 58.07 C
ATOM 7 C4' U B2368 70.282 113.311 117.782 1.00 55.35 C
ATOM 8 O4' U B2368 70.083 112.438 118.925 1.00 54.28 O
ATOM 9 C3' U B2368 70.565 112.359 116.633 1.00 54.80 C
ATOM 10 O3' U B2368 71.287 112.987 115.583 1.00 53.47 O
ATOM 11 C2' U B2368 71.362 111.253 117.307 1.00 54.34 C
ATOM 12 O2' U B2368 72.722 111.571 117.497 1.00 56.85 O
ATOM 13 C1' U B2368 70.667 111.168 118.666 1.00 54.20 C
ATOM 14 N1 U B2368 69.608 110.145 118.693 1.00 54.78 N
ATOM 15 C2 U B2368 69.993 108.810 118.765 1.00 53.78 C
ATOM 16 O2 U B2368 71.158 108.454 118.823 1.00 52.68 O
ATOM 17 N3 U B2368 68.956 107.911 118.767 1.00 53.03 N
ATOM 18 C4 U B2368 67.605 108.197 118.712 1.00 54.09 C
ATOM 19 O4 U B2368 66.789 107.274 118.692 1.00 55.54 O
ATOM 20 C5 U B2368 67.290 109.591 118.650 1.00 53.50 C
ATOM 21 C6 U B2368 68.273 110.493 118.641 1.00 53.80 C
ATOM 22 P U B2369 71.064 112.505 114.067 1.00 54.19 P
ATOM 23 OP1 U B2369 72.001 113.267 113.202 1.00 55.21 O
ATOM 24 OP2 U B2369 69.607 112.541 113.770 1.00 54.33 O
ATOM 25 O5' U B2369 71.527 110.978 114.089 1.00 53.65 O
TER
ATOM 2 P U A2336 69.866 98.417 121.601 1.00 53.19 P
ATOM 3 OP1 U A2336 71.026 97.770 122.276 1.00 55.44 O
ATOM 4 OP2 U A2336 68.689 98.836 122.413 1.00 53.77 O
ATOM 5 O5' U A2336 70.415 99.701 120.834 1.00 50.81 O
ATOM 6 C5' U A2336 71.687 99.685 120.157 1.00 47.49 C
ATOM 7 C4' U A2336 72.006 101.066 119.627 1.00 46.10 C
ATOM 8 O4' U A2336 70.996 101.450 118.655 1.00 46.27 O
ATOM 9 C3' U A2336 71.967 102.185 120.657 1.00 45.22 C
ATOM 10 O3' U A2336 73.179 102.270 121.405 1.00 44.08 O
ATOM 11 C2' U A2336 71.703 103.417 119.798 1.00 44.67 C
ATOM 12 O2' U A2336 72.856 103.902 119.147 1.00 45.97 O
ATOM 13 C1' U A2336 70.759 102.849 118.737 1.00 45.54 C
ATOM 14 N1 U A2336 69.329 103.085 119.002 1.00 44.64 N
ATOM 15 C2 U A2336 68.832 104.362 118.765 1.00 45.06 C
ATOM 16 O2 U A2336 69.527 105.286 118.351 1.00 44.84 O
ATOM 17 N3 U A2336 67.492 104.520 119.031 1.00 41.94 N
ATOM 18 C4 U A2336 66.621 103.566 119.501 1.00 41.57 C
ATOM 19 O4 U A2336 65.457 103.880 119.737 1.00 41.70 O
ATOM 20 C5 U A2336 67.203 102.276 119.718 1.00 42.97 C
ATOM 21 C6 U A2336 68.503 102.083 119.468 1.00 44.01 C
ATOM 22 P C A2337 73.141 102.780 122.933 1.00 45.99 P
ATOM 23 OP1 C A2337 74.546 102.998 123.366 1.00 44.41 O
ATOM 24 OP2 C A2337 72.256 101.888 123.734 1.00 44.54 O
ATOM 25 O5' C A2337 72.437 104.204 122.831 1.00 45.38 O
TER
ATOM 1 O3' C B2367 65.963 114.957 118.002 1.00 67.42 O
ATOM 2 P U B2368 66.549 114.063 116.794 1.00 67.51 P
ATOM 3 OP1 U B2368 66.944 115.021 115.728 1.00 69.51 O
ATOM 4 OP2 U B2368 65.577 112.979 116.477 1.00 67.13 O
ATOM 5 O5' U B2368 67.887 113.412 117.373 1.00 63.65 O
ATOM 6 C5' U B2368 69.071 114.205 117.602 1.00 58.07 C
ATOM 7 C4' U B2368 70.282 113.311 117.782 1.00 55.35 C
ATOM 8 O4' U B2368 70.083 112.438 118.925 1.00 54.28 O
ATOM 9 C3' U B2368 70.565 112.359 116.633 1.00 54.80 C
ATOM 10 O3' U B2368 71.287 112.987 115.583 1.00 53.47 O
ATOM 11 C2' U B2368 71.362 111.253 117.307 1.00 54.34 C
ATOM 12 O2' U B2368 72.722 111.571 117.497 1.00 56.85 O
ATOM 13 C1' U B2368 70.667 111.168 118.666 1.00 54.20 C
ATOM 14 N1 U B2368 69.608 110.145 118.693 1.00 54.78 N
ATOM 15 C2 U B2368 69.993 108.810 118.765 1.00 53.78 C
ATOM 16 O2 U B2368 71.158 108.454 118.823 1.00 52.68 O
ATOM 17 N3 U B2368 68.956 107.911 118.767 1.00 53.03 N
ATOM 18 C4 U B2368 67.605 108.197 118.712 1.00 54.09 C
ATOM 19 O4 U B2368 66.789 107.274 118.692 1.00 55.54 O
ATOM 20 C5 U B2368 67.290 109.591 118.650 1.00 53.50 C
ATOM 21 C6 U B2368 68.273 110.493 118.641 1.00 53.80 C
ATOM 22 P U B2369 71.064 112.505 114.067 1.00 54.19 P
ATOM 23 OP1 U B2369 72.001 113.267 113.202 1.00 55.21 O
ATOM 24 OP2 U B2369 69.607 112.541 113.770 1.00 54.33 O
ATOM 25 O5' U B2369 71.527 110.978 114.089 1.00 53.65 O
TER
Atoms:
C4: (66.621,103.566,119.501)
N3: (67.492,104.520,119.031)
OP1: (71.026,97.770,122.276)
OP2: (68.689,98.836,122.413)
C2: (68.832,104.362,118.765)
C1': (70.759,102.849,118.737)
C3': (71.967,102.185,120.657)
O5': (70.415,99.701,120.834)
O4': (70.996,101.450,118.655)
C5': (71.687,99.685,120.157)
P: (69.866,98.417,121.601)
C4': (72.006,101.066,119.627)
C2': (71.703,103.417,119.798)
O2': (72.856,103.902,119.147)
N1: (69.329,103.085,119.002)
O4: (65.457,103.880,119.737)
O2: (69.527,105.286,118.351)
C6: (68.503,102.083,119.468)
C5: (67.203,102.276,119.718)
O3': (73.179,102.270,121.405)
N3: (67.492,104.520,119.031)
OP1: (71.026,97.770,122.276)
OP2: (68.689,98.836,122.413)
C2: (68.832,104.362,118.765)
C1': (70.759,102.849,118.737)
C3': (71.967,102.185,120.657)
O5': (70.415,99.701,120.834)
O4': (70.996,101.450,118.655)
C5': (71.687,99.685,120.157)
P: (69.866,98.417,121.601)
C4': (72.006,101.066,119.627)
C2': (71.703,103.417,119.798)
O2': (72.856,103.902,119.147)
N1: (69.329,103.085,119.002)
O4: (65.457,103.880,119.737)
O2: (69.527,105.286,118.351)
C6: (68.503,102.083,119.468)
C5: (67.203,102.276,119.718)
O3': (73.179,102.270,121.405)
C4: (67.605,108.197,118.712)
N3: (68.956,107.911,118.767)
OP1: (66.944,115.021,115.728)
OP2: (65.577,112.979,116.477)
C2: (69.993,108.810,118.765)
C1': (70.667,111.168,118.666)
C3': (70.565,112.359,116.633)
O5': (67.887,113.412,117.373)
O4': (70.083,112.438,118.925)
C5': (69.071,114.205,117.602)
P: (66.549,114.063,116.794)
C4': (70.282,113.311,117.782)
C2': (71.362,111.253,117.307)
O2': (72.722,111.571,117.497)
N1: (69.608,110.145,118.693)
O4: (66.789,107.274,118.692)
O2: (71.158,108.454,118.823)
C6: (68.273,110.493,118.641)
C5: (67.290,109.591,118.650)
O3': (71.287,112.987,115.583)
N3: (68.956,107.911,118.767)
OP1: (66.944,115.021,115.728)
OP2: (65.577,112.979,116.477)
C2: (69.993,108.810,118.765)
C1': (70.667,111.168,118.666)
C3': (70.565,112.359,116.633)
O5': (67.887,113.412,117.373)
O4': (70.083,112.438,118.925)
C5': (69.071,114.205,117.602)
P: (66.549,114.063,116.794)
C4': (70.282,113.311,117.782)
C2': (71.362,111.253,117.307)
O2': (72.722,111.571,117.497)
N1: (69.608,110.145,118.693)
O4: (66.789,107.274,118.692)
O2: (71.158,108.454,118.823)
C6: (68.273,110.493,118.641)
C5: (67.290,109.591,118.650)
O3': (71.287,112.987,115.583)
Image (generated by PyMOL):