Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:W15:W25
Extra
PDB:
ATOM 1 O3' C A 14 -7.462 -9.036 29.667 1.00 72.61 O
ATOM 2 P U A 15 -5.865 -9.071 29.806 1.00 67.89 P
ATOM 3 OP1 U A 15 -5.422 -10.422 29.345 1.00 74.79 O
ATOM 4 OP2 U A 15 -5.585 -8.579 31.189 1.00 65.15 O
ATOM 5 O5' U A 15 -5.424 -7.971 28.737 1.00 65.64 O
ATOM 6 C5' U A 15 -5.676 -8.152 27.352 1.00 68.15 C
ATOM 7 C4' U A 15 -5.256 -6.918 26.609 1.00 65.48 C
ATOM 8 O4' U A 15 -6.101 -5.821 27.033 1.00 64.74 O
ATOM 9 C3' U A 15 -3.844 -6.463 26.942 1.00 61.70 C
ATOM 10 O3' U A 15 -2.856 -7.117 26.160 1.00 62.83 O
ATOM 11 C2' U A 15 -3.900 -4.946 26.776 1.00 59.14 C
ATOM 12 O2' U A 15 -3.723 -4.543 25.429 1.00 59.83 O
ATOM 13 C1' U A 15 -5.336 -4.645 27.204 1.00 60.52 C
ATOM 14 N1 U A 15 -5.272 -4.302 28.633 1.00 58.39 N
ATOM 15 C2 U A 15 -4.842 -3.025 28.951 1.00 55.36 C
ATOM 16 O2 U A 15 -4.556 -2.197 28.092 1.00 54.40 O
ATOM 17 N3 U A 15 -4.762 -2.766 30.303 1.00 54.03 N
ATOM 18 C4 U A 15 -5.054 -3.638 31.329 1.00 55.32 C
ATOM 19 O4 U A 15 -4.942 -3.274 32.501 1.00 54.30 O
ATOM 20 C5 U A 15 -5.478 -4.937 30.899 1.00 58.29 C
ATOM 21 C6 U A 15 -5.571 -5.230 29.601 1.00 59.71 C
ATOM 22 P A A 16 -1.374 -7.359 26.753 1.00 61.87 P
ATOM 23 OP1 A A 16 -0.624 -8.195 25.779 1.00 64.81 O
ATOM 24 OP2 A A 16 -1.609 -7.793 28.158 1.00 61.38 O
ATOM 25 O5' A A 16 -0.725 -5.897 26.734 1.00 59.18 O
TER
ATOM 1 O3' G B 24 -0.403 5.297 30.124 1.00 45.39 O
ATOM 2 P U B 25 -1.165 6.611 29.618 1.00 43.50 P
ATOM 3 OP1 U B 25 -0.104 7.646 29.677 1.00 42.85 O
ATOM 4 OP2 U B 25 -2.459 6.760 30.324 1.00 43.19 O
ATOM 5 O5' U B 25 -1.524 6.212 28.111 1.00 44.32 O
ATOM 6 C5' U B 25 -0.615 6.356 27.025 1.00 44.78 C
ATOM 7 C4' U B 25 -0.725 5.246 25.997 1.00 45.96 C
ATOM 8 O4' U B 25 -0.179 4.002 26.528 1.00 46.68 O
ATOM 9 C3' U B 25 -2.129 4.878 25.526 1.00 46.48 C
ATOM 10 O3' U B 25 -2.652 5.749 24.530 1.00 46.97 O
ATOM 11 C2' U B 25 -1.934 3.445 25.045 1.00 48.19 C
ATOM 12 O2' U B 25 -1.309 3.438 23.772 1.00 49.36 O
ATOM 13 C1' U B 25 -0.935 2.897 26.072 1.00 47.57 C
ATOM 14 N1 U B 25 -1.616 2.184 27.205 1.00 47.31 N
ATOM 15 C2 U B 25 -2.222 0.963 26.948 1.00 48.84 C
ATOM 16 O2 U B 25 -2.207 0.456 25.845 1.00 50.43 O
ATOM 17 N3 U B 25 -2.851 0.333 27.990 1.00 49.20 N
ATOM 18 C4 U B 25 -2.946 0.799 29.270 1.00 48.07 C
ATOM 19 O4 U B 25 -3.545 0.132 30.112 1.00 48.98 O
ATOM 20 C5 U B 25 -2.304 2.064 29.479 1.00 46.48 C
ATOM 21 C6 U B 25 -1.679 2.699 28.477 1.00 46.17 C
ATOM 22 P G B 26 -4.187 6.275 24.569 1.00 48.01 P
ATOM 23 OP1 G B 26 -4.257 7.528 23.776 1.00 47.37 O
ATOM 24 OP2 G B 26 -4.632 6.390 25.983 1.00 47.10 O
ATOM 25 O5' G B 26 -4.948 5.091 23.817 1.00 51.20 O
TER
ATOM 2 P U A 15 -5.865 -9.071 29.806 1.00 67.89 P
ATOM 3 OP1 U A 15 -5.422 -10.422 29.345 1.00 74.79 O
ATOM 4 OP2 U A 15 -5.585 -8.579 31.189 1.00 65.15 O
ATOM 5 O5' U A 15 -5.424 -7.971 28.737 1.00 65.64 O
ATOM 6 C5' U A 15 -5.676 -8.152 27.352 1.00 68.15 C
ATOM 7 C4' U A 15 -5.256 -6.918 26.609 1.00 65.48 C
ATOM 8 O4' U A 15 -6.101 -5.821 27.033 1.00 64.74 O
ATOM 9 C3' U A 15 -3.844 -6.463 26.942 1.00 61.70 C
ATOM 10 O3' U A 15 -2.856 -7.117 26.160 1.00 62.83 O
ATOM 11 C2' U A 15 -3.900 -4.946 26.776 1.00 59.14 C
ATOM 12 O2' U A 15 -3.723 -4.543 25.429 1.00 59.83 O
ATOM 13 C1' U A 15 -5.336 -4.645 27.204 1.00 60.52 C
ATOM 14 N1 U A 15 -5.272 -4.302 28.633 1.00 58.39 N
ATOM 15 C2 U A 15 -4.842 -3.025 28.951 1.00 55.36 C
ATOM 16 O2 U A 15 -4.556 -2.197 28.092 1.00 54.40 O
ATOM 17 N3 U A 15 -4.762 -2.766 30.303 1.00 54.03 N
ATOM 18 C4 U A 15 -5.054 -3.638 31.329 1.00 55.32 C
ATOM 19 O4 U A 15 -4.942 -3.274 32.501 1.00 54.30 O
ATOM 20 C5 U A 15 -5.478 -4.937 30.899 1.00 58.29 C
ATOM 21 C6 U A 15 -5.571 -5.230 29.601 1.00 59.71 C
ATOM 22 P A A 16 -1.374 -7.359 26.753 1.00 61.87 P
ATOM 23 OP1 A A 16 -0.624 -8.195 25.779 1.00 64.81 O
ATOM 24 OP2 A A 16 -1.609 -7.793 28.158 1.00 61.38 O
ATOM 25 O5' A A 16 -0.725 -5.897 26.734 1.00 59.18 O
TER
ATOM 1 O3' G B 24 -0.403 5.297 30.124 1.00 45.39 O
ATOM 2 P U B 25 -1.165 6.611 29.618 1.00 43.50 P
ATOM 3 OP1 U B 25 -0.104 7.646 29.677 1.00 42.85 O
ATOM 4 OP2 U B 25 -2.459 6.760 30.324 1.00 43.19 O
ATOM 5 O5' U B 25 -1.524 6.212 28.111 1.00 44.32 O
ATOM 6 C5' U B 25 -0.615 6.356 27.025 1.00 44.78 C
ATOM 7 C4' U B 25 -0.725 5.246 25.997 1.00 45.96 C
ATOM 8 O4' U B 25 -0.179 4.002 26.528 1.00 46.68 O
ATOM 9 C3' U B 25 -2.129 4.878 25.526 1.00 46.48 C
ATOM 10 O3' U B 25 -2.652 5.749 24.530 1.00 46.97 O
ATOM 11 C2' U B 25 -1.934 3.445 25.045 1.00 48.19 C
ATOM 12 O2' U B 25 -1.309 3.438 23.772 1.00 49.36 O
ATOM 13 C1' U B 25 -0.935 2.897 26.072 1.00 47.57 C
ATOM 14 N1 U B 25 -1.616 2.184 27.205 1.00 47.31 N
ATOM 15 C2 U B 25 -2.222 0.963 26.948 1.00 48.84 C
ATOM 16 O2 U B 25 -2.207 0.456 25.845 1.00 50.43 O
ATOM 17 N3 U B 25 -2.851 0.333 27.990 1.00 49.20 N
ATOM 18 C4 U B 25 -2.946 0.799 29.270 1.00 48.07 C
ATOM 19 O4 U B 25 -3.545 0.132 30.112 1.00 48.98 O
ATOM 20 C5 U B 25 -2.304 2.064 29.479 1.00 46.48 C
ATOM 21 C6 U B 25 -1.679 2.699 28.477 1.00 46.17 C
ATOM 22 P G B 26 -4.187 6.275 24.569 1.00 48.01 P
ATOM 23 OP1 G B 26 -4.257 7.528 23.776 1.00 47.37 O
ATOM 24 OP2 G B 26 -4.632 6.390 25.983 1.00 47.10 O
ATOM 25 O5' G B 26 -4.948 5.091 23.817 1.00 51.20 O
TER
Atoms:
C4: (-5.054,-3.638,31.329)
N3: (-4.762,-2.766,30.303)
OP1: (-5.422,-10.422,29.345)
OP2: (-5.585,-8.579,31.189)
C2: (-4.842,-3.025,28.951)
C1': (-5.336,-4.645,27.204)
C3': (-3.844,-6.463,26.942)
O5': (-5.424,-7.971,28.737)
O4': (-6.101,-5.821,27.033)
C5': (-5.676,-8.152,27.352)
P: (-5.865,-9.071,29.806)
C4': (-5.256,-6.918,26.609)
C2': (-3.900,-4.946,26.776)
O2': (-3.723,-4.543,25.429)
N1: (-5.272,-4.302,28.633)
O4: (-4.942,-3.274,32.501)
O2: (-4.556,-2.197,28.092)
C6: (-5.571,-5.230,29.601)
C5: (-5.478,-4.937,30.899)
O3': (-2.856,-7.117,26.160)
N3: (-4.762,-2.766,30.303)
OP1: (-5.422,-10.422,29.345)
OP2: (-5.585,-8.579,31.189)
C2: (-4.842,-3.025,28.951)
C1': (-5.336,-4.645,27.204)
C3': (-3.844,-6.463,26.942)
O5': (-5.424,-7.971,28.737)
O4': (-6.101,-5.821,27.033)
C5': (-5.676,-8.152,27.352)
P: (-5.865,-9.071,29.806)
C4': (-5.256,-6.918,26.609)
C2': (-3.900,-4.946,26.776)
O2': (-3.723,-4.543,25.429)
N1: (-5.272,-4.302,28.633)
O4: (-4.942,-3.274,32.501)
O2: (-4.556,-2.197,28.092)
C6: (-5.571,-5.230,29.601)
C5: (-5.478,-4.937,30.899)
O3': (-2.856,-7.117,26.160)
C4: (-2.946,0.799,29.270)
N3: (-2.851,0.333,27.990)
OP1: (-0.104,7.646,29.677)
OP2: (-2.459,6.760,30.324)
C2: (-2.222,0.963,26.948)
C1': (-0.935,2.897,26.072)
C3': (-2.129,4.878,25.526)
O5': (-1.524,6.212,28.111)
O4': (-0.179,4.002,26.528)
C5': (-0.615,6.356,27.025)
P: (-1.165,6.611,29.618)
C4': (-0.725,5.246,25.997)
C2': (-1.934,3.445,25.045)
O2': (-1.309,3.438,23.772)
N1: (-1.616,2.184,27.205)
O4: (-3.545,0.132,30.112)
O2: (-2.207,0.456,25.845)
C6: (-1.679,2.699,28.477)
C5: (-2.304,2.064,29.479)
O3': (-2.652,5.749,24.530)
N3: (-2.851,0.333,27.990)
OP1: (-0.104,7.646,29.677)
OP2: (-2.459,6.760,30.324)
C2: (-2.222,0.963,26.948)
C1': (-0.935,2.897,26.072)
C3': (-2.129,4.878,25.526)
O5': (-1.524,6.212,28.111)
O4': (-0.179,4.002,26.528)
C5': (-0.615,6.356,27.025)
P: (-1.165,6.611,29.618)
C4': (-0.725,5.246,25.997)
C2': (-1.934,3.445,25.045)
O2': (-1.309,3.438,23.772)
N1: (-1.616,2.184,27.205)
O4: (-3.545,0.132,30.112)
O2: (-2.207,0.456,25.845)
C6: (-1.679,2.699,28.477)
C5: (-2.304,2.064,29.479)
O3': (-2.652,5.749,24.530)
Image (generated by PyMOL):