Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNR:C5:D17
Extra
PDB:
ATOM 1 O3' G A 4 -28.633 -16.774 9.783 1.00 38.63 O
ATOM 2 P U A 5 -28.146 -15.538 10.684 1.00 38.37 P
ATOM 3 OP1 U A 5 -29.340 -14.699 10.943 1.00 38.04 O
ATOM 4 OP2 U A 5 -26.951 -14.937 10.037 1.00 40.06 O
ATOM 5 O5' U A 5 -27.665 -16.193 12.057 1.00 38.69 O
ATOM 6 C5' U A 5 -28.576 -16.872 12.922 1.00 38.09 C
ATOM 7 C4' U A 5 -27.844 -17.421 14.130 1.00 36.92 C
ATOM 8 O4' U A 5 -26.853 -18.391 13.693 1.00 37.22 O
ATOM 9 C3' U A 5 -27.050 -16.418 14.954 1.00 37.41 C
ATOM 10 O3' U A 5 -27.873 -15.782 15.922 1.00 37.91 O
ATOM 11 C2' U A 5 -26.008 -17.305 15.622 1.00 35.67 C
ATOM 12 O2' U A 5 -26.509 -18.008 16.735 1.00 37.71 O
ATOM 13 C1' U A 5 -25.687 -18.288 14.498 1.00 35.89 C
ATOM 14 N1 U A 5 -24.568 -17.856 13.646 1.00 33.70 N
ATOM 15 C2 U A 5 -23.281 -18.007 14.146 1.00 33.19 C
ATOM 16 O2 U A 5 -23.049 -18.467 15.248 1.00 35.05 O
ATOM 17 N3 U A 5 -22.278 -17.597 13.303 1.00 29.85 N
ATOM 18 C4 U A 5 -22.422 -17.061 12.042 1.00 33.14 C
ATOM 19 O4 U A 5 -21.417 -16.774 11.390 1.00 33.66 O
ATOM 20 C5 U A 5 -23.783 -16.928 11.598 1.00 33.34 C
ATOM 21 C6 U A 5 -24.784 -17.323 12.398 1.00 32.23 C
ATOM 22 P C A 6 -27.589 -14.255 16.323 1.00 39.21 P
ATOM 23 OP1 C A 6 -28.852 -13.688 16.861 1.00 41.41 O
ATOM 24 OP2 C A 6 -26.919 -13.597 15.173 1.00 39.31 O
ATOM 25 O5' C A 6 -26.530 -14.353 17.504 1.00 37.92 O
TER
ATOM 1 O3' G B 16 -12.533 -20.597 16.710 1.00 46.98 O
ATOM 2 P U B 17 -13.677 -21.718 16.607 1.00 48.52 P
ATOM 3 OP1 U B 17 -13.102 -22.909 17.279 1.00 50.79 O
ATOM 4 OP2 U B 17 -14.159 -21.822 15.211 1.00 48.45 O
ATOM 5 O5' U B 17 -14.872 -21.170 17.512 1.00 47.96 O
ATOM 6 C5' U B 17 -14.745 -21.129 18.932 1.00 45.04 C
ATOM 7 C4' U B 17 -16.088 -20.898 19.574 1.00 43.99 C
ATOM 8 O4' U B 17 -16.622 -19.632 19.121 1.00 43.31 O
ATOM 9 C3' U B 17 -17.178 -21.901 19.230 1.00 43.85 C
ATOM 10 O3' U B 17 -17.097 -23.035 20.082 1.00 45.32 O
ATOM 11 C2' U B 17 -18.449 -21.109 19.512 1.00 43.30 C
ATOM 12 O2' U B 17 -18.837 -21.116 20.868 1.00 42.81 O
ATOM 13 C1' U B 17 -18.037 -19.699 19.090 1.00 42.90 C
ATOM 14 N1 U B 17 -18.489 -19.366 17.733 1.00 41.89 N
ATOM 15 C2 U B 17 -19.835 -19.119 17.561 1.00 41.68 C
ATOM 16 O2 U B 17 -20.644 -19.198 18.472 1.00 41.65 O
ATOM 17 N3 U B 17 -20.200 -18.779 16.284 1.00 40.44 N
ATOM 18 C4 U B 17 -19.375 -18.672 15.186 1.00 39.92 C
ATOM 19 O4 U B 17 -19.845 -18.275 14.120 1.00 39.47 O
ATOM 20 C5 U B 17 -17.997 -18.972 15.440 1.00 39.77 C
ATOM 21 C6 U B 17 -17.610 -19.298 16.675 1.00 40.74 C
ATOM 22 P C B 18 -17.604 -24.464 19.554 1.00 44.71 P
ATOM 23 OP1 C B 18 -17.415 -25.422 20.666 1.00 45.57 O
ATOM 24 OP2 C B 18 -16.971 -24.728 18.237 1.00 44.64 O
ATOM 25 O5' C B 18 -19.164 -24.262 19.339 1.00 43.41 O
TER
ATOM 2 P U A 5 -28.146 -15.538 10.684 1.00 38.37 P
ATOM 3 OP1 U A 5 -29.340 -14.699 10.943 1.00 38.04 O
ATOM 4 OP2 U A 5 -26.951 -14.937 10.037 1.00 40.06 O
ATOM 5 O5' U A 5 -27.665 -16.193 12.057 1.00 38.69 O
ATOM 6 C5' U A 5 -28.576 -16.872 12.922 1.00 38.09 C
ATOM 7 C4' U A 5 -27.844 -17.421 14.130 1.00 36.92 C
ATOM 8 O4' U A 5 -26.853 -18.391 13.693 1.00 37.22 O
ATOM 9 C3' U A 5 -27.050 -16.418 14.954 1.00 37.41 C
ATOM 10 O3' U A 5 -27.873 -15.782 15.922 1.00 37.91 O
ATOM 11 C2' U A 5 -26.008 -17.305 15.622 1.00 35.67 C
ATOM 12 O2' U A 5 -26.509 -18.008 16.735 1.00 37.71 O
ATOM 13 C1' U A 5 -25.687 -18.288 14.498 1.00 35.89 C
ATOM 14 N1 U A 5 -24.568 -17.856 13.646 1.00 33.70 N
ATOM 15 C2 U A 5 -23.281 -18.007 14.146 1.00 33.19 C
ATOM 16 O2 U A 5 -23.049 -18.467 15.248 1.00 35.05 O
ATOM 17 N3 U A 5 -22.278 -17.597 13.303 1.00 29.85 N
ATOM 18 C4 U A 5 -22.422 -17.061 12.042 1.00 33.14 C
ATOM 19 O4 U A 5 -21.417 -16.774 11.390 1.00 33.66 O
ATOM 20 C5 U A 5 -23.783 -16.928 11.598 1.00 33.34 C
ATOM 21 C6 U A 5 -24.784 -17.323 12.398 1.00 32.23 C
ATOM 22 P C A 6 -27.589 -14.255 16.323 1.00 39.21 P
ATOM 23 OP1 C A 6 -28.852 -13.688 16.861 1.00 41.41 O
ATOM 24 OP2 C A 6 -26.919 -13.597 15.173 1.00 39.31 O
ATOM 25 O5' C A 6 -26.530 -14.353 17.504 1.00 37.92 O
TER
ATOM 1 O3' G B 16 -12.533 -20.597 16.710 1.00 46.98 O
ATOM 2 P U B 17 -13.677 -21.718 16.607 1.00 48.52 P
ATOM 3 OP1 U B 17 -13.102 -22.909 17.279 1.00 50.79 O
ATOM 4 OP2 U B 17 -14.159 -21.822 15.211 1.00 48.45 O
ATOM 5 O5' U B 17 -14.872 -21.170 17.512 1.00 47.96 O
ATOM 6 C5' U B 17 -14.745 -21.129 18.932 1.00 45.04 C
ATOM 7 C4' U B 17 -16.088 -20.898 19.574 1.00 43.99 C
ATOM 8 O4' U B 17 -16.622 -19.632 19.121 1.00 43.31 O
ATOM 9 C3' U B 17 -17.178 -21.901 19.230 1.00 43.85 C
ATOM 10 O3' U B 17 -17.097 -23.035 20.082 1.00 45.32 O
ATOM 11 C2' U B 17 -18.449 -21.109 19.512 1.00 43.30 C
ATOM 12 O2' U B 17 -18.837 -21.116 20.868 1.00 42.81 O
ATOM 13 C1' U B 17 -18.037 -19.699 19.090 1.00 42.90 C
ATOM 14 N1 U B 17 -18.489 -19.366 17.733 1.00 41.89 N
ATOM 15 C2 U B 17 -19.835 -19.119 17.561 1.00 41.68 C
ATOM 16 O2 U B 17 -20.644 -19.198 18.472 1.00 41.65 O
ATOM 17 N3 U B 17 -20.200 -18.779 16.284 1.00 40.44 N
ATOM 18 C4 U B 17 -19.375 -18.672 15.186 1.00 39.92 C
ATOM 19 O4 U B 17 -19.845 -18.275 14.120 1.00 39.47 O
ATOM 20 C5 U B 17 -17.997 -18.972 15.440 1.00 39.77 C
ATOM 21 C6 U B 17 -17.610 -19.298 16.675 1.00 40.74 C
ATOM 22 P C B 18 -17.604 -24.464 19.554 1.00 44.71 P
ATOM 23 OP1 C B 18 -17.415 -25.422 20.666 1.00 45.57 O
ATOM 24 OP2 C B 18 -16.971 -24.728 18.237 1.00 44.64 O
ATOM 25 O5' C B 18 -19.164 -24.262 19.339 1.00 43.41 O
TER
Atoms:
C4: (-22.422,-17.061,12.042)
N3: (-22.278,-17.597,13.303)
OP1: (-29.340,-14.699,10.943)
OP2: (-26.951,-14.937,10.037)
C2: (-23.281,-18.007,14.146)
C1': (-25.687,-18.288,14.498)
C3': (-27.050,-16.418,14.954)
O5': (-27.665,-16.193,12.057)
O4': (-26.853,-18.391,13.693)
C5': (-28.576,-16.872,12.922)
P: (-28.146,-15.538,10.684)
C4': (-27.844,-17.421,14.130)
C2': (-26.008,-17.305,15.622)
O2': (-26.509,-18.008,16.735)
N1: (-24.568,-17.856,13.646)
O4: (-21.417,-16.774,11.390)
O2: (-23.049,-18.467,15.248)
C6: (-24.784,-17.323,12.398)
C5: (-23.783,-16.928,11.598)
O3': (-27.873,-15.782,15.922)
N3: (-22.278,-17.597,13.303)
OP1: (-29.340,-14.699,10.943)
OP2: (-26.951,-14.937,10.037)
C2: (-23.281,-18.007,14.146)
C1': (-25.687,-18.288,14.498)
C3': (-27.050,-16.418,14.954)
O5': (-27.665,-16.193,12.057)
O4': (-26.853,-18.391,13.693)
C5': (-28.576,-16.872,12.922)
P: (-28.146,-15.538,10.684)
C4': (-27.844,-17.421,14.130)
C2': (-26.008,-17.305,15.622)
O2': (-26.509,-18.008,16.735)
N1: (-24.568,-17.856,13.646)
O4: (-21.417,-16.774,11.390)
O2: (-23.049,-18.467,15.248)
C6: (-24.784,-17.323,12.398)
C5: (-23.783,-16.928,11.598)
O3': (-27.873,-15.782,15.922)
C4: (-19.375,-18.672,15.186)
N3: (-20.200,-18.779,16.284)
OP1: (-13.102,-22.909,17.279)
OP2: (-14.159,-21.822,15.211)
C2: (-19.835,-19.119,17.561)
C1': (-18.037,-19.699,19.090)
C3': (-17.178,-21.901,19.230)
O5': (-14.872,-21.170,17.512)
O4': (-16.622,-19.632,19.121)
C5': (-14.745,-21.129,18.932)
P: (-13.677,-21.718,16.607)
C4': (-16.088,-20.898,19.574)
C2': (-18.449,-21.109,19.512)
O2': (-18.837,-21.116,20.868)
N1: (-18.489,-19.366,17.733)
O4: (-19.845,-18.275,14.120)
O2: (-20.644,-19.198,18.472)
C6: (-17.610,-19.298,16.675)
C5: (-17.997,-18.972,15.440)
O3': (-17.097,-23.035,20.082)
N3: (-20.200,-18.779,16.284)
OP1: (-13.102,-22.909,17.279)
OP2: (-14.159,-21.822,15.211)
C2: (-19.835,-19.119,17.561)
C1': (-18.037,-19.699,19.090)
C3': (-17.178,-21.901,19.230)
O5': (-14.872,-21.170,17.512)
O4': (-16.622,-19.632,19.121)
C5': (-14.745,-21.129,18.932)
P: (-13.677,-21.718,16.607)
C4': (-16.088,-20.898,19.574)
C2': (-18.449,-21.109,19.512)
O2': (-18.837,-21.116,20.868)
N1: (-18.489,-19.366,17.733)
O4: (-19.845,-18.275,14.120)
O2: (-20.644,-19.198,18.472)
C6: (-17.610,-19.298,16.675)
C5: (-17.997,-18.972,15.440)
O3': (-17.097,-23.035,20.082)
Image (generated by PyMOL):