Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0274:0354
Extra
PDB:
ATOM 1 O3' A A 273 63.760 105.247 0.829 1.00118.48 O
ATOM 2 P U A 274 63.415 106.707 1.411 1.00116.17 P
ATOM 3 OP1 U A 274 62.721 106.534 2.713 1.00116.38 O
ATOM 4 OP2 U A 274 62.763 107.493 0.331 1.00116.17 O
ATOM 5 O5' U A 274 64.845 107.348 1.691 1.00113.81 O
ATOM 6 C5' U A 274 65.810 106.647 2.489 1.00110.66 C
ATOM 7 C4' U A 274 67.199 107.147 2.193 1.00107.97 C
ATOM 8 O4' U A 274 67.507 106.926 0.793 1.00106.94 O
ATOM 9 C3' U A 274 67.403 108.635 2.400 1.00106.90 C
ATOM 10 O3' U A 274 67.669 108.908 3.773 1.00107.14 O
ATOM 11 C2' U A 274 68.586 108.932 1.484 1.00106.30 C
ATOM 12 O2' U A 274 69.837 108.579 2.040 1.00105.37 O
ATOM 13 C1' U A 274 68.293 108.001 0.303 1.00106.05 C
ATOM 14 N1 U A 274 67.566 108.642 -0.806 1.00104.92 N
ATOM 15 C2 U A 274 68.306 109.335 -1.755 1.00103.80 C
ATOM 16 O2 U A 274 69.523 109.435 -1.712 1.00102.16 O
ATOM 17 N3 U A 274 67.566 109.906 -2.759 1.00103.75 N
ATOM 18 C4 U A 274 66.195 109.859 -2.914 1.00104.19 C
ATOM 19 O4 U A 274 65.674 110.428 -3.876 1.00104.47 O
ATOM 20 C5 U A 274 65.503 109.128 -1.898 1.00104.28 C
ATOM 21 C6 U A 274 66.191 108.561 -0.905 1.00104.34 C
ATOM 22 P C A 275 67.163 110.284 4.430 1.00107.59 P
ATOM 23 OP1 C A 275 67.505 110.235 5.879 1.00107.04 O
ATOM 24 OP2 C A 275 65.756 110.521 4.013 1.00107.18 O
ATOM 25 O5' C A 275 68.089 111.385 3.747 1.00107.15 O
TER
ATOM 1 O3' G B 353 68.799 116.029 -11.762 1.00106.42 O
ATOM 2 P U B 354 69.210 114.528 -12.179 1.00107.67 P
ATOM 3 OP1 U B 354 70.336 114.621 -13.147 1.00106.96 O
ATOM 4 OP2 U B 354 67.974 113.784 -12.554 1.00107.03 O
ATOM 5 O5' U B 354 69.780 113.899 -10.831 1.00107.12 O
ATOM 6 C5' U B 354 70.971 114.428 -10.213 1.00106.30 C
ATOM 7 C4' U B 354 71.250 113.702 -8.922 1.00105.68 C
ATOM 8 O4' U B 354 70.179 113.961 -7.980 1.00104.71 O
ATOM 9 C3' U B 354 71.301 112.188 -9.034 1.00105.95 C
ATOM 10 O3' U B 354 72.599 111.769 -9.459 1.00107.74 O
ATOM 11 C2' U B 354 70.973 111.743 -7.613 1.00104.83 C
ATOM 12 O2' U B 354 72.089 111.816 -6.750 1.00104.30 O
ATOM 13 C1' U B 354 69.956 112.808 -7.187 1.00104.07 C
ATOM 14 N1 U B 354 68.536 112.425 -7.297 1.00103.33 N
ATOM 15 C2 U B 354 67.970 111.721 -6.242 1.00102.31 C
ATOM 16 O2 U B 354 68.598 111.382 -5.255 1.00102.38 O
ATOM 17 N3 U B 354 66.636 111.428 -6.389 1.00101.58 N
ATOM 18 C4 U B 354 65.825 111.751 -7.456 1.00101.94 C
ATOM 19 O4 U B 354 64.637 111.425 -7.434 1.00101.49 O
ATOM 20 C5 U B 354 66.482 112.461 -8.511 1.00102.46 C
ATOM 21 C6 U B 354 67.781 112.765 -8.401 1.00103.14 C
ATOM 22 P G B 355 72.754 110.641 -10.599 1.00108.10 P
ATOM 23 OP1 G B 355 74.185 110.638 -10.999 1.00108.23 O
ATOM 24 OP2 G B 355 71.705 110.837 -11.632 1.00107.48 O
ATOM 25 O5' G B 355 72.458 109.273 -9.837 1.00108.61 O
TER
ATOM 2 P U A 274 63.415 106.707 1.411 1.00116.17 P
ATOM 3 OP1 U A 274 62.721 106.534 2.713 1.00116.38 O
ATOM 4 OP2 U A 274 62.763 107.493 0.331 1.00116.17 O
ATOM 5 O5' U A 274 64.845 107.348 1.691 1.00113.81 O
ATOM 6 C5' U A 274 65.810 106.647 2.489 1.00110.66 C
ATOM 7 C4' U A 274 67.199 107.147 2.193 1.00107.97 C
ATOM 8 O4' U A 274 67.507 106.926 0.793 1.00106.94 O
ATOM 9 C3' U A 274 67.403 108.635 2.400 1.00106.90 C
ATOM 10 O3' U A 274 67.669 108.908 3.773 1.00107.14 O
ATOM 11 C2' U A 274 68.586 108.932 1.484 1.00106.30 C
ATOM 12 O2' U A 274 69.837 108.579 2.040 1.00105.37 O
ATOM 13 C1' U A 274 68.293 108.001 0.303 1.00106.05 C
ATOM 14 N1 U A 274 67.566 108.642 -0.806 1.00104.92 N
ATOM 15 C2 U A 274 68.306 109.335 -1.755 1.00103.80 C
ATOM 16 O2 U A 274 69.523 109.435 -1.712 1.00102.16 O
ATOM 17 N3 U A 274 67.566 109.906 -2.759 1.00103.75 N
ATOM 18 C4 U A 274 66.195 109.859 -2.914 1.00104.19 C
ATOM 19 O4 U A 274 65.674 110.428 -3.876 1.00104.47 O
ATOM 20 C5 U A 274 65.503 109.128 -1.898 1.00104.28 C
ATOM 21 C6 U A 274 66.191 108.561 -0.905 1.00104.34 C
ATOM 22 P C A 275 67.163 110.284 4.430 1.00107.59 P
ATOM 23 OP1 C A 275 67.505 110.235 5.879 1.00107.04 O
ATOM 24 OP2 C A 275 65.756 110.521 4.013 1.00107.18 O
ATOM 25 O5' C A 275 68.089 111.385 3.747 1.00107.15 O
TER
ATOM 1 O3' G B 353 68.799 116.029 -11.762 1.00106.42 O
ATOM 2 P U B 354 69.210 114.528 -12.179 1.00107.67 P
ATOM 3 OP1 U B 354 70.336 114.621 -13.147 1.00106.96 O
ATOM 4 OP2 U B 354 67.974 113.784 -12.554 1.00107.03 O
ATOM 5 O5' U B 354 69.780 113.899 -10.831 1.00107.12 O
ATOM 6 C5' U B 354 70.971 114.428 -10.213 1.00106.30 C
ATOM 7 C4' U B 354 71.250 113.702 -8.922 1.00105.68 C
ATOM 8 O4' U B 354 70.179 113.961 -7.980 1.00104.71 O
ATOM 9 C3' U B 354 71.301 112.188 -9.034 1.00105.95 C
ATOM 10 O3' U B 354 72.599 111.769 -9.459 1.00107.74 O
ATOM 11 C2' U B 354 70.973 111.743 -7.613 1.00104.83 C
ATOM 12 O2' U B 354 72.089 111.816 -6.750 1.00104.30 O
ATOM 13 C1' U B 354 69.956 112.808 -7.187 1.00104.07 C
ATOM 14 N1 U B 354 68.536 112.425 -7.297 1.00103.33 N
ATOM 15 C2 U B 354 67.970 111.721 -6.242 1.00102.31 C
ATOM 16 O2 U B 354 68.598 111.382 -5.255 1.00102.38 O
ATOM 17 N3 U B 354 66.636 111.428 -6.389 1.00101.58 N
ATOM 18 C4 U B 354 65.825 111.751 -7.456 1.00101.94 C
ATOM 19 O4 U B 354 64.637 111.425 -7.434 1.00101.49 O
ATOM 20 C5 U B 354 66.482 112.461 -8.511 1.00102.46 C
ATOM 21 C6 U B 354 67.781 112.765 -8.401 1.00103.14 C
ATOM 22 P G B 355 72.754 110.641 -10.599 1.00108.10 P
ATOM 23 OP1 G B 355 74.185 110.638 -10.999 1.00108.23 O
ATOM 24 OP2 G B 355 71.705 110.837 -11.632 1.00107.48 O
ATOM 25 O5' G B 355 72.458 109.273 -9.837 1.00108.61 O
TER
Atoms:
C4: (66.195,109.859,-2.914)
N3: (67.566,109.906,-2.759)
OP1: (62.721,106.534,2.713)
OP2: (62.763,107.493,0.331)
C2: (68.306,109.335,-1.755)
C1': (68.293,108.001,0.303)
C3': (67.403,108.635,2.400)
O5': (64.845,107.348,1.691)
O4': (67.507,106.926,0.793)
C5': (65.810,106.647,2.489)
P: (63.415,106.707,1.411)
C4': (67.199,107.147,2.193)
C2': (68.586,108.932,1.484)
O2': (69.837,108.579,2.040)
N1: (67.566,108.642,-0.806)
O4: (65.674,110.428,-3.876)
O2: (69.523,109.435,-1.712)
C6: (66.191,108.561,-0.905)
C5: (65.503,109.128,-1.898)
O3': (67.669,108.908,3.773)
N3: (67.566,109.906,-2.759)
OP1: (62.721,106.534,2.713)
OP2: (62.763,107.493,0.331)
C2: (68.306,109.335,-1.755)
C1': (68.293,108.001,0.303)
C3': (67.403,108.635,2.400)
O5': (64.845,107.348,1.691)
O4': (67.507,106.926,0.793)
C5': (65.810,106.647,2.489)
P: (63.415,106.707,1.411)
C4': (67.199,107.147,2.193)
C2': (68.586,108.932,1.484)
O2': (69.837,108.579,2.040)
N1: (67.566,108.642,-0.806)
O4: (65.674,110.428,-3.876)
O2: (69.523,109.435,-1.712)
C6: (66.191,108.561,-0.905)
C5: (65.503,109.128,-1.898)
O3': (67.669,108.908,3.773)
C4: (65.825,111.751,-7.456)
N3: (66.636,111.428,-6.389)
OP1: (70.336,114.621,-13.147)
OP2: (67.974,113.784,-12.554)
C2: (67.970,111.721,-6.242)
C1': (69.956,112.808,-7.187)
C3': (71.301,112.188,-9.034)
O5': (69.780,113.899,-10.831)
O4': (70.179,113.961,-7.980)
C5': (70.971,114.428,-10.213)
P: (69.210,114.528,-12.179)
C4': (71.250,113.702,-8.922)
C2': (70.973,111.743,-7.613)
O2': (72.089,111.816,-6.750)
N1: (68.536,112.425,-7.297)
O4: (64.637,111.425,-7.434)
O2: (68.598,111.382,-5.255)
C6: (67.781,112.765,-8.401)
C5: (66.482,112.461,-8.511)
O3': (72.599,111.769,-9.459)
N3: (66.636,111.428,-6.389)
OP1: (70.336,114.621,-13.147)
OP2: (67.974,113.784,-12.554)
C2: (67.970,111.721,-6.242)
C1': (69.956,112.808,-7.187)
C3': (71.301,112.188,-9.034)
O5': (69.780,113.899,-10.831)
O4': (70.179,113.961,-7.980)
C5': (70.971,114.428,-10.213)
P: (69.210,114.528,-12.179)
C4': (71.250,113.702,-8.922)
C2': (70.973,111.743,-7.613)
O2': (72.089,111.816,-6.750)
N1: (68.536,112.425,-7.297)
O4: (64.637,111.425,-7.434)
O2: (68.598,111.382,-5.255)
C6: (67.781,112.765,-8.401)
C5: (66.482,112.461,-8.511)
O3': (72.599,111.769,-9.459)
Image (generated by PyMOL):