ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2O3W:A4:B17

Extra

PDB:
ATOM 1 O3' G A 3 1.548 5.064 -10.395 1.00 93.73 O
ATOM 2 P U A 4 2.089 4.765 -8.913 1.00 93.15 P
ATOM 3 OP1 U A 4 1.042 4.003 -8.189 1.00 94.49 O
ATOM 4 OP2 U A 4 2.574 6.053 -8.352 1.00 93.72 O
ATOM 5 O5' U A 4 3.335 3.798 -9.140 1.00 90.32 O
ATOM 6 C5' U A 4 3.137 2.417 -9.395 1.00 88.91 C
ATOM 7 C4' U A 4 4.443 1.672 -9.297 1.00 87.56 C
ATOM 8 O4' U A 4 5.342 2.137 -10.336 1.00 87.26 O
ATOM 9 C3' U A 4 5.225 1.878 -8.014 1.00 87.72 C
ATOM 10 O3' U A 4 4.749 1.030 -6.980 1.00 88.30 O
ATOM 11 C2' U A 4 6.635 1.515 -8.455 1.00 87.15 C
ATOM 12 O2' U A 4 6.816 0.115 -8.544 1.00 85.93 O
ATOM 13 C1' U A 4 6.679 2.144 -9.851 1.00 86.60 C
ATOM 14 N1 U A 4 7.155 3.539 -9.867 1.00 85.09 N
ATOM 15 C2 U A 4 8.521 3.784 -9.935 1.00 83.78 C
ATOM 16 O2 U A 4 9.365 2.903 -9.970 1.00 83.39 O
ATOM 17 N3 U A 4 8.864 5.111 -9.955 1.00 83.62 N
ATOM 18 C4 U A 4 8.019 6.195 -9.903 1.00 83.69 C
ATOM 19 O4 U A 4 8.494 7.333 -9.890 1.00 85.08 O
ATOM 20 C5 U A 4 6.633 5.864 -9.830 1.00 83.88 C
ATOM 21 C6 U A 4 6.257 4.582 -9.816 1.00 84.81 C
ATOM 22 P C A 5 4.834 1.519 -5.450 1.00 89.39 P
ATOM 23 OP1 C A 5 3.914 0.665 -4.656 1.00 89.73 O
ATOM 24 OP2 C A 5 4.668 2.998 -5.419 1.00 89.60 O
ATOM 25 O5' C A 5 6.313 1.120 -5.019 1.00 87.94 O
TER

ATOM 1 O3' G B 16 20.042 6.394 -10.488 1.00 68.26 O
ATOM 2 P U B 17 19.552 5.916 -11.941 1.00 72.85 P
ATOM 3 OP1 U B 17 20.745 5.352 -12.629 1.00 72.07 O
ATOM 4 OP2 U B 17 18.777 7.006 -12.588 1.00 71.75 O
ATOM 5 O5' U B 17 18.533 4.744 -11.595 1.00 70.35 O
ATOM 6 C5' U B 17 18.956 3.665 -10.784 1.00 69.17 C
ATOM 7 C4' U B 17 17.847 2.673 -10.615 1.00 67.62 C
ATOM 8 O4' U B 17 16.800 3.223 -9.790 1.00 66.70 O
ATOM 9 C3' U B 17 17.096 2.300 -11.871 1.00 69.37 C
ATOM 10 O3' U B 17 17.855 1.410 -12.664 1.00 74.32 O
ATOM 11 C2' U B 17 15.842 1.655 -11.296 1.00 66.97 C
ATOM 12 O2' U B 17 16.032 0.314 -10.897 1.00 63.46 O
ATOM 13 C1' U B 17 15.598 2.524 -10.061 1.00 64.81 C
ATOM 14 N1 U B 17 14.507 3.491 -10.225 1.00 61.78 N
ATOM 15 C2 U B 17 13.225 3.018 -10.039 1.00 61.60 C
ATOM 16 O2 U B 17 12.986 1.849 -9.796 1.00 64.00 O
ATOM 17 N3 U B 17 12.234 3.956 -10.153 1.00 60.26 N
ATOM 18 C4 U B 17 12.395 5.294 -10.441 1.00 60.96 C
ATOM 19 O4 U B 17 11.401 6.022 -10.478 1.00 60.92 O
ATOM 20 C5 U B 17 13.760 5.707 -10.648 1.00 59.53 C
ATOM 21 C6 U B 17 14.743 4.807 -10.535 1.00 60.04 C
ATOM 22 P C B 18 17.719 1.464 -14.261 1.00 77.97 P
ATOM 23 OP1 C B 18 18.800 0.575 -14.762 1.00 77.00 O
ATOM 24 OP2 C B 18 17.660 2.880 -14.718 1.00 77.75 O
ATOM 25 O5' C B 18 16.297 0.795 -14.536 1.00 77.05 O
TER

Atoms:
C4: (8.019,6.195,-9.903)
N3: (8.864,5.111,-9.955)
OP1: (1.042,4.003,-8.189)
OP2: (2.574,6.053,-8.352)
C2: (8.521,3.784,-9.935)
C1': (6.679,2.144,-9.851)
C3': (5.225,1.878,-8.014)
O5': (3.335,3.798,-9.140)
O4': (5.342,2.137,-10.336)
C5': (3.137,2.417,-9.395)
P: (2.089,4.765,-8.913)
C4': (4.443,1.672,-9.297)
C2': (6.635,1.515,-8.455)
O2': (6.816,0.115,-8.544)
N1: (7.155,3.539,-9.867)
O4: (8.494,7.333,-9.890)
O2: (9.365,2.903,-9.970)
C6: (6.257,4.582,-9.816)
C5: (6.633,5.864,-9.830)
O3': (4.749,1.030,-6.980)
C4: (12.395,5.294,-10.441)
N3: (12.234,3.956,-10.153)
OP1: (20.745,5.352,-12.629)
OP2: (18.777,7.006,-12.588)
C2: (13.225,3.018,-10.039)
C1': (15.598,2.524,-10.061)
C3': (17.096,2.300,-11.871)
O5': (18.533,4.744,-11.595)
O4': (16.800,3.223,-9.790)
C5': (18.956,3.665,-10.784)
P: (19.552,5.916,-11.941)
C4': (17.847,2.673,-10.615)
C2': (15.842,1.655,-11.296)
O2': (16.032,0.314,-10.897)
N1: (14.507,3.491,-10.225)
O4: (11.401,6.022,-10.478)
O2: (12.986,1.849,-9.796)
C6: (14.743,4.807,-10.535)
C5: (13.760,5.707,-10.648)
O3': (17.855,1.410,-12.664)
Image (generated by PyMOL):
PyMOL image
show in jmol