ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZX7:C9:D4

Extra

PDB:
ATOM 1 O3' G A 8 42.156 12.019 19.967 1.00 19.54 O
ATOM 2 P U A 9 42.031 13.366 19.107 1.00 23.57 P
ATOM 3 OP1 U A 9 43.395 13.988 19.109 1.00 21.04 O
ATOM 4 OP2 U A 9 40.865 14.153 19.569 1.00 19.90 O
ATOM 5 O5' U A 9 41.688 12.870 17.632 1.00 22.67 O
ATOM 6 C5' U A 9 42.716 12.460 16.736 1.00 23.10 C
ATOM 7 C4' U A 9 42.165 12.333 15.334 1.00 22.38 C
ATOM 8 O4' U A 9 41.068 11.383 15.351 1.00 23.95 O
ATOM 9 C3' U A 9 41.552 13.592 14.743 1.00 23.76 C
ATOM 10 O3' U A 9 42.563 14.390 14.133 1.00 27.18 O
ATOM 11 C2' U A 9 40.602 13.015 13.698 1.00 22.30 C
ATOM 12 O2' U A 9 41.276 12.577 12.542 1.00 21.33 O
ATOM 13 C1' U A 9 40.075 11.777 14.422 1.00 21.34 C
ATOM 14 N1 U A 9 38.816 11.997 15.149 1.00 20.01 N
ATOM 15 C2 U A 9 37.630 11.872 14.437 1.00 20.35 C
ATOM 16 O2 U A 9 37.599 11.677 13.234 1.00 20.95 O
ATOM 17 N3 U A 9 36.485 11.987 15.188 1.00 20.46 N
ATOM 18 C4 U A 9 36.407 12.224 16.546 1.00 19.32 C
ATOM 19 O4 U A 9 35.323 12.123 17.106 1.00 17.64 O
ATOM 20 C5 U A 9 37.676 12.408 17.194 1.00 20.92 C
ATOM 21 C6 U A 9 38.807 12.289 16.489 1.00 18.48 C
ATOM 22 P C A 10 42.502 15.992 14.253 1.00 28.82 P
ATOM 23 OP1 C A 10 43.872 16.482 13.918 1.00 28.85 O
ATOM 24 OP2 C A 10 41.891 16.350 15.556 1.00 28.33 O
ATOM 25 O5' C A 10 41.498 16.445 13.098 1.00 25.10 O
TER

ATOM 1 O3' G B 3 28.192 10.357 7.869 1.00 20.16 O
ATOM 2 P U B 4 29.106 9.107 8.299 1.00 20.42 P
ATOM 3 OP1 U B 4 28.708 7.982 7.417 1.00 18.26 O
ATOM 4 OP2 U B 4 29.041 8.958 9.767 1.00 14.22 O
ATOM 5 O5' U B 4 30.587 9.546 7.901 1.00 18.42 O
ATOM 6 C5' U B 4 30.875 9.966 6.569 1.00 18.60 C
ATOM 7 C4' U B 4 32.327 10.371 6.433 1.00 17.43 C
ATOM 8 O4' U B 4 32.609 11.543 7.258 1.00 18.02 O
ATOM 9 C3' U B 4 33.368 9.353 6.876 1.00 17.07 C
ATOM 10 O3' U B 4 33.583 8.374 5.854 1.00 21.00 O
ATOM 11 C2' U B 4 34.588 10.256 7.042 1.00 14.36 C
ATOM 12 O2' U B 4 35.074 10.673 5.789 1.00 10.39 O
ATOM 13 C1' U B 4 33.969 11.499 7.683 1.00 16.38 C
ATOM 14 N1 U B 4 34.026 11.503 9.157 1.00 17.82 N
ATOM 15 C2 U B 4 35.254 11.768 9.758 1.00 18.40 C
ATOM 16 O2 U B 4 36.277 11.942 9.122 1.00 17.10 O
ATOM 17 N3 U B 4 35.233 11.827 11.132 1.00 17.70 N
ATOM 18 C4 U B 4 34.136 11.667 11.954 1.00 20.52 C
ATOM 19 O4 U B 4 34.232 11.975 13.146 1.00 19.89 O
ATOM 20 C5 U B 4 32.915 11.351 11.260 1.00 20.19 C
ATOM 21 C6 U B 4 32.906 11.278 9.919 1.00 17.57 C
ATOM 22 P C B 5 33.399 6.810 6.187 1.00 22.51 P
ATOM 23 OP1 C B 5 33.407 6.091 4.884 1.00 25.25 O
ATOM 24 OP2 C B 5 32.232 6.653 7.097 1.00 23.55 O
ATOM 25 O5' C B 5 34.726 6.439 6.986 1.00 23.11 O
TER

Atoms:
C4: (36.407,12.224,16.546)
N3: (36.485,11.987,15.188)
OP1: (43.395,13.988,19.109)
OP2: (40.865,14.153,19.569)
C2: (37.630,11.872,14.437)
C1': (40.075,11.777,14.422)
C3': (41.552,13.592,14.743)
O5': (41.688,12.870,17.632)
O4': (41.068,11.383,15.351)
C5': (42.716,12.460,16.736)
P: (42.031,13.366,19.107)
C4': (42.165,12.333,15.334)
C2': (40.602,13.015,13.698)
O2': (41.276,12.577,12.542)
N1: (38.816,11.997,15.149)
O4: (35.323,12.123,17.106)
O2: (37.599,11.677,13.234)
C6: (38.807,12.289,16.489)
C5: (37.676,12.408,17.194)
O3': (42.563,14.390,14.133)
C4: (34.136,11.667,11.954)
N3: (35.233,11.827,11.132)
OP1: (28.708,7.982,7.417)
OP2: (29.041,8.958,9.767)
C2: (35.254,11.768,9.758)
C1': (33.969,11.499,7.683)
C3': (33.368,9.353,6.876)
O5': (30.587,9.546,7.901)
O4': (32.609,11.543,7.258)
C5': (30.875,9.966,6.569)
P: (29.106,9.107,8.299)
C4': (32.327,10.371,6.433)
C2': (34.588,10.256,7.042)
O2': (35.074,10.673,5.789)
N1: (34.026,11.503,9.157)
O4: (34.232,11.975,13.146)
O2: (36.277,11.942,9.122)
C6: (32.906,11.278,9.919)
C5: (32.915,11.351,11.260)
O3': (33.583,8.374,5.854)
Image (generated by PyMOL):
PyMOL image
show in jmol