ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZX7:G9:H4

Extra

PDB:
ATOM 1 O3' G A 8 12.798 34.841 -9.604 1.00 22.97 O
ATOM 2 P U A 9 13.572 33.446 -9.527 1.00 24.77 P
ATOM 3 OP1 U A 9 13.514 32.872 -10.906 1.00 23.75 O
ATOM 4 OP2 U A 9 13.041 32.667 -8.381 1.00 23.03 O
ATOM 5 O5' U A 9 15.077 33.843 -9.178 1.00 25.37 O
ATOM 6 C5' U A 9 15.929 34.428 -10.155 1.00 25.33 C
ATOM 7 C4' U A 9 17.324 34.582 -9.600 1.00 23.06 C
ATOM 8 O4' U A 9 17.294 35.487 -8.468 1.00 24.41 O
ATOM 9 C3' U A 9 17.917 33.312 -9.021 1.00 23.62 C
ATOM 10 O3' U A 9 18.462 32.506 -10.052 1.00 23.70 O
ATOM 11 C2' U A 9 18.974 33.858 -8.066 1.00 22.89 C
ATOM 12 O2' U A 9 20.145 34.287 -8.720 1.00 20.56 O
ATOM 13 C1' U A 9 18.266 35.095 -7.512 1.00 21.67 C
ATOM 14 N1 U A 9 17.587 34.861 -6.232 1.00 21.23 N
ATOM 15 C2 U A 9 18.324 35.014 -5.066 1.00 21.65 C
ATOM 16 O2 U A 9 19.519 35.288 -5.064 1.00 20.69 O
ATOM 17 N3 U A 9 17.610 34.837 -3.902 1.00 22.76 N
ATOM 18 C4 U A 9 16.255 34.526 -3.793 1.00 21.00 C
ATOM 19 O4 U A 9 15.705 34.583 -2.693 1.00 17.07 O
ATOM 20 C5 U A 9 15.587 34.343 -5.045 1.00 21.49 C
ATOM 21 C6 U A 9 16.256 34.516 -6.191 1.00 23.00 C
ATOM 22 P C A 10 18.347 30.906 -9.951 1.00 25.90 P
ATOM 23 OP1 C A 10 18.537 30.384 -11.323 1.00 25.64 O
ATOM 24 OP2 C A 10 17.122 30.565 -9.190 1.00 26.57 O
ATOM 25 O5' C A 10 19.602 30.478 -9.069 1.00 22.80 O
TER

ATOM 1 O3' G B 3 24.937 36.158 4.614 1.00 21.45 O
ATOM 2 P U B 4 24.540 37.522 3.874 1.00 22.94 P
ATOM 3 OP1 U B 4 25.540 38.504 4.336 1.00 23.57 O
ATOM 4 OP2 U B 4 23.095 37.796 4.064 1.00 22.48 O
ATOM 5 O5' U B 4 24.744 37.214 2.323 1.00 23.58 O
ATOM 6 C5' U B 4 25.979 36.705 1.831 1.00 21.91 C
ATOM 7 C4' U B 4 25.900 36.474 0.334 1.00 21.90 C
ATOM 8 O4' U B 4 24.936 35.423 0.036 1.00 21.29 O
ATOM 9 C3' U B 4 25.422 37.650 -0.505 1.00 21.34 C
ATOM 10 O3' U B 4 26.488 38.566 -0.744 1.00 22.40 O
ATOM 11 C2' U B 4 24.984 36.955 -1.792 1.00 20.42 C
ATOM 12 O2' U B 4 26.095 36.613 -2.592 1.00 21.50 O
ATOM 13 C1' U B 4 24.378 35.655 -1.254 1.00 21.99 C
ATOM 14 N1 U B 4 22.912 35.681 -1.154 1.00 19.21 N
ATOM 15 C2 U B 4 22.190 35.462 -2.318 1.00 19.37 C
ATOM 16 O2 U B 4 22.712 35.251 -3.398 1.00 19.91 O
ATOM 17 N3 U B 4 20.832 35.494 -2.172 1.00 21.64 N
ATOM 18 C4 U B 4 20.127 35.721 -1.012 1.00 21.52 C
ATOM 19 O4 U B 4 18.896 35.765 -1.059 1.00 19.82 O
ATOM 20 C5 U B 4 20.943 35.936 0.151 1.00 21.41 C
ATOM 21 C6 U B 4 22.276 35.910 0.039 1.00 19.36 C
ATOM 22 P C B 5 26.186 40.148 -0.767 1.00 22.03 P
ATOM 23 OP1 C B 5 27.475 40.875 -0.665 1.00 24.56 O
ATOM 24 OP2 C B 5 25.125 40.406 0.238 1.00 23.21 O
ATOM 25 O5' C B 5 25.607 40.375 -2.229 1.00 20.93 O
TER

Atoms:
C4: (16.255,34.526,-3.793)
N3: (17.610,34.837,-3.902)
OP1: (13.514,32.872,-10.906)
OP2: (13.041,32.667,-8.381)
C2: (18.324,35.014,-5.066)
C1': (18.266,35.095,-7.512)
C3': (17.917,33.312,-9.021)
O5': (15.077,33.843,-9.178)
O4': (17.294,35.487,-8.468)
C5': (15.929,34.428,-10.155)
P: (13.572,33.446,-9.527)
C4': (17.324,34.582,-9.600)
C2': (18.974,33.858,-8.066)
O2': (20.145,34.287,-8.720)
N1: (17.587,34.861,-6.232)
O4: (15.705,34.583,-2.693)
O2: (19.519,35.288,-5.064)
C6: (16.256,34.516,-6.191)
C5: (15.587,34.343,-5.045)
O3': (18.462,32.506,-10.052)
C4: (20.127,35.721,-1.012)
N3: (20.832,35.494,-2.172)
OP1: (25.540,38.504,4.336)
OP2: (23.095,37.796,4.064)
C2: (22.190,35.462,-2.318)
C1': (24.378,35.655,-1.254)
C3': (25.422,37.650,-0.505)
O5': (24.744,37.214,2.323)
O4': (24.936,35.423,0.036)
C5': (25.979,36.705,1.831)
P: (24.540,37.522,3.874)
C4': (25.900,36.474,0.334)
C2': (24.984,36.955,-1.792)
O2': (26.095,36.613,-2.592)
N1: (22.912,35.681,-1.154)
O4: (18.896,35.765,-1.059)
O2: (22.712,35.251,-3.398)
C6: (22.276,35.910,0.039)
C5: (20.943,35.936,0.151)
O3': (26.488,38.566,-0.744)
Image (generated by PyMOL):
PyMOL image
show in jmol