Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02387:02451
Extra
PDB:
ATOM 1 O3' U A2386 70.968 137.845 119.221 1.00 44.27 O
ATOM 2 P U A2387 69.910 137.970 120.432 1.00 45.30 P
ATOM 3 OP1 U A2387 70.381 139.086 121.277 1.00 46.52 O
ATOM 4 OP2 U A2387 69.664 136.643 121.045 1.00 44.35 O
ATOM 5 O5' U A2387 68.569 138.462 119.739 1.00 43.75 O
ATOM 6 C5' U A2387 68.461 139.793 119.216 1.00 41.47 C
ATOM 7 C4' U A2387 67.217 139.899 118.392 1.00 39.24 C
ATOM 8 O4' U A2387 67.271 138.848 117.407 1.00 40.87 O
ATOM 9 C3' U A2387 65.944 139.627 119.165 1.00 38.61 C
ATOM 10 O3' U A2387 65.473 140.840 119.738 1.00 37.61 O
ATOM 11 C2' U A2387 65.006 139.088 118.094 1.00 39.59 C
ATOM 12 O2' U A2387 64.380 140.110 117.341 1.00 39.61 O
ATOM 13 C1' U A2387 65.982 138.328 117.193 1.00 40.14 C
ATOM 14 N1 U A2387 66.053 136.869 117.343 1.00 41.63 N
ATOM 15 C2 U A2387 65.212 136.093 116.556 1.00 43.57 C
ATOM 16 O2 U A2387 64.396 136.565 115.781 1.00 45.81 O
ATOM 17 N3 U A2387 65.362 134.742 116.708 1.00 42.64 N
ATOM 18 C4 U A2387 66.235 134.099 117.542 1.00 42.15 C
ATOM 19 O4 U A2387 66.279 132.875 117.529 1.00 42.46 O
ATOM 20 C5 U A2387 67.052 134.961 118.335 1.00 43.19 C
ATOM 21 C6 U A2387 66.934 136.286 118.213 1.00 42.13 C
ATOM 22 P C A2388 64.731 140.819 121.155 1.00 37.56 P
ATOM 23 OP1 C A2388 64.414 142.223 121.491 1.00 34.94 O
ATOM 24 OP2 C A2388 65.550 140.006 122.093 1.00 39.51 O
ATOM 25 O5' C A2388 63.373 140.042 120.860 1.00 37.73 O
TER
ATOM 1 O3' G B2450 61.166 126.264 112.486 1.00 34.69 O
ATOM 2 P U B2451 62.233 126.828 111.444 1.00 35.77 P
ATOM 3 OP1 U B2451 61.754 126.498 110.083 1.00 38.00 O
ATOM 4 OP2 U B2451 63.567 126.357 111.882 1.00 35.87 O
ATOM 5 O5' U B2451 62.165 128.406 111.653 1.00 36.26 O
ATOM 6 C5' U B2451 60.982 129.169 111.311 1.00 36.47 C
ATOM 7 C4' U B2451 61.165 130.613 111.718 1.00 36.78 C
ATOM 8 O4' U B2451 61.327 130.668 113.154 1.00 39.36 O
ATOM 9 C3' U B2451 62.413 131.288 111.168 1.00 36.28 C
ATOM 10 O3' U B2451 62.138 131.902 109.924 1.00 35.61 O
ATOM 11 C2' U B2451 62.693 132.365 112.201 1.00 37.26 C
ATOM 12 O2' U B2451 61.879 133.504 112.010 1.00 35.85 O
ATOM 13 C1' U B2451 62.284 131.661 113.494 1.00 38.82 C
ATOM 14 N1 U B2451 63.392 131.014 114.215 1.00 39.56 N
ATOM 15 C2 U B2451 63.977 131.707 115.256 1.00 38.82 C
ATOM 16 O2 U B2451 63.631 132.823 115.585 1.00 39.02 O
ATOM 17 N3 U B2451 64.984 131.039 115.901 1.00 39.75 N
ATOM 18 C4 U B2451 65.457 129.772 115.618 1.00 41.08 C
ATOM 19 O4 U B2451 66.363 129.293 116.301 1.00 40.01 O
ATOM 20 C5 U B2451 64.806 129.126 114.523 1.00 41.11 C
ATOM 21 C6 U B2451 63.824 129.753 113.875 1.00 40.78 C
ATOM 22 P G B2452 62.697 131.264 108.572 1.00 34.56 P
ATOM 23 OP1 G B2452 61.622 131.502 107.584 1.00 37.09 O
ATOM 24 OP2 G B2452 63.188 129.893 108.807 1.00 34.60 O
ATOM 25 O5' G B2452 63.943 132.173 108.186 1.00 34.69 O
TER
ATOM 2 P U A2387 69.910 137.970 120.432 1.00 45.30 P
ATOM 3 OP1 U A2387 70.381 139.086 121.277 1.00 46.52 O
ATOM 4 OP2 U A2387 69.664 136.643 121.045 1.00 44.35 O
ATOM 5 O5' U A2387 68.569 138.462 119.739 1.00 43.75 O
ATOM 6 C5' U A2387 68.461 139.793 119.216 1.00 41.47 C
ATOM 7 C4' U A2387 67.217 139.899 118.392 1.00 39.24 C
ATOM 8 O4' U A2387 67.271 138.848 117.407 1.00 40.87 O
ATOM 9 C3' U A2387 65.944 139.627 119.165 1.00 38.61 C
ATOM 10 O3' U A2387 65.473 140.840 119.738 1.00 37.61 O
ATOM 11 C2' U A2387 65.006 139.088 118.094 1.00 39.59 C
ATOM 12 O2' U A2387 64.380 140.110 117.341 1.00 39.61 O
ATOM 13 C1' U A2387 65.982 138.328 117.193 1.00 40.14 C
ATOM 14 N1 U A2387 66.053 136.869 117.343 1.00 41.63 N
ATOM 15 C2 U A2387 65.212 136.093 116.556 1.00 43.57 C
ATOM 16 O2 U A2387 64.396 136.565 115.781 1.00 45.81 O
ATOM 17 N3 U A2387 65.362 134.742 116.708 1.00 42.64 N
ATOM 18 C4 U A2387 66.235 134.099 117.542 1.00 42.15 C
ATOM 19 O4 U A2387 66.279 132.875 117.529 1.00 42.46 O
ATOM 20 C5 U A2387 67.052 134.961 118.335 1.00 43.19 C
ATOM 21 C6 U A2387 66.934 136.286 118.213 1.00 42.13 C
ATOM 22 P C A2388 64.731 140.819 121.155 1.00 37.56 P
ATOM 23 OP1 C A2388 64.414 142.223 121.491 1.00 34.94 O
ATOM 24 OP2 C A2388 65.550 140.006 122.093 1.00 39.51 O
ATOM 25 O5' C A2388 63.373 140.042 120.860 1.00 37.73 O
TER
ATOM 1 O3' G B2450 61.166 126.264 112.486 1.00 34.69 O
ATOM 2 P U B2451 62.233 126.828 111.444 1.00 35.77 P
ATOM 3 OP1 U B2451 61.754 126.498 110.083 1.00 38.00 O
ATOM 4 OP2 U B2451 63.567 126.357 111.882 1.00 35.87 O
ATOM 5 O5' U B2451 62.165 128.406 111.653 1.00 36.26 O
ATOM 6 C5' U B2451 60.982 129.169 111.311 1.00 36.47 C
ATOM 7 C4' U B2451 61.165 130.613 111.718 1.00 36.78 C
ATOM 8 O4' U B2451 61.327 130.668 113.154 1.00 39.36 O
ATOM 9 C3' U B2451 62.413 131.288 111.168 1.00 36.28 C
ATOM 10 O3' U B2451 62.138 131.902 109.924 1.00 35.61 O
ATOM 11 C2' U B2451 62.693 132.365 112.201 1.00 37.26 C
ATOM 12 O2' U B2451 61.879 133.504 112.010 1.00 35.85 O
ATOM 13 C1' U B2451 62.284 131.661 113.494 1.00 38.82 C
ATOM 14 N1 U B2451 63.392 131.014 114.215 1.00 39.56 N
ATOM 15 C2 U B2451 63.977 131.707 115.256 1.00 38.82 C
ATOM 16 O2 U B2451 63.631 132.823 115.585 1.00 39.02 O
ATOM 17 N3 U B2451 64.984 131.039 115.901 1.00 39.75 N
ATOM 18 C4 U B2451 65.457 129.772 115.618 1.00 41.08 C
ATOM 19 O4 U B2451 66.363 129.293 116.301 1.00 40.01 O
ATOM 20 C5 U B2451 64.806 129.126 114.523 1.00 41.11 C
ATOM 21 C6 U B2451 63.824 129.753 113.875 1.00 40.78 C
ATOM 22 P G B2452 62.697 131.264 108.572 1.00 34.56 P
ATOM 23 OP1 G B2452 61.622 131.502 107.584 1.00 37.09 O
ATOM 24 OP2 G B2452 63.188 129.893 108.807 1.00 34.60 O
ATOM 25 O5' G B2452 63.943 132.173 108.186 1.00 34.69 O
TER
Atoms:
C4: (66.235,134.099,117.542)
N3: (65.362,134.742,116.708)
OP1: (70.381,139.086,121.277)
OP2: (69.664,136.643,121.045)
C2: (65.212,136.093,116.556)
C1': (65.982,138.328,117.193)
C3': (65.944,139.627,119.165)
O5': (68.569,138.462,119.739)
O4': (67.271,138.848,117.407)
C5': (68.461,139.793,119.216)
P: (69.910,137.970,120.432)
C4': (67.217,139.899,118.392)
C2': (65.006,139.088,118.094)
O2': (64.380,140.110,117.341)
N1: (66.053,136.869,117.343)
O4: (66.279,132.875,117.529)
O2: (64.396,136.565,115.781)
C6: (66.934,136.286,118.213)
C5: (67.052,134.961,118.335)
O3': (65.473,140.840,119.738)
N3: (65.362,134.742,116.708)
OP1: (70.381,139.086,121.277)
OP2: (69.664,136.643,121.045)
C2: (65.212,136.093,116.556)
C1': (65.982,138.328,117.193)
C3': (65.944,139.627,119.165)
O5': (68.569,138.462,119.739)
O4': (67.271,138.848,117.407)
C5': (68.461,139.793,119.216)
P: (69.910,137.970,120.432)
C4': (67.217,139.899,118.392)
C2': (65.006,139.088,118.094)
O2': (64.380,140.110,117.341)
N1: (66.053,136.869,117.343)
O4: (66.279,132.875,117.529)
O2: (64.396,136.565,115.781)
C6: (66.934,136.286,118.213)
C5: (67.052,134.961,118.335)
O3': (65.473,140.840,119.738)
C4: (65.457,129.772,115.618)
N3: (64.984,131.039,115.901)
OP1: (61.754,126.498,110.083)
OP2: (63.567,126.357,111.882)
C2: (63.977,131.707,115.256)
C1': (62.284,131.661,113.494)
C3': (62.413,131.288,111.168)
O5': (62.165,128.406,111.653)
O4': (61.327,130.668,113.154)
C5': (60.982,129.169,111.311)
P: (62.233,126.828,111.444)
C4': (61.165,130.613,111.718)
C2': (62.693,132.365,112.201)
O2': (61.879,133.504,112.010)
N1: (63.392,131.014,114.215)
O4: (66.363,129.293,116.301)
O2: (63.631,132.823,115.585)
C6: (63.824,129.753,113.875)
C5: (64.806,129.126,114.523)
O3': (62.138,131.902,109.924)
N3: (64.984,131.039,115.901)
OP1: (61.754,126.498,110.083)
OP2: (63.567,126.357,111.882)
C2: (63.977,131.707,115.256)
C1': (62.284,131.661,113.494)
C3': (62.413,131.288,111.168)
O5': (62.165,128.406,111.653)
O4': (61.327,130.668,113.154)
C5': (60.982,129.169,111.311)
P: (62.233,126.828,111.444)
C4': (61.165,130.613,111.718)
C2': (62.693,132.365,112.201)
O2': (61.879,133.504,112.010)
N1: (63.392,131.014,114.215)
O4: (66.363,129.293,116.301)
O2: (63.631,132.823,115.585)
C6: (63.824,129.753,113.875)
C5: (64.806,129.126,114.523)
O3': (62.138,131.902,109.924)
Image (generated by PyMOL):