Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNQ:A19:B5
Extra
PDB:
ATOM 1 O3' G A 18 3.472 -0.988 11.366 1.00 37.86 O
ATOM 2 P U A 19 2.984 -2.112 12.405 1.00 39.03 P
ATOM 3 OP1 U A 19 4.200 -2.750 12.961 1.00 42.13 O
ATOM 4 OP2 U A 19 1.937 -2.949 11.778 1.00 37.45 O
ATOM 5 O5' U A 19 2.269 -1.283 13.563 1.00 40.06 O
ATOM 6 C5' U A 19 2.980 -0.328 14.350 1.00 35.55 C
ATOM 7 C4' U A 19 2.027 0.359 15.304 1.00 34.68 C
ATOM 8 O4' U A 19 1.201 1.334 14.601 1.00 30.34 O
ATOM 9 C3' U A 19 1.025 -0.563 15.984 1.00 31.66 C
ATOM 10 O3' U A 19 1.600 -1.185 17.126 1.00 34.72 O
ATOM 11 C2' U A 19 -0.082 0.412 16.356 1.00 34.14 C
ATOM 12 O2' U A 19 0.244 1.210 17.476 1.00 24.91 O
ATOM 13 C1' U A 19 -0.124 1.293 15.107 1.00 30.16 C
ATOM 14 N1 U A 19 -1.023 0.802 14.049 1.00 33.04 N
ATOM 15 C2 U A 19 -2.361 1.163 14.123 1.00 32.57 C
ATOM 16 O2 U A 19 -2.815 1.850 15.015 1.00 31.19 O
ATOM 17 N3 U A 19 -3.147 0.695 13.102 1.00 32.73 N
ATOM 18 C4 U A 19 -2.750 -0.080 12.028 1.00 32.49 C
ATOM 19 O4 U A 19 -3.572 -0.350 11.140 1.00 27.24 O
ATOM 20 C5 U A 19 -1.360 -0.422 12.024 1.00 30.81 C
ATOM 21 C6 U A 19 -0.560 0.020 13.011 1.00 31.37 C
ATOM 22 P C A 20 1.301 -2.734 17.426 1.00 33.70 P
ATOM 23 OP1 C A 20 2.420 -3.194 18.274 1.00 34.56 O
ATOM 24 OP2 C A 20 1.005 -3.456 16.159 1.00 38.04 O
ATOM 25 O5' C A 20 -0.036 -2.692 18.294 1.00 34.25 O
TER
ATOM 1 O3' G B 4 -13.281 4.414 13.587 1.00 33.90 O
ATOM 2 P U B 5 -12.173 5.581 13.699 1.00 35.54 P
ATOM 3 OP1 U B 5 -12.906 6.804 14.097 1.00 37.62 O
ATOM 4 OP2 U B 5 -11.341 5.588 12.476 1.00 33.30 O
ATOM 5 O5' U B 5 -11.274 5.131 14.933 1.00 33.70 O
ATOM 6 C5' U B 5 -11.803 5.162 16.255 1.00 33.96 C
ATOM 7 C4' U B 5 -10.707 4.936 17.265 1.00 31.94 C
ATOM 8 O4' U B 5 -10.120 3.626 17.057 1.00 31.17 O
ATOM 9 C3' U B 5 -9.529 5.898 17.188 1.00 30.74 C
ATOM 10 O3' U B 5 -9.819 7.085 17.930 1.00 31.59 O
ATOM 11 C2' U B 5 -8.426 5.095 17.867 1.00 30.55 C
ATOM 12 O2' U B 5 -8.506 5.138 19.274 1.00 30.09 O
ATOM 13 C1' U B 5 -8.743 3.673 17.401 1.00 31.66 C
ATOM 14 N1 U B 5 -7.939 3.243 16.248 1.00 29.09 N
ATOM 15 C2 U B 5 -6.612 2.919 16.487 1.00 27.40 C
ATOM 16 O2 U B 5 -6.093 3.028 17.584 1.00 33.80 O
ATOM 17 N3 U B 5 -5.917 2.469 15.396 1.00 25.30 N
ATOM 18 C4 U B 5 -6.399 2.320 14.108 1.00 27.42 C
ATOM 19 O4 U B 5 -5.663 1.843 13.238 1.00 23.69 O
ATOM 20 C5 U B 5 -7.768 2.709 13.935 1.00 22.84 C
ATOM 21 C6 U B 5 -8.473 3.149 14.986 1.00 26.53 C
ATOM 22 P C B 6 -9.336 8.517 17.375 1.00 33.83 P
ATOM 23 OP1 C B 6 -9.844 9.523 18.339 1.00 31.90 O
ATOM 24 OP2 C B 6 -9.662 8.643 15.932 1.00 30.69 O
ATOM 25 O5' C B 6 -7.749 8.462 17.493 1.00 28.22 O
TER
ATOM 2 P U A 19 2.984 -2.112 12.405 1.00 39.03 P
ATOM 3 OP1 U A 19 4.200 -2.750 12.961 1.00 42.13 O
ATOM 4 OP2 U A 19 1.937 -2.949 11.778 1.00 37.45 O
ATOM 5 O5' U A 19 2.269 -1.283 13.563 1.00 40.06 O
ATOM 6 C5' U A 19 2.980 -0.328 14.350 1.00 35.55 C
ATOM 7 C4' U A 19 2.027 0.359 15.304 1.00 34.68 C
ATOM 8 O4' U A 19 1.201 1.334 14.601 1.00 30.34 O
ATOM 9 C3' U A 19 1.025 -0.563 15.984 1.00 31.66 C
ATOM 10 O3' U A 19 1.600 -1.185 17.126 1.00 34.72 O
ATOM 11 C2' U A 19 -0.082 0.412 16.356 1.00 34.14 C
ATOM 12 O2' U A 19 0.244 1.210 17.476 1.00 24.91 O
ATOM 13 C1' U A 19 -0.124 1.293 15.107 1.00 30.16 C
ATOM 14 N1 U A 19 -1.023 0.802 14.049 1.00 33.04 N
ATOM 15 C2 U A 19 -2.361 1.163 14.123 1.00 32.57 C
ATOM 16 O2 U A 19 -2.815 1.850 15.015 1.00 31.19 O
ATOM 17 N3 U A 19 -3.147 0.695 13.102 1.00 32.73 N
ATOM 18 C4 U A 19 -2.750 -0.080 12.028 1.00 32.49 C
ATOM 19 O4 U A 19 -3.572 -0.350 11.140 1.00 27.24 O
ATOM 20 C5 U A 19 -1.360 -0.422 12.024 1.00 30.81 C
ATOM 21 C6 U A 19 -0.560 0.020 13.011 1.00 31.37 C
ATOM 22 P C A 20 1.301 -2.734 17.426 1.00 33.70 P
ATOM 23 OP1 C A 20 2.420 -3.194 18.274 1.00 34.56 O
ATOM 24 OP2 C A 20 1.005 -3.456 16.159 1.00 38.04 O
ATOM 25 O5' C A 20 -0.036 -2.692 18.294 1.00 34.25 O
TER
ATOM 1 O3' G B 4 -13.281 4.414 13.587 1.00 33.90 O
ATOM 2 P U B 5 -12.173 5.581 13.699 1.00 35.54 P
ATOM 3 OP1 U B 5 -12.906 6.804 14.097 1.00 37.62 O
ATOM 4 OP2 U B 5 -11.341 5.588 12.476 1.00 33.30 O
ATOM 5 O5' U B 5 -11.274 5.131 14.933 1.00 33.70 O
ATOM 6 C5' U B 5 -11.803 5.162 16.255 1.00 33.96 C
ATOM 7 C4' U B 5 -10.707 4.936 17.265 1.00 31.94 C
ATOM 8 O4' U B 5 -10.120 3.626 17.057 1.00 31.17 O
ATOM 9 C3' U B 5 -9.529 5.898 17.188 1.00 30.74 C
ATOM 10 O3' U B 5 -9.819 7.085 17.930 1.00 31.59 O
ATOM 11 C2' U B 5 -8.426 5.095 17.867 1.00 30.55 C
ATOM 12 O2' U B 5 -8.506 5.138 19.274 1.00 30.09 O
ATOM 13 C1' U B 5 -8.743 3.673 17.401 1.00 31.66 C
ATOM 14 N1 U B 5 -7.939 3.243 16.248 1.00 29.09 N
ATOM 15 C2 U B 5 -6.612 2.919 16.487 1.00 27.40 C
ATOM 16 O2 U B 5 -6.093 3.028 17.584 1.00 33.80 O
ATOM 17 N3 U B 5 -5.917 2.469 15.396 1.00 25.30 N
ATOM 18 C4 U B 5 -6.399 2.320 14.108 1.00 27.42 C
ATOM 19 O4 U B 5 -5.663 1.843 13.238 1.00 23.69 O
ATOM 20 C5 U B 5 -7.768 2.709 13.935 1.00 22.84 C
ATOM 21 C6 U B 5 -8.473 3.149 14.986 1.00 26.53 C
ATOM 22 P C B 6 -9.336 8.517 17.375 1.00 33.83 P
ATOM 23 OP1 C B 6 -9.844 9.523 18.339 1.00 31.90 O
ATOM 24 OP2 C B 6 -9.662 8.643 15.932 1.00 30.69 O
ATOM 25 O5' C B 6 -7.749 8.462 17.493 1.00 28.22 O
TER
Atoms:
C4: (-2.750,-0.080,12.028)
N3: (-3.147,0.695,13.102)
OP1: (4.200,-2.750,12.961)
OP2: (1.937,-2.949,11.778)
C2: (-2.361,1.163,14.123)
C1': (-0.124,1.293,15.107)
C3': (1.025,-0.563,15.984)
O5': (2.269,-1.283,13.563)
O4': (1.201,1.334,14.601)
C5': (2.980,-0.328,14.350)
P: (2.984,-2.112,12.405)
C4': (2.027,0.359,15.304)
C2': (-0.082,0.412,16.356)
O2': (0.244,1.210,17.476)
N1: (-1.023,0.802,14.049)
O4: (-3.572,-0.350,11.140)
O2: (-2.815,1.850,15.015)
C6: (-0.560,0.020,13.011)
C5: (-1.360,-0.422,12.024)
O3': (1.600,-1.185,17.126)
N3: (-3.147,0.695,13.102)
OP1: (4.200,-2.750,12.961)
OP2: (1.937,-2.949,11.778)
C2: (-2.361,1.163,14.123)
C1': (-0.124,1.293,15.107)
C3': (1.025,-0.563,15.984)
O5': (2.269,-1.283,13.563)
O4': (1.201,1.334,14.601)
C5': (2.980,-0.328,14.350)
P: (2.984,-2.112,12.405)
C4': (2.027,0.359,15.304)
C2': (-0.082,0.412,16.356)
O2': (0.244,1.210,17.476)
N1: (-1.023,0.802,14.049)
O4: (-3.572,-0.350,11.140)
O2: (-2.815,1.850,15.015)
C6: (-0.560,0.020,13.011)
C5: (-1.360,-0.422,12.024)
O3': (1.600,-1.185,17.126)
C4: (-6.399,2.320,14.108)
N3: (-5.917,2.469,15.396)
OP1: (-12.906,6.804,14.097)
OP2: (-11.341,5.588,12.476)
C2: (-6.612,2.919,16.487)
C1': (-8.743,3.673,17.401)
C3': (-9.529,5.898,17.188)
O5': (-11.274,5.131,14.933)
O4': (-10.120,3.626,17.057)
C5': (-11.803,5.162,16.255)
P: (-12.173,5.581,13.699)
C4': (-10.707,4.936,17.265)
C2': (-8.426,5.095,17.867)
O2': (-8.506,5.138,19.274)
N1: (-7.939,3.243,16.248)
O4: (-5.663,1.843,13.238)
O2: (-6.093,3.028,17.584)
C6: (-8.473,3.149,14.986)
C5: (-7.768,2.709,13.935)
O3': (-9.819,7.085,17.930)
N3: (-5.917,2.469,15.396)
OP1: (-12.906,6.804,14.097)
OP2: (-11.341,5.588,12.476)
C2: (-6.612,2.919,16.487)
C1': (-8.743,3.673,17.401)
C3': (-9.529,5.898,17.188)
O5': (-11.274,5.131,14.933)
O4': (-10.120,3.626,17.057)
C5': (-11.803,5.162,16.255)
P: (-12.173,5.581,13.699)
C4': (-10.707,4.936,17.265)
C2': (-8.426,5.095,17.867)
O2': (-8.506,5.138,19.274)
N1: (-7.939,3.243,16.248)
O4: (-5.663,1.843,13.238)
O2: (-6.093,3.028,17.584)
C6: (-8.473,3.149,14.986)
C5: (-7.768,2.709,13.935)
O3': (-9.819,7.085,17.930)
Image (generated by PyMOL):