Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01263:01309
Extra
PDB:
ATOM 1 O3' C A1262 25.931 122.224 60.258 1.00 34.73 O
ATOM 2 P U A1263 25.410 122.206 58.746 1.00 34.61 P
ATOM 3 OP1 U A1263 24.827 123.549 58.517 1.00 37.64 O
ATOM 4 OP2 U A1263 24.596 120.995 58.507 1.00 32.26 O
ATOM 5 O5' U A1263 26.737 122.042 57.885 1.00 34.60 O
ATOM 6 C5' U A1263 27.736 123.081 57.845 1.00 29.13 C
ATOM 7 C4' U A1263 28.805 122.716 56.851 1.00 28.93 C
ATOM 8 O4' U A1263 29.408 121.464 57.260 1.00 28.22 O
ATOM 9 C3' U A1263 28.300 122.460 55.438 1.00 29.24 C
ATOM 10 O3' U A1263 28.241 123.686 54.715 1.00 32.69 O
ATOM 11 C2' U A1263 29.355 121.518 54.879 1.00 29.28 C
ATOM 12 O2' U A1263 30.523 122.196 54.474 1.00 31.32 O
ATOM 13 C1' U A1263 29.705 120.685 56.114 1.00 29.09 C
ATOM 14 N1 U A1263 29.011 119.392 56.230 1.00 27.80 N
ATOM 15 C2 U A1263 29.412 118.368 55.397 1.00 29.09 C
ATOM 16 O2 U A1263 30.247 118.511 54.523 1.00 32.52 O
ATOM 17 N3 U A1263 28.790 117.167 55.617 1.00 29.82 N
ATOM 18 C4 U A1263 27.817 116.899 56.551 1.00 29.69 C
ATOM 19 O4 U A1263 27.413 115.749 56.683 1.00 33.94 O
ATOM 20 C5 U A1263 27.424 118.016 57.340 1.00 29.40 C
ATOM 21 C6 U A1263 28.017 119.195 57.158 1.00 28.96 C
ATOM 22 P C A1264 26.926 124.067 53.877 1.00 31.42 P
ATOM 23 OP1 C A1264 26.988 125.513 53.577 1.00 29.79 O
ATOM 24 OP2 C A1264 25.744 123.533 54.600 1.00 34.85 O
ATOM 25 O5' C A1264 27.131 123.267 52.516 1.00 29.72 O
TER
ATOM 1 O3' G B1308 29.792 107.976 50.284 1.00 32.49 O
ATOM 2 P U B1309 31.027 108.148 51.298 1.00 33.43 P
ATOM 3 OP1 U B1309 32.162 107.381 50.714 1.00 30.52 O
ATOM 4 OP2 U B1309 30.570 107.846 52.682 1.00 31.98 O
ATOM 5 O5' U B1309 31.354 109.706 51.238 1.00 33.05 O
ATOM 6 C5' U B1309 31.808 110.326 50.023 1.00 35.68 C
ATOM 7 C4' U B1309 32.033 111.797 50.252 1.00 39.39 C
ATOM 8 O4' U B1309 30.773 112.454 50.564 1.00 39.30 O
ATOM 9 C3' U B1309 32.921 112.108 51.442 1.00 42.08 C
ATOM 10 O3' U B1309 34.294 111.985 51.077 1.00 42.79 O
ATOM 11 C2' U B1309 32.493 113.529 51.792 1.00 41.42 C
ATOM 12 O2' U B1309 33.037 114.465 50.886 1.00 42.66 O
ATOM 13 C1' U B1309 30.983 113.460 51.545 1.00 40.27 C
ATOM 14 N1 U B1309 30.173 113.122 52.729 1.00 41.91 N
ATOM 15 C2 U B1309 29.763 114.153 53.578 1.00 43.09 C
ATOM 16 O2 U B1309 30.053 115.316 53.403 1.00 45.41 O
ATOM 17 N3 U B1309 28.991 113.761 54.644 1.00 43.14 N
ATOM 18 C4 U B1309 28.588 112.471 54.951 1.00 45.44 C
ATOM 19 O4 U B1309 27.866 112.275 55.934 1.00 45.28 O
ATOM 20 C5 U B1309 29.054 111.467 54.039 1.00 45.23 C
ATOM 21 C6 U B1309 29.812 111.817 52.989 1.00 43.82 C
ATOM 22 P G B1310 35.342 111.285 52.088 1.00 47.64 P
ATOM 23 OP1 G B1310 36.509 110.889 51.278 1.00 46.30 O
ATOM 24 OP2 G B1310 34.662 110.269 52.937 1.00 44.88 O
ATOM 25 O5' G B1310 35.797 112.480 53.033 1.00 44.96 O
TER
ATOM 2 P U A1263 25.410 122.206 58.746 1.00 34.61 P
ATOM 3 OP1 U A1263 24.827 123.549 58.517 1.00 37.64 O
ATOM 4 OP2 U A1263 24.596 120.995 58.507 1.00 32.26 O
ATOM 5 O5' U A1263 26.737 122.042 57.885 1.00 34.60 O
ATOM 6 C5' U A1263 27.736 123.081 57.845 1.00 29.13 C
ATOM 7 C4' U A1263 28.805 122.716 56.851 1.00 28.93 C
ATOM 8 O4' U A1263 29.408 121.464 57.260 1.00 28.22 O
ATOM 9 C3' U A1263 28.300 122.460 55.438 1.00 29.24 C
ATOM 10 O3' U A1263 28.241 123.686 54.715 1.00 32.69 O
ATOM 11 C2' U A1263 29.355 121.518 54.879 1.00 29.28 C
ATOM 12 O2' U A1263 30.523 122.196 54.474 1.00 31.32 O
ATOM 13 C1' U A1263 29.705 120.685 56.114 1.00 29.09 C
ATOM 14 N1 U A1263 29.011 119.392 56.230 1.00 27.80 N
ATOM 15 C2 U A1263 29.412 118.368 55.397 1.00 29.09 C
ATOM 16 O2 U A1263 30.247 118.511 54.523 1.00 32.52 O
ATOM 17 N3 U A1263 28.790 117.167 55.617 1.00 29.82 N
ATOM 18 C4 U A1263 27.817 116.899 56.551 1.00 29.69 C
ATOM 19 O4 U A1263 27.413 115.749 56.683 1.00 33.94 O
ATOM 20 C5 U A1263 27.424 118.016 57.340 1.00 29.40 C
ATOM 21 C6 U A1263 28.017 119.195 57.158 1.00 28.96 C
ATOM 22 P C A1264 26.926 124.067 53.877 1.00 31.42 P
ATOM 23 OP1 C A1264 26.988 125.513 53.577 1.00 29.79 O
ATOM 24 OP2 C A1264 25.744 123.533 54.600 1.00 34.85 O
ATOM 25 O5' C A1264 27.131 123.267 52.516 1.00 29.72 O
TER
ATOM 1 O3' G B1308 29.792 107.976 50.284 1.00 32.49 O
ATOM 2 P U B1309 31.027 108.148 51.298 1.00 33.43 P
ATOM 3 OP1 U B1309 32.162 107.381 50.714 1.00 30.52 O
ATOM 4 OP2 U B1309 30.570 107.846 52.682 1.00 31.98 O
ATOM 5 O5' U B1309 31.354 109.706 51.238 1.00 33.05 O
ATOM 6 C5' U B1309 31.808 110.326 50.023 1.00 35.68 C
ATOM 7 C4' U B1309 32.033 111.797 50.252 1.00 39.39 C
ATOM 8 O4' U B1309 30.773 112.454 50.564 1.00 39.30 O
ATOM 9 C3' U B1309 32.921 112.108 51.442 1.00 42.08 C
ATOM 10 O3' U B1309 34.294 111.985 51.077 1.00 42.79 O
ATOM 11 C2' U B1309 32.493 113.529 51.792 1.00 41.42 C
ATOM 12 O2' U B1309 33.037 114.465 50.886 1.00 42.66 O
ATOM 13 C1' U B1309 30.983 113.460 51.545 1.00 40.27 C
ATOM 14 N1 U B1309 30.173 113.122 52.729 1.00 41.91 N
ATOM 15 C2 U B1309 29.763 114.153 53.578 1.00 43.09 C
ATOM 16 O2 U B1309 30.053 115.316 53.403 1.00 45.41 O
ATOM 17 N3 U B1309 28.991 113.761 54.644 1.00 43.14 N
ATOM 18 C4 U B1309 28.588 112.471 54.951 1.00 45.44 C
ATOM 19 O4 U B1309 27.866 112.275 55.934 1.00 45.28 O
ATOM 20 C5 U B1309 29.054 111.467 54.039 1.00 45.23 C
ATOM 21 C6 U B1309 29.812 111.817 52.989 1.00 43.82 C
ATOM 22 P G B1310 35.342 111.285 52.088 1.00 47.64 P
ATOM 23 OP1 G B1310 36.509 110.889 51.278 1.00 46.30 O
ATOM 24 OP2 G B1310 34.662 110.269 52.937 1.00 44.88 O
ATOM 25 O5' G B1310 35.797 112.480 53.033 1.00 44.96 O
TER
Atoms:
C4: (27.817,116.899,56.551)
N3: (28.790,117.167,55.617)
OP1: (24.827,123.549,58.517)
OP2: (24.596,120.995,58.507)
C2: (29.412,118.368,55.397)
C1': (29.705,120.685,56.114)
C3': (28.300,122.460,55.438)
O5': (26.737,122.042,57.885)
O4': (29.408,121.464,57.260)
C5': (27.736,123.081,57.845)
P: (25.410,122.206,58.746)
C4': (28.805,122.716,56.851)
C2': (29.355,121.518,54.879)
O2': (30.523,122.196,54.474)
N1: (29.011,119.392,56.230)
O4: (27.413,115.749,56.683)
O2: (30.247,118.511,54.523)
C6: (28.017,119.195,57.158)
C5: (27.424,118.016,57.340)
O3': (28.241,123.686,54.715)
N3: (28.790,117.167,55.617)
OP1: (24.827,123.549,58.517)
OP2: (24.596,120.995,58.507)
C2: (29.412,118.368,55.397)
C1': (29.705,120.685,56.114)
C3': (28.300,122.460,55.438)
O5': (26.737,122.042,57.885)
O4': (29.408,121.464,57.260)
C5': (27.736,123.081,57.845)
P: (25.410,122.206,58.746)
C4': (28.805,122.716,56.851)
C2': (29.355,121.518,54.879)
O2': (30.523,122.196,54.474)
N1: (29.011,119.392,56.230)
O4: (27.413,115.749,56.683)
O2: (30.247,118.511,54.523)
C6: (28.017,119.195,57.158)
C5: (27.424,118.016,57.340)
O3': (28.241,123.686,54.715)
C4: (28.588,112.471,54.951)
N3: (28.991,113.761,54.644)
OP1: (32.162,107.381,50.714)
OP2: (30.570,107.846,52.682)
C2: (29.763,114.153,53.578)
C1': (30.983,113.460,51.545)
C3': (32.921,112.108,51.442)
O5': (31.354,109.706,51.238)
O4': (30.773,112.454,50.564)
C5': (31.808,110.326,50.023)
P: (31.027,108.148,51.298)
C4': (32.033,111.797,50.252)
C2': (32.493,113.529,51.792)
O2': (33.037,114.465,50.886)
N1: (30.173,113.122,52.729)
O4: (27.866,112.275,55.934)
O2: (30.053,115.316,53.403)
C6: (29.812,111.817,52.989)
C5: (29.054,111.467,54.039)
O3': (34.294,111.985,51.077)
N3: (28.991,113.761,54.644)
OP1: (32.162,107.381,50.714)
OP2: (30.570,107.846,52.682)
C2: (29.763,114.153,53.578)
C1': (30.983,113.460,51.545)
C3': (32.921,112.108,51.442)
O5': (31.354,109.706,51.238)
O4': (30.773,112.454,50.564)
C5': (31.808,110.326,50.023)
P: (31.027,108.148,51.298)
C4': (32.033,111.797,50.252)
C2': (32.493,113.529,51.792)
O2': (33.037,114.465,50.886)
N1: (30.173,113.122,52.729)
O4: (27.866,112.275,55.934)
O2: (30.053,115.316,53.403)
C6: (29.812,111.817,52.989)
C5: (29.054,111.467,54.039)
O3': (34.294,111.985,51.077)
Image (generated by PyMOL):