Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01263:01309
Extra
PDB:
ATOM 1 O3' C A1262 26.024 122.148 60.143 1.00 41.62 O
ATOM 2 P U A1263 25.513 122.112 58.626 1.00 43.29 P
ATOM 3 OP1 U A1263 24.902 123.439 58.360 1.00 44.26 O
ATOM 4 OP2 U A1263 24.723 120.877 58.396 1.00 41.01 O
ATOM 5 O5' U A1263 26.848 121.960 57.781 1.00 40.65 O
ATOM 6 C5' U A1263 27.823 123.012 57.731 1.00 38.30 C
ATOM 7 C4' U A1263 28.903 122.648 56.750 1.00 36.76 C
ATOM 8 O4' U A1263 29.482 121.387 57.162 1.00 35.34 O
ATOM 9 C3' U A1263 28.403 122.389 55.340 1.00 35.77 C
ATOM 10 O3' U A1263 28.340 123.613 54.619 1.00 36.59 O
ATOM 11 C2' U A1263 29.454 121.441 54.787 1.00 34.83 C
ATOM 12 O2' U A1263 30.624 122.122 54.391 1.00 34.46 O
ATOM 13 C1' U A1263 29.787 120.606 56.024 1.00 35.28 C
ATOM 14 N1 U A1263 29.109 119.307 56.156 1.00 35.87 N
ATOM 15 C2 U A1263 29.475 118.284 55.292 1.00 37.54 C
ATOM 16 O2 U A1263 30.297 118.424 54.403 1.00 39.41 O
ATOM 17 N3 U A1263 28.843 117.087 55.511 1.00 37.99 N
ATOM 18 C4 U A1263 27.902 116.815 56.477 1.00 38.67 C
ATOM 19 O4 U A1263 27.439 115.679 56.568 1.00 40.36 O
ATOM 20 C5 U A1263 27.565 117.923 57.313 1.00 37.90 C
ATOM 21 C6 U A1263 28.160 119.100 57.126 1.00 35.97 C
ATOM 22 P C A1264 27.004 124.011 53.825 1.00 36.17 P
ATOM 23 OP1 C A1264 27.017 125.486 53.659 1.00 33.96 O
ATOM 24 OP2 C A1264 25.848 123.362 54.495 1.00 36.58 O
ATOM 25 O5' C A1264 27.198 123.324 52.402 1.00 32.67 O
TER
ATOM 1 O3' G B1308 29.820 107.989 50.168 1.00 39.76 O
ATOM 2 P U B1309 31.054 108.106 51.188 1.00 41.39 P
ATOM 3 OP1 U B1309 32.182 107.357 50.577 1.00 39.09 O
ATOM 4 OP2 U B1309 30.571 107.739 52.541 1.00 40.28 O
ATOM 5 O5' U B1309 31.403 109.661 51.203 1.00 39.92 O
ATOM 6 C5' U B1309 31.866 110.318 50.014 1.00 40.42 C
ATOM 7 C4' U B1309 32.036 111.793 50.260 1.00 42.37 C
ATOM 8 O4' U B1309 30.759 112.396 50.588 1.00 43.71 O
ATOM 9 C3' U B1309 32.924 112.164 51.427 1.00 44.39 C
ATOM 10 O3' U B1309 34.291 112.069 51.032 1.00 46.27 O
ATOM 11 C2' U B1309 32.458 113.587 51.728 1.00 43.77 C
ATOM 12 O2' U B1309 32.924 114.535 50.791 1.00 43.26 O
ATOM 13 C1' U B1309 30.953 113.459 51.505 1.00 43.16 C
ATOM 14 N1 U B1309 30.185 113.153 52.719 1.00 45.81 N
ATOM 15 C2 U B1309 29.825 114.202 53.561 1.00 47.20 C
ATOM 16 O2 U B1309 30.149 115.357 53.363 1.00 48.90 O
ATOM 17 N3 U B1309 29.070 113.838 54.652 1.00 47.46 N
ATOM 18 C4 U B1309 28.656 112.559 54.987 1.00 48.19 C
ATOM 19 O4 U B1309 27.938 112.387 55.975 1.00 48.69 O
ATOM 20 C5 U B1309 29.088 111.536 54.082 1.00 48.85 C
ATOM 21 C6 U B1309 29.816 111.859 53.008 1.00 47.34 C
ATOM 22 P G B1310 35.365 111.343 51.992 1.00 47.86 P
ATOM 23 OP1 G B1310 36.494 110.956 51.117 1.00 48.02 O
ATOM 24 OP2 G B1310 34.716 110.323 52.857 1.00 47.68 O
ATOM 25 O5' G B1310 35.862 112.506 52.949 1.00 46.83 O
TER
ATOM 2 P U A1263 25.513 122.112 58.626 1.00 43.29 P
ATOM 3 OP1 U A1263 24.902 123.439 58.360 1.00 44.26 O
ATOM 4 OP2 U A1263 24.723 120.877 58.396 1.00 41.01 O
ATOM 5 O5' U A1263 26.848 121.960 57.781 1.00 40.65 O
ATOM 6 C5' U A1263 27.823 123.012 57.731 1.00 38.30 C
ATOM 7 C4' U A1263 28.903 122.648 56.750 1.00 36.76 C
ATOM 8 O4' U A1263 29.482 121.387 57.162 1.00 35.34 O
ATOM 9 C3' U A1263 28.403 122.389 55.340 1.00 35.77 C
ATOM 10 O3' U A1263 28.340 123.613 54.619 1.00 36.59 O
ATOM 11 C2' U A1263 29.454 121.441 54.787 1.00 34.83 C
ATOM 12 O2' U A1263 30.624 122.122 54.391 1.00 34.46 O
ATOM 13 C1' U A1263 29.787 120.606 56.024 1.00 35.28 C
ATOM 14 N1 U A1263 29.109 119.307 56.156 1.00 35.87 N
ATOM 15 C2 U A1263 29.475 118.284 55.292 1.00 37.54 C
ATOM 16 O2 U A1263 30.297 118.424 54.403 1.00 39.41 O
ATOM 17 N3 U A1263 28.843 117.087 55.511 1.00 37.99 N
ATOM 18 C4 U A1263 27.902 116.815 56.477 1.00 38.67 C
ATOM 19 O4 U A1263 27.439 115.679 56.568 1.00 40.36 O
ATOM 20 C5 U A1263 27.565 117.923 57.313 1.00 37.90 C
ATOM 21 C6 U A1263 28.160 119.100 57.126 1.00 35.97 C
ATOM 22 P C A1264 27.004 124.011 53.825 1.00 36.17 P
ATOM 23 OP1 C A1264 27.017 125.486 53.659 1.00 33.96 O
ATOM 24 OP2 C A1264 25.848 123.362 54.495 1.00 36.58 O
ATOM 25 O5' C A1264 27.198 123.324 52.402 1.00 32.67 O
TER
ATOM 1 O3' G B1308 29.820 107.989 50.168 1.00 39.76 O
ATOM 2 P U B1309 31.054 108.106 51.188 1.00 41.39 P
ATOM 3 OP1 U B1309 32.182 107.357 50.577 1.00 39.09 O
ATOM 4 OP2 U B1309 30.571 107.739 52.541 1.00 40.28 O
ATOM 5 O5' U B1309 31.403 109.661 51.203 1.00 39.92 O
ATOM 6 C5' U B1309 31.866 110.318 50.014 1.00 40.42 C
ATOM 7 C4' U B1309 32.036 111.793 50.260 1.00 42.37 C
ATOM 8 O4' U B1309 30.759 112.396 50.588 1.00 43.71 O
ATOM 9 C3' U B1309 32.924 112.164 51.427 1.00 44.39 C
ATOM 10 O3' U B1309 34.291 112.069 51.032 1.00 46.27 O
ATOM 11 C2' U B1309 32.458 113.587 51.728 1.00 43.77 C
ATOM 12 O2' U B1309 32.924 114.535 50.791 1.00 43.26 O
ATOM 13 C1' U B1309 30.953 113.459 51.505 1.00 43.16 C
ATOM 14 N1 U B1309 30.185 113.153 52.719 1.00 45.81 N
ATOM 15 C2 U B1309 29.825 114.202 53.561 1.00 47.20 C
ATOM 16 O2 U B1309 30.149 115.357 53.363 1.00 48.90 O
ATOM 17 N3 U B1309 29.070 113.838 54.652 1.00 47.46 N
ATOM 18 C4 U B1309 28.656 112.559 54.987 1.00 48.19 C
ATOM 19 O4 U B1309 27.938 112.387 55.975 1.00 48.69 O
ATOM 20 C5 U B1309 29.088 111.536 54.082 1.00 48.85 C
ATOM 21 C6 U B1309 29.816 111.859 53.008 1.00 47.34 C
ATOM 22 P G B1310 35.365 111.343 51.992 1.00 47.86 P
ATOM 23 OP1 G B1310 36.494 110.956 51.117 1.00 48.02 O
ATOM 24 OP2 G B1310 34.716 110.323 52.857 1.00 47.68 O
ATOM 25 O5' G B1310 35.862 112.506 52.949 1.00 46.83 O
TER
Atoms:
C4: (27.902,116.815,56.477)
N3: (28.843,117.087,55.511)
OP1: (24.902,123.439,58.360)
OP2: (24.723,120.877,58.396)
C2: (29.475,118.284,55.292)
C1': (29.787,120.606,56.024)
C3': (28.403,122.389,55.340)
O5': (26.848,121.960,57.781)
O4': (29.482,121.387,57.162)
C5': (27.823,123.012,57.731)
P: (25.513,122.112,58.626)
C4': (28.903,122.648,56.750)
C2': (29.454,121.441,54.787)
O2': (30.624,122.122,54.391)
N1: (29.109,119.307,56.156)
O4: (27.439,115.679,56.568)
O2: (30.297,118.424,54.403)
C6: (28.160,119.100,57.126)
C5: (27.565,117.923,57.313)
O3': (28.340,123.613,54.619)
N3: (28.843,117.087,55.511)
OP1: (24.902,123.439,58.360)
OP2: (24.723,120.877,58.396)
C2: (29.475,118.284,55.292)
C1': (29.787,120.606,56.024)
C3': (28.403,122.389,55.340)
O5': (26.848,121.960,57.781)
O4': (29.482,121.387,57.162)
C5': (27.823,123.012,57.731)
P: (25.513,122.112,58.626)
C4': (28.903,122.648,56.750)
C2': (29.454,121.441,54.787)
O2': (30.624,122.122,54.391)
N1: (29.109,119.307,56.156)
O4: (27.439,115.679,56.568)
O2: (30.297,118.424,54.403)
C6: (28.160,119.100,57.126)
C5: (27.565,117.923,57.313)
O3': (28.340,123.613,54.619)
C4: (28.656,112.559,54.987)
N3: (29.070,113.838,54.652)
OP1: (32.182,107.357,50.577)
OP2: (30.571,107.739,52.541)
C2: (29.825,114.202,53.561)
C1': (30.953,113.459,51.505)
C3': (32.924,112.164,51.427)
O5': (31.403,109.661,51.203)
O4': (30.759,112.396,50.588)
C5': (31.866,110.318,50.014)
P: (31.054,108.106,51.188)
C4': (32.036,111.793,50.260)
C2': (32.458,113.587,51.728)
O2': (32.924,114.535,50.791)
N1: (30.185,113.153,52.719)
O4: (27.938,112.387,55.975)
O2: (30.149,115.357,53.363)
C6: (29.816,111.859,53.008)
C5: (29.088,111.536,54.082)
O3': (34.291,112.069,51.032)
N3: (29.070,113.838,54.652)
OP1: (32.182,107.357,50.577)
OP2: (30.571,107.739,52.541)
C2: (29.825,114.202,53.561)
C1': (30.953,113.459,51.505)
C3': (32.924,112.164,51.427)
O5': (31.403,109.661,51.203)
O4': (30.759,112.396,50.588)
C5': (31.866,110.318,50.014)
P: (31.054,108.106,51.188)
C4': (32.036,111.793,50.260)
C2': (32.458,113.587,51.728)
O2': (32.924,114.535,50.791)
N1: (30.185,113.153,52.719)
O4: (27.938,112.387,55.975)
O2: (30.149,115.357,53.363)
C6: (29.816,111.859,53.008)
C5: (29.088,111.536,54.082)
O3': (34.291,112.069,51.032)
Image (generated by PyMOL):