Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2453:A2485
Extra
PDB:
ATOM 1 O3' A A2452 -105.437 -55.683 -11.848 1.00 0.01 O
ATOM 2 P U A2453 -104.987 -55.133 -13.294 1.00 0.01 P
ATOM 3 OP1 U A2453 -105.983 -54.127 -13.672 1.00 0.01 O
ATOM 4 OP2 U A2453 -104.780 -56.293 -14.184 1.00 0.01 O
ATOM 5 O5' U A2453 -103.599 -54.435 -12.999 1.00 0.01 O
ATOM 6 C5' U A2453 -103.530 -53.159 -12.421 1.00 0.01 C
ATOM 7 C4' U A2453 -102.109 -52.734 -12.280 1.00 0.01 C
ATOM 8 O4' U A2453 -101.438 -53.639 -11.374 1.00 0.01 O
ATOM 9 C3' U A2453 -101.302 -52.795 -13.551 1.00 0.01 C
ATOM 10 O3' U A2453 -101.431 -51.641 -14.330 1.00 0.01 O
ATOM 11 C2' U A2453 -99.885 -53.054 -13.066 1.00 0.01 C
ATOM 12 O2' U A2453 -99.219 -51.848 -12.723 1.00 0.01 O
ATOM 13 C1' U A2453 -100.130 -53.891 -11.803 1.00 0.01 C
ATOM 14 N1 U A2453 -100.025 -55.320 -12.093 1.00 0.44 N
ATOM 15 C2 U A2453 -98.786 -55.887 -12.279 1.00 0.44 C
ATOM 16 O2 U A2453 -97.739 -55.270 -12.143 1.00 0.44 O
ATOM 17 N3 U A2453 -98.812 -57.209 -12.602 1.00 0.44 N
ATOM 18 C4 U A2453 -99.912 -57.987 -12.756 1.00 0.44 C
ATOM 19 O4 U A2453 -99.759 -59.156 -13.041 1.00 0.44 O
ATOM 20 C5 U A2453 -101.145 -57.337 -12.577 1.00 0.44 C
ATOM 21 C6 U A2453 -101.157 -56.047 -12.265 1.00 0.44 C
ATOM 22 P A A2454 -101.737 -51.776 -15.894 1.00 8.85 P
ATOM 23 OP1 A A2454 -102.213 -50.463 -16.386 1.00 8.85 O
ATOM 24 OP2 A A2454 -102.625 -52.941 -16.055 1.00 8.85 O
ATOM 25 O5' A A2454 -100.307 -52.091 -16.497 1.00 8.85 O
TER
ATOM 1 O3' U B2484 -89.875 -58.321 -15.035 1.00 8.27 O
ATOM 2 P U B2485 -89.260 -58.059 -13.570 1.00 0.01 P
ATOM 3 OP1 U B2485 -87.779 -58.202 -13.678 1.00 0.01 O
ATOM 4 OP2 U B2485 -90.007 -58.935 -12.600 1.00 0.01 O
ATOM 5 O5' U B2485 -89.641 -56.548 -13.304 1.00 0.01 O
ATOM 6 C5' U B2485 -89.004 -55.499 -13.992 1.00 0.01 C
ATOM 7 C4' U B2485 -89.960 -54.367 -14.220 1.00 0.01 C
ATOM 8 O4' U B2485 -91.026 -54.817 -15.073 1.00 0.01 O
ATOM 9 C3' U B2485 -90.678 -53.843 -12.985 1.00 0.01 C
ATOM 10 O3' U B2485 -89.900 -52.941 -12.246 1.00 0.01 O
ATOM 11 C2' U B2485 -91.911 -53.213 -13.577 1.00 0.01 C
ATOM 12 O2' U B2485 -91.597 -51.965 -14.165 1.00 0.01 O
ATOM 13 C1' U B2485 -92.233 -54.204 -14.685 1.00 0.01 C
ATOM 14 N1 U B2485 -93.186 -55.259 -14.235 1.00 0.01 N
ATOM 15 C2 U B2485 -94.489 -54.816 -14.117 1.00 0.01 C
ATOM 16 O2 U B2485 -94.811 -53.671 -14.356 1.00 0.01 O
ATOM 17 N3 U B2485 -95.394 -55.743 -13.703 1.00 0.01 N
ATOM 18 C4 U B2485 -95.163 -57.050 -13.417 1.00 0.01 C
ATOM 19 O4 U B2485 -96.141 -57.711 -13.071 1.00 0.01 O
ATOM 20 C5 U B2485 -93.784 -57.455 -13.575 1.00 0.01 C
ATOM 21 C6 U B2485 -92.855 -56.574 -13.965 1.00 0.01 C
ATOM 22 P U B2486 -89.748 -53.107 -10.668 1.00 4.13 P
ATOM 23 OP1 U B2486 -88.401 -52.601 -10.321 1.00 4.13 O
ATOM 24 OP2 U B2486 -90.101 -54.497 -10.332 1.00 4.13 O
ATOM 25 O5' U B2486 -90.859 -52.135 -10.106 1.00 4.13 O
TER
ATOM 2 P U A2453 -104.987 -55.133 -13.294 1.00 0.01 P
ATOM 3 OP1 U A2453 -105.983 -54.127 -13.672 1.00 0.01 O
ATOM 4 OP2 U A2453 -104.780 -56.293 -14.184 1.00 0.01 O
ATOM 5 O5' U A2453 -103.599 -54.435 -12.999 1.00 0.01 O
ATOM 6 C5' U A2453 -103.530 -53.159 -12.421 1.00 0.01 C
ATOM 7 C4' U A2453 -102.109 -52.734 -12.280 1.00 0.01 C
ATOM 8 O4' U A2453 -101.438 -53.639 -11.374 1.00 0.01 O
ATOM 9 C3' U A2453 -101.302 -52.795 -13.551 1.00 0.01 C
ATOM 10 O3' U A2453 -101.431 -51.641 -14.330 1.00 0.01 O
ATOM 11 C2' U A2453 -99.885 -53.054 -13.066 1.00 0.01 C
ATOM 12 O2' U A2453 -99.219 -51.848 -12.723 1.00 0.01 O
ATOM 13 C1' U A2453 -100.130 -53.891 -11.803 1.00 0.01 C
ATOM 14 N1 U A2453 -100.025 -55.320 -12.093 1.00 0.44 N
ATOM 15 C2 U A2453 -98.786 -55.887 -12.279 1.00 0.44 C
ATOM 16 O2 U A2453 -97.739 -55.270 -12.143 1.00 0.44 O
ATOM 17 N3 U A2453 -98.812 -57.209 -12.602 1.00 0.44 N
ATOM 18 C4 U A2453 -99.912 -57.987 -12.756 1.00 0.44 C
ATOM 19 O4 U A2453 -99.759 -59.156 -13.041 1.00 0.44 O
ATOM 20 C5 U A2453 -101.145 -57.337 -12.577 1.00 0.44 C
ATOM 21 C6 U A2453 -101.157 -56.047 -12.265 1.00 0.44 C
ATOM 22 P A A2454 -101.737 -51.776 -15.894 1.00 8.85 P
ATOM 23 OP1 A A2454 -102.213 -50.463 -16.386 1.00 8.85 O
ATOM 24 OP2 A A2454 -102.625 -52.941 -16.055 1.00 8.85 O
ATOM 25 O5' A A2454 -100.307 -52.091 -16.497 1.00 8.85 O
TER
ATOM 1 O3' U B2484 -89.875 -58.321 -15.035 1.00 8.27 O
ATOM 2 P U B2485 -89.260 -58.059 -13.570 1.00 0.01 P
ATOM 3 OP1 U B2485 -87.779 -58.202 -13.678 1.00 0.01 O
ATOM 4 OP2 U B2485 -90.007 -58.935 -12.600 1.00 0.01 O
ATOM 5 O5' U B2485 -89.641 -56.548 -13.304 1.00 0.01 O
ATOM 6 C5' U B2485 -89.004 -55.499 -13.992 1.00 0.01 C
ATOM 7 C4' U B2485 -89.960 -54.367 -14.220 1.00 0.01 C
ATOM 8 O4' U B2485 -91.026 -54.817 -15.073 1.00 0.01 O
ATOM 9 C3' U B2485 -90.678 -53.843 -12.985 1.00 0.01 C
ATOM 10 O3' U B2485 -89.900 -52.941 -12.246 1.00 0.01 O
ATOM 11 C2' U B2485 -91.911 -53.213 -13.577 1.00 0.01 C
ATOM 12 O2' U B2485 -91.597 -51.965 -14.165 1.00 0.01 O
ATOM 13 C1' U B2485 -92.233 -54.204 -14.685 1.00 0.01 C
ATOM 14 N1 U B2485 -93.186 -55.259 -14.235 1.00 0.01 N
ATOM 15 C2 U B2485 -94.489 -54.816 -14.117 1.00 0.01 C
ATOM 16 O2 U B2485 -94.811 -53.671 -14.356 1.00 0.01 O
ATOM 17 N3 U B2485 -95.394 -55.743 -13.703 1.00 0.01 N
ATOM 18 C4 U B2485 -95.163 -57.050 -13.417 1.00 0.01 C
ATOM 19 O4 U B2485 -96.141 -57.711 -13.071 1.00 0.01 O
ATOM 20 C5 U B2485 -93.784 -57.455 -13.575 1.00 0.01 C
ATOM 21 C6 U B2485 -92.855 -56.574 -13.965 1.00 0.01 C
ATOM 22 P U B2486 -89.748 -53.107 -10.668 1.00 4.13 P
ATOM 23 OP1 U B2486 -88.401 -52.601 -10.321 1.00 4.13 O
ATOM 24 OP2 U B2486 -90.101 -54.497 -10.332 1.00 4.13 O
ATOM 25 O5' U B2486 -90.859 -52.135 -10.106 1.00 4.13 O
TER
Atoms:
C4: (-99.912,-57.987,-12.756)
N3: (-98.812,-57.209,-12.602)
OP1: (-105.983,-54.127,-13.672)
OP2: (-104.780,-56.293,-14.184)
C2: (-98.786,-55.887,-12.279)
C1': (-100.130,-53.891,-11.803)
C3': (-101.302,-52.795,-13.551)
O5': (-103.599,-54.435,-12.999)
O4': (-101.438,-53.639,-11.374)
C5': (-103.530,-53.159,-12.421)
P: (-104.987,-55.133,-13.294)
C4': (-102.109,-52.734,-12.280)
C2': (-99.885,-53.054,-13.066)
O2': (-99.219,-51.848,-12.723)
N1: (-100.025,-55.320,-12.093)
O4: (-99.759,-59.156,-13.041)
O2: (-97.739,-55.270,-12.143)
C6: (-101.157,-56.047,-12.265)
C5: (-101.145,-57.337,-12.577)
O3': (-101.431,-51.641,-14.330)
N3: (-98.812,-57.209,-12.602)
OP1: (-105.983,-54.127,-13.672)
OP2: (-104.780,-56.293,-14.184)
C2: (-98.786,-55.887,-12.279)
C1': (-100.130,-53.891,-11.803)
C3': (-101.302,-52.795,-13.551)
O5': (-103.599,-54.435,-12.999)
O4': (-101.438,-53.639,-11.374)
C5': (-103.530,-53.159,-12.421)
P: (-104.987,-55.133,-13.294)
C4': (-102.109,-52.734,-12.280)
C2': (-99.885,-53.054,-13.066)
O2': (-99.219,-51.848,-12.723)
N1: (-100.025,-55.320,-12.093)
O4: (-99.759,-59.156,-13.041)
O2: (-97.739,-55.270,-12.143)
C6: (-101.157,-56.047,-12.265)
C5: (-101.145,-57.337,-12.577)
O3': (-101.431,-51.641,-14.330)
C4: (-95.163,-57.050,-13.417)
N3: (-95.394,-55.743,-13.703)
OP1: (-87.779,-58.202,-13.678)
OP2: (-90.007,-58.935,-12.600)
C2: (-94.489,-54.816,-14.117)
C1': (-92.233,-54.204,-14.685)
C3': (-90.678,-53.843,-12.985)
O5': (-89.641,-56.548,-13.304)
O4': (-91.026,-54.817,-15.073)
C5': (-89.004,-55.499,-13.992)
P: (-89.260,-58.059,-13.570)
C4': (-89.960,-54.367,-14.220)
C2': (-91.911,-53.213,-13.577)
O2': (-91.597,-51.965,-14.165)
N1: (-93.186,-55.259,-14.235)
O4: (-96.141,-57.711,-13.071)
O2: (-94.811,-53.671,-14.356)
C6: (-92.855,-56.574,-13.965)
C5: (-93.784,-57.455,-13.575)
O3': (-89.900,-52.941,-12.246)
N3: (-95.394,-55.743,-13.703)
OP1: (-87.779,-58.202,-13.678)
OP2: (-90.007,-58.935,-12.600)
C2: (-94.489,-54.816,-14.117)
C1': (-92.233,-54.204,-14.685)
C3': (-90.678,-53.843,-12.985)
O5': (-89.641,-56.548,-13.304)
O4': (-91.026,-54.817,-15.073)
C5': (-89.004,-55.499,-13.992)
P: (-89.260,-58.059,-13.570)
C4': (-89.960,-54.367,-14.220)
C2': (-91.911,-53.213,-13.577)
O2': (-91.597,-51.965,-14.165)
N1: (-93.186,-55.259,-14.235)
O4: (-96.141,-57.711,-13.071)
O2: (-94.811,-53.671,-14.356)
C6: (-92.855,-56.574,-13.965)
C5: (-93.784,-57.455,-13.575)
O3': (-89.900,-52.941,-12.246)
Image (generated by PyMOL):