Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:969:9110
Extra
PDB:
ATOM 1 O3' U A 68 55.400 46.468 112.446 1.00 57.41 O
ATOM 2 P U A 69 54.060 47.307 112.690 1.00 56.77 P
ATOM 3 OP1 U A 69 54.020 48.347 111.639 1.00 56.57 O
ATOM 4 OP2 U A 69 54.020 47.707 114.116 1.00 54.98 O
ATOM 5 O5' U A 69 52.902 46.247 112.413 1.00 58.19 O
ATOM 6 C5' U A 69 52.687 45.726 111.089 1.00 62.19 C
ATOM 7 C4' U A 69 51.375 44.976 111.011 1.00 64.98 C
ATOM 8 O4' U A 69 51.476 43.706 111.704 1.00 66.72 O
ATOM 9 C3' U A 69 50.166 45.649 111.633 1.00 66.67 C
ATOM 10 O3' U A 69 49.598 46.605 110.748 1.00 70.75 O
ATOM 11 C2' U A 69 49.233 44.466 111.858 1.00 66.53 C
ATOM 12 O2' U A 69 48.623 44.061 110.647 1.00 66.16 O
ATOM 13 C1' U A 69 50.223 43.380 112.291 1.00 65.28 C
ATOM 14 N1 U A 69 50.408 43.249 113.749 1.00 63.28 N
ATOM 15 C2 U A 69 49.515 42.457 114.459 1.00 62.43 C
ATOM 16 O2 U A 69 48.584 41.867 113.939 1.00 62.15 O
ATOM 17 N3 U A 69 49.760 42.374 115.808 1.00 62.39 N
ATOM 18 C4 U A 69 50.786 42.974 116.508 1.00 63.90 C
ATOM 19 O4 U A 69 50.886 42.787 117.724 1.00 65.41 O
ATOM 20 C5 U A 69 51.664 43.771 115.710 1.00 63.76 C
ATOM 21 C6 U A 69 51.449 43.883 114.396 1.00 64.03 C
ATOM 22 P C A 70 48.705 47.808 111.335 1.00 74.44 P
ATOM 23 OP1 C A 70 48.201 48.561 110.149 1.00 72.94 O
ATOM 24 OP2 C A 70 49.482 48.522 112.389 1.00 73.17 O
ATOM 25 O5' C A 70 47.477 47.075 112.042 1.00 72.96 O
TER
ATOM 1 O3' G B 109 44.614 36.859 123.617 1.00 78.11 O
ATOM 2 P U B 110 45.717 35.996 122.848 1.00 77.60 P
ATOM 3 OP1 U B 110 45.210 34.605 122.730 1.00 77.14 O
ATOM 4 OP2 U B 110 47.022 36.251 123.514 1.00 77.41 O
ATOM 5 O5' U B 110 45.718 36.644 121.393 1.00 77.81 O
ATOM 6 C5' U B 110 44.477 36.835 120.674 1.00 76.50 C
ATOM 7 C4' U B 110 44.730 37.515 119.347 1.00 75.13 C
ATOM 8 O4' U B 110 45.153 38.888 119.548 1.00 75.72 O
ATOM 9 C3' U B 110 45.839 36.904 118.518 1.00 72.29 C
ATOM 10 O3' U B 110 45.349 35.784 117.815 1.00 68.92 O
ATOM 11 C2' U B 110 46.235 38.053 117.602 1.00 72.99 C
ATOM 12 O2' U B 110 45.333 38.224 116.528 1.00 72.87 O
ATOM 13 C1' U B 110 46.091 39.247 118.547 1.00 73.97 C
ATOM 14 N1 U B 110 47.330 39.694 119.207 1.00 75.02 N
ATOM 15 C2 U B 110 48.255 40.400 118.452 1.00 76.27 C
ATOM 16 O2 U B 110 48.126 40.599 117.252 1.00 78.64 O
ATOM 17 N3 U B 110 49.343 40.858 119.152 1.00 75.61 N
ATOM 18 C4 U B 110 49.608 40.673 120.488 1.00 74.97 C
ATOM 19 O4 U B 110 50.600 41.205 120.988 1.00 75.55 O
ATOM 20 C5 U B 110 48.634 39.898 121.186 1.00 75.29 C
ATOM 21 C6 U B 110 47.557 39.446 120.540 1.00 74.63 C
ATOM 22 P U B 111 46.265 34.483 117.676 1.00 67.07 P
ATOM 23 OP1 U B 111 45.508 33.481 116.876 1.00 65.70 O
ATOM 24 OP2 U B 111 46.746 34.134 119.027 1.00 67.27 O
ATOM 25 O5' U B 111 47.502 34.993 116.816 1.00 66.28 O
TER
ATOM 2 P U A 69 54.060 47.307 112.690 1.00 56.77 P
ATOM 3 OP1 U A 69 54.020 48.347 111.639 1.00 56.57 O
ATOM 4 OP2 U A 69 54.020 47.707 114.116 1.00 54.98 O
ATOM 5 O5' U A 69 52.902 46.247 112.413 1.00 58.19 O
ATOM 6 C5' U A 69 52.687 45.726 111.089 1.00 62.19 C
ATOM 7 C4' U A 69 51.375 44.976 111.011 1.00 64.98 C
ATOM 8 O4' U A 69 51.476 43.706 111.704 1.00 66.72 O
ATOM 9 C3' U A 69 50.166 45.649 111.633 1.00 66.67 C
ATOM 10 O3' U A 69 49.598 46.605 110.748 1.00 70.75 O
ATOM 11 C2' U A 69 49.233 44.466 111.858 1.00 66.53 C
ATOM 12 O2' U A 69 48.623 44.061 110.647 1.00 66.16 O
ATOM 13 C1' U A 69 50.223 43.380 112.291 1.00 65.28 C
ATOM 14 N1 U A 69 50.408 43.249 113.749 1.00 63.28 N
ATOM 15 C2 U A 69 49.515 42.457 114.459 1.00 62.43 C
ATOM 16 O2 U A 69 48.584 41.867 113.939 1.00 62.15 O
ATOM 17 N3 U A 69 49.760 42.374 115.808 1.00 62.39 N
ATOM 18 C4 U A 69 50.786 42.974 116.508 1.00 63.90 C
ATOM 19 O4 U A 69 50.886 42.787 117.724 1.00 65.41 O
ATOM 20 C5 U A 69 51.664 43.771 115.710 1.00 63.76 C
ATOM 21 C6 U A 69 51.449 43.883 114.396 1.00 64.03 C
ATOM 22 P C A 70 48.705 47.808 111.335 1.00 74.44 P
ATOM 23 OP1 C A 70 48.201 48.561 110.149 1.00 72.94 O
ATOM 24 OP2 C A 70 49.482 48.522 112.389 1.00 73.17 O
ATOM 25 O5' C A 70 47.477 47.075 112.042 1.00 72.96 O
TER
ATOM 1 O3' G B 109 44.614 36.859 123.617 1.00 78.11 O
ATOM 2 P U B 110 45.717 35.996 122.848 1.00 77.60 P
ATOM 3 OP1 U B 110 45.210 34.605 122.730 1.00 77.14 O
ATOM 4 OP2 U B 110 47.022 36.251 123.514 1.00 77.41 O
ATOM 5 O5' U B 110 45.718 36.644 121.393 1.00 77.81 O
ATOM 6 C5' U B 110 44.477 36.835 120.674 1.00 76.50 C
ATOM 7 C4' U B 110 44.730 37.515 119.347 1.00 75.13 C
ATOM 8 O4' U B 110 45.153 38.888 119.548 1.00 75.72 O
ATOM 9 C3' U B 110 45.839 36.904 118.518 1.00 72.29 C
ATOM 10 O3' U B 110 45.349 35.784 117.815 1.00 68.92 O
ATOM 11 C2' U B 110 46.235 38.053 117.602 1.00 72.99 C
ATOM 12 O2' U B 110 45.333 38.224 116.528 1.00 72.87 O
ATOM 13 C1' U B 110 46.091 39.247 118.547 1.00 73.97 C
ATOM 14 N1 U B 110 47.330 39.694 119.207 1.00 75.02 N
ATOM 15 C2 U B 110 48.255 40.400 118.452 1.00 76.27 C
ATOM 16 O2 U B 110 48.126 40.599 117.252 1.00 78.64 O
ATOM 17 N3 U B 110 49.343 40.858 119.152 1.00 75.61 N
ATOM 18 C4 U B 110 49.608 40.673 120.488 1.00 74.97 C
ATOM 19 O4 U B 110 50.600 41.205 120.988 1.00 75.55 O
ATOM 20 C5 U B 110 48.634 39.898 121.186 1.00 75.29 C
ATOM 21 C6 U B 110 47.557 39.446 120.540 1.00 74.63 C
ATOM 22 P U B 111 46.265 34.483 117.676 1.00 67.07 P
ATOM 23 OP1 U B 111 45.508 33.481 116.876 1.00 65.70 O
ATOM 24 OP2 U B 111 46.746 34.134 119.027 1.00 67.27 O
ATOM 25 O5' U B 111 47.502 34.993 116.816 1.00 66.28 O
TER
Atoms:
C4: (50.786,42.974,116.508)
N3: (49.760,42.374,115.808)
OP1: (54.020,48.347,111.639)
OP2: (54.020,47.707,114.116)
C2: (49.515,42.457,114.459)
C1': (50.223,43.380,112.291)
C3': (50.166,45.649,111.633)
O5': (52.902,46.247,112.413)
O4': (51.476,43.706,111.704)
C5': (52.687,45.726,111.089)
P: (54.060,47.307,112.690)
C4': (51.375,44.976,111.011)
C2': (49.233,44.466,111.858)
O2': (48.623,44.061,110.647)
N1: (50.408,43.249,113.749)
O4: (50.886,42.787,117.724)
O2: (48.584,41.867,113.939)
C6: (51.449,43.883,114.396)
C5: (51.664,43.771,115.710)
O3': (49.598,46.605,110.748)
N3: (49.760,42.374,115.808)
OP1: (54.020,48.347,111.639)
OP2: (54.020,47.707,114.116)
C2: (49.515,42.457,114.459)
C1': (50.223,43.380,112.291)
C3': (50.166,45.649,111.633)
O5': (52.902,46.247,112.413)
O4': (51.476,43.706,111.704)
C5': (52.687,45.726,111.089)
P: (54.060,47.307,112.690)
C4': (51.375,44.976,111.011)
C2': (49.233,44.466,111.858)
O2': (48.623,44.061,110.647)
N1: (50.408,43.249,113.749)
O4: (50.886,42.787,117.724)
O2: (48.584,41.867,113.939)
C6: (51.449,43.883,114.396)
C5: (51.664,43.771,115.710)
O3': (49.598,46.605,110.748)
C4: (49.608,40.673,120.488)
N3: (49.343,40.858,119.152)
OP1: (45.210,34.605,122.730)
OP2: (47.022,36.251,123.514)
C2: (48.255,40.400,118.452)
C1': (46.091,39.247,118.547)
C3': (45.839,36.904,118.518)
O5': (45.718,36.644,121.393)
O4': (45.153,38.888,119.548)
C5': (44.477,36.835,120.674)
P: (45.717,35.996,122.848)
C4': (44.730,37.515,119.347)
C2': (46.235,38.053,117.602)
O2': (45.333,38.224,116.528)
N1: (47.330,39.694,119.207)
O4: (50.600,41.205,120.988)
O2: (48.126,40.599,117.252)
C6: (47.557,39.446,120.540)
C5: (48.634,39.898,121.186)
O3': (45.349,35.784,117.815)
N3: (49.343,40.858,119.152)
OP1: (45.210,34.605,122.730)
OP2: (47.022,36.251,123.514)
C2: (48.255,40.400,118.452)
C1': (46.091,39.247,118.547)
C3': (45.839,36.904,118.518)
O5': (45.718,36.644,121.393)
O4': (45.153,38.888,119.548)
C5': (44.477,36.835,120.674)
P: (45.717,35.996,122.848)
C4': (44.730,37.515,119.347)
C2': (46.235,38.053,117.602)
O2': (45.333,38.224,116.528)
N1: (47.330,39.694,119.207)
O4: (50.600,41.205,120.988)
O2: (48.126,40.599,117.252)
C6: (47.557,39.446,120.540)
C5: (48.634,39.898,121.186)
O3': (45.349,35.784,117.815)
Image (generated by PyMOL):