Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1256:A2009
Extra
PDB:
ATOM 1 O3' A A1255 -52.408 -86.882 6.628 1.00 0.01 O
ATOM 2 P U A1256 -51.566 -86.112 5.534 1.00 0.01 P
ATOM 3 OP1 U A1256 -51.039 -87.122 4.603 1.00 0.01 O
ATOM 4 OP2 U A1256 -50.609 -85.250 6.255 1.00 0.01 O
ATOM 5 O5' U A1256 -52.653 -85.222 4.821 1.00 0.01 O
ATOM 6 C5' U A1256 -53.820 -85.786 4.269 1.00 0.01 C
ATOM 7 C4' U A1256 -54.884 -84.740 4.093 1.00 0.01 C
ATOM 8 O4' U A1256 -55.223 -84.205 5.386 1.00 0.01 O
ATOM 9 C3' U A1256 -54.496 -83.527 3.266 1.00 0.01 C
ATOM 10 O3' U A1256 -54.737 -83.726 1.886 1.00 0.01 O
ATOM 11 C2' U A1256 -55.352 -82.409 3.864 1.00 0.01 C
ATOM 12 O2' U A1256 -56.608 -82.355 3.237 1.00 0.01 O
ATOM 13 C1' U A1256 -55.572 -82.863 5.297 1.00 0.01 C
ATOM 14 N1 U A1256 -54.775 -82.108 6.254 1.00 0.01 N
ATOM 15 C2 U A1256 -55.189 -80.832 6.480 1.00 0.01 C
ATOM 16 O2 U A1256 -56.143 -80.383 5.886 1.00 0.01 O
ATOM 17 N3 U A1256 -54.449 -80.102 7.363 1.00 0.01 N
ATOM 18 C4 U A1256 -53.354 -80.531 8.028 1.00 0.01 C
ATOM 19 O4 U A1256 -52.794 -79.756 8.783 1.00 0.01 O
ATOM 20 C5 U A1256 -52.995 -81.890 7.769 1.00 0.01 C
ATOM 21 C6 U A1256 -53.706 -82.622 6.908 1.00 0.01 C
ATOM 22 P A A1257 -53.564 -84.126 0.874 1.00 0.01 P
ATOM 23 OP1 A A1257 -54.026 -85.255 0.075 1.00 0.01 O
ATOM 24 OP2 A A1257 -52.342 -84.276 1.650 1.00 0.01 O
ATOM 25 O5' A A1257 -53.482 -82.851 -0.036 1.00 0.01 O
TER
ATOM 1 O3' A B2008 -58.593 -71.022 8.377 1.00 0.01 O
ATOM 2 P U B2009 -59.428 -72.007 9.311 1.00 0.01 P
ATOM 3 OP1 U B2009 -60.527 -71.245 9.904 1.00 0.01 O
ATOM 4 OP2 U B2009 -58.468 -72.671 10.197 1.00 0.01 O
ATOM 5 O5' U B2009 -59.995 -73.042 8.291 1.00 0.01 O
ATOM 6 C5' U B2009 -61.132 -72.751 7.521 1.00 0.01 C
ATOM 7 C4' U B2009 -61.243 -73.724 6.390 1.00 0.01 C
ATOM 8 O4' U B2009 -59.914 -74.061 5.945 1.00 0.01 O
ATOM 9 C3' U B2009 -61.886 -75.063 6.718 1.00 0.01 C
ATOM 10 O3' U B2009 -63.289 -75.017 6.613 1.00 0.01 O
ATOM 11 C2' U B2009 -61.259 -75.990 5.704 1.00 0.01 C
ATOM 12 O2' U B2009 -61.953 -75.891 4.476 1.00 0.01 O
ATOM 13 C1' U B2009 -59.870 -75.385 5.521 1.00 0.01 C
ATOM 14 N1 U B2009 -58.850 -76.056 6.289 1.00 0.01 N
ATOM 15 C2 U B2009 -58.515 -77.316 5.913 1.00 0.01 C
ATOM 16 O2 U B2009 -59.083 -77.923 5.035 1.00 0.01 O
ATOM 17 N3 U B2009 -57.519 -77.878 6.628 1.00 0.01 N
ATOM 18 C4 U B2009 -56.820 -77.295 7.650 1.00 0.01 C
ATOM 19 O4 U B2009 -55.941 -77.960 8.230 1.00 0.01 O
ATOM 20 C5 U B2009 -57.215 -75.945 7.940 1.00 0.01 C
ATOM 21 C6 U B2009 -58.198 -75.383 7.260 1.00 0.01 C
ATOM 22 P U B2010 -64.200 -75.518 7.810 1.00 0.01 P
ATOM 23 OP1 U B2010 -65.542 -74.942 7.614 1.00 0.01 O
ATOM 24 OP2 U B2010 -63.487 -75.230 9.044 1.00 0.01 O
ATOM 25 O5' U B2010 -64.250 -77.076 7.585 1.00 0.01 O
TER
ATOM 2 P U A1256 -51.566 -86.112 5.534 1.00 0.01 P
ATOM 3 OP1 U A1256 -51.039 -87.122 4.603 1.00 0.01 O
ATOM 4 OP2 U A1256 -50.609 -85.250 6.255 1.00 0.01 O
ATOM 5 O5' U A1256 -52.653 -85.222 4.821 1.00 0.01 O
ATOM 6 C5' U A1256 -53.820 -85.786 4.269 1.00 0.01 C
ATOM 7 C4' U A1256 -54.884 -84.740 4.093 1.00 0.01 C
ATOM 8 O4' U A1256 -55.223 -84.205 5.386 1.00 0.01 O
ATOM 9 C3' U A1256 -54.496 -83.527 3.266 1.00 0.01 C
ATOM 10 O3' U A1256 -54.737 -83.726 1.886 1.00 0.01 O
ATOM 11 C2' U A1256 -55.352 -82.409 3.864 1.00 0.01 C
ATOM 12 O2' U A1256 -56.608 -82.355 3.237 1.00 0.01 O
ATOM 13 C1' U A1256 -55.572 -82.863 5.297 1.00 0.01 C
ATOM 14 N1 U A1256 -54.775 -82.108 6.254 1.00 0.01 N
ATOM 15 C2 U A1256 -55.189 -80.832 6.480 1.00 0.01 C
ATOM 16 O2 U A1256 -56.143 -80.383 5.886 1.00 0.01 O
ATOM 17 N3 U A1256 -54.449 -80.102 7.363 1.00 0.01 N
ATOM 18 C4 U A1256 -53.354 -80.531 8.028 1.00 0.01 C
ATOM 19 O4 U A1256 -52.794 -79.756 8.783 1.00 0.01 O
ATOM 20 C5 U A1256 -52.995 -81.890 7.769 1.00 0.01 C
ATOM 21 C6 U A1256 -53.706 -82.622 6.908 1.00 0.01 C
ATOM 22 P A A1257 -53.564 -84.126 0.874 1.00 0.01 P
ATOM 23 OP1 A A1257 -54.026 -85.255 0.075 1.00 0.01 O
ATOM 24 OP2 A A1257 -52.342 -84.276 1.650 1.00 0.01 O
ATOM 25 O5' A A1257 -53.482 -82.851 -0.036 1.00 0.01 O
TER
ATOM 1 O3' A B2008 -58.593 -71.022 8.377 1.00 0.01 O
ATOM 2 P U B2009 -59.428 -72.007 9.311 1.00 0.01 P
ATOM 3 OP1 U B2009 -60.527 -71.245 9.904 1.00 0.01 O
ATOM 4 OP2 U B2009 -58.468 -72.671 10.197 1.00 0.01 O
ATOM 5 O5' U B2009 -59.995 -73.042 8.291 1.00 0.01 O
ATOM 6 C5' U B2009 -61.132 -72.751 7.521 1.00 0.01 C
ATOM 7 C4' U B2009 -61.243 -73.724 6.390 1.00 0.01 C
ATOM 8 O4' U B2009 -59.914 -74.061 5.945 1.00 0.01 O
ATOM 9 C3' U B2009 -61.886 -75.063 6.718 1.00 0.01 C
ATOM 10 O3' U B2009 -63.289 -75.017 6.613 1.00 0.01 O
ATOM 11 C2' U B2009 -61.259 -75.990 5.704 1.00 0.01 C
ATOM 12 O2' U B2009 -61.953 -75.891 4.476 1.00 0.01 O
ATOM 13 C1' U B2009 -59.870 -75.385 5.521 1.00 0.01 C
ATOM 14 N1 U B2009 -58.850 -76.056 6.289 1.00 0.01 N
ATOM 15 C2 U B2009 -58.515 -77.316 5.913 1.00 0.01 C
ATOM 16 O2 U B2009 -59.083 -77.923 5.035 1.00 0.01 O
ATOM 17 N3 U B2009 -57.519 -77.878 6.628 1.00 0.01 N
ATOM 18 C4 U B2009 -56.820 -77.295 7.650 1.00 0.01 C
ATOM 19 O4 U B2009 -55.941 -77.960 8.230 1.00 0.01 O
ATOM 20 C5 U B2009 -57.215 -75.945 7.940 1.00 0.01 C
ATOM 21 C6 U B2009 -58.198 -75.383 7.260 1.00 0.01 C
ATOM 22 P U B2010 -64.200 -75.518 7.810 1.00 0.01 P
ATOM 23 OP1 U B2010 -65.542 -74.942 7.614 1.00 0.01 O
ATOM 24 OP2 U B2010 -63.487 -75.230 9.044 1.00 0.01 O
ATOM 25 O5' U B2010 -64.250 -77.076 7.585 1.00 0.01 O
TER
Atoms:
C4: (-53.354,-80.531,8.028)
N3: (-54.449,-80.102,7.363)
OP1: (-51.039,-87.122,4.603)
OP2: (-50.609,-85.250,6.255)
C2: (-55.189,-80.832,6.480)
C1': (-55.572,-82.863,5.297)
C3': (-54.496,-83.527,3.266)
O5': (-52.653,-85.222,4.821)
O4': (-55.223,-84.205,5.386)
C5': (-53.820,-85.786,4.269)
P: (-51.566,-86.112,5.534)
C4': (-54.884,-84.740,4.093)
C2': (-55.352,-82.409,3.864)
O2': (-56.608,-82.355,3.237)
N1: (-54.775,-82.108,6.254)
O4: (-52.794,-79.756,8.783)
O2: (-56.143,-80.383,5.886)
C6: (-53.706,-82.622,6.908)
C5: (-52.995,-81.890,7.769)
O3': (-54.737,-83.726,1.886)
N3: (-54.449,-80.102,7.363)
OP1: (-51.039,-87.122,4.603)
OP2: (-50.609,-85.250,6.255)
C2: (-55.189,-80.832,6.480)
C1': (-55.572,-82.863,5.297)
C3': (-54.496,-83.527,3.266)
O5': (-52.653,-85.222,4.821)
O4': (-55.223,-84.205,5.386)
C5': (-53.820,-85.786,4.269)
P: (-51.566,-86.112,5.534)
C4': (-54.884,-84.740,4.093)
C2': (-55.352,-82.409,3.864)
O2': (-56.608,-82.355,3.237)
N1: (-54.775,-82.108,6.254)
O4: (-52.794,-79.756,8.783)
O2: (-56.143,-80.383,5.886)
C6: (-53.706,-82.622,6.908)
C5: (-52.995,-81.890,7.769)
O3': (-54.737,-83.726,1.886)
C4: (-56.820,-77.295,7.650)
N3: (-57.519,-77.878,6.628)
OP1: (-60.527,-71.245,9.904)
OP2: (-58.468,-72.671,10.197)
C2: (-58.515,-77.316,5.913)
C1': (-59.870,-75.385,5.521)
C3': (-61.886,-75.063,6.718)
O5': (-59.995,-73.042,8.291)
O4': (-59.914,-74.061,5.945)
C5': (-61.132,-72.751,7.521)
P: (-59.428,-72.007,9.311)
C4': (-61.243,-73.724,6.390)
C2': (-61.259,-75.990,5.704)
O2': (-61.953,-75.891,4.476)
N1: (-58.850,-76.056,6.289)
O4: (-55.941,-77.960,8.230)
O2: (-59.083,-77.923,5.035)
C6: (-58.198,-75.383,7.260)
C5: (-57.215,-75.945,7.940)
O3': (-63.289,-75.017,6.613)
N3: (-57.519,-77.878,6.628)
OP1: (-60.527,-71.245,9.904)
OP2: (-58.468,-72.671,10.197)
C2: (-58.515,-77.316,5.913)
C1': (-59.870,-75.385,5.521)
C3': (-61.886,-75.063,6.718)
O5': (-59.995,-73.042,8.291)
O4': (-59.914,-74.061,5.945)
C5': (-61.132,-72.751,7.521)
P: (-59.428,-72.007,9.311)
C4': (-61.243,-73.724,6.390)
C2': (-61.259,-75.990,5.704)
O2': (-61.953,-75.891,4.476)
N1: (-58.850,-76.056,6.289)
O4: (-55.941,-77.960,8.230)
O2: (-59.083,-77.923,5.035)
C6: (-58.198,-75.383,7.260)
C5: (-57.215,-75.945,7.940)
O3': (-63.289,-75.017,6.613)
Image (generated by PyMOL):