ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HVY:E22:E34

Extra

PDB:
ATOM 1 O3' G A 21 -35.614 -32.828 54.132 1.00 42.02 O
ATOM 2 P U A 22 -34.479 -33.819 53.578 1.00 42.09 P
ATOM 3 OP1 U A 22 -34.137 -34.772 54.657 1.00 42.67 O
ATOM 4 OP2 U A 22 -33.405 -33.009 52.963 1.00 42.20 O
ATOM 5 O5' U A 22 -35.233 -34.627 52.418 1.00 42.53 O
ATOM 6 C5' U A 22 -36.395 -35.415 52.684 1.00 42.97 C
ATOM 7 C4' U A 22 -37.116 -35.771 51.396 1.00 43.34 C
ATOM 8 O4' U A 22 -37.418 -34.575 50.637 1.00 43.40 O
ATOM 9 C3' U A 22 -36.305 -36.621 50.431 1.00 43.68 C
ATOM 10 O3' U A 22 -36.401 -37.990 50.799 1.00 44.18 O
ATOM 11 C2' U A 22 -36.968 -36.324 49.087 1.00 43.65 C
ATOM 12 O2' U A 22 -38.097 -37.145 48.833 1.00 43.90 O
ATOM 13 C1' U A 22 -37.394 -34.864 49.247 1.00 43.46 C
ATOM 14 N1 U A 22 -36.510 -33.866 48.539 1.00 43.57 N
ATOM 15 C2 U A 22 -36.679 -33.626 47.180 1.00 43.47 C
ATOM 16 O2 U A 22 -37.511 -34.184 46.484 1.00 43.44 O
ATOM 17 N3 U A 22 -35.820 -32.692 46.645 1.00 43.24 N
ATOM 18 C4 U A 22 -34.835 -31.984 47.314 1.00 43.47 C
ATOM 19 O4 U A 22 -34.143 -31.175 46.702 1.00 43.63 O
ATOM 20 C5 U A 22 -34.716 -32.281 48.720 1.00 43.47 C
ATOM 21 C6 U A 22 -35.541 -33.188 49.264 1.00 43.53 C
ATOM 22 P G A 23 -35.083 -38.890 50.938 1.00 44.66 P
ATOM 23 OP1 G A 23 -35.505 -40.234 51.394 1.00 44.54 O
ATOM 24 OP2 G A 23 -34.078 -38.137 51.721 1.00 44.70 O
ATOM 25 O5' G A 23 -34.560 -38.978 49.429 1.00 44.86 O
TER

ATOM 1 O3' A B 33 -37.383 -33.203 36.438 1.00 43.81 O
ATOM 2 P U B 34 -38.458 -32.099 36.882 1.00 43.75 P
ATOM 3 OP1 U B 34 -39.239 -31.722 35.682 1.00 43.60 O
ATOM 4 OP2 U B 34 -37.750 -31.047 37.648 1.00 43.92 O
ATOM 5 O5' U B 34 -39.415 -32.903 37.885 1.00 43.91 O
ATOM 6 C5' U B 34 -40.256 -33.963 37.422 1.00 44.07 C
ATOM 7 C4' U B 34 -40.739 -34.829 38.574 1.00 44.17 C
ATOM 8 O4' U B 34 -39.608 -35.354 39.317 1.00 44.16 O
ATOM 9 C3' U B 34 -41.565 -34.105 39.627 1.00 44.44 C
ATOM 10 O3' U B 34 -42.921 -33.982 39.207 1.00 44.92 O
ATOM 11 C2' U B 34 -41.386 -35.013 40.841 1.00 44.26 C
ATOM 12 O2' U B 34 -42.219 -36.158 40.820 1.00 44.47 O
ATOM 13 C1' U B 34 -39.918 -35.417 40.702 1.00 44.07 C
ATOM 14 N1 U B 34 -38.949 -34.568 41.509 1.00 43.92 N
ATOM 15 C2 U B 34 -38.862 -34.731 42.889 1.00 43.88 C
ATOM 16 O2 U B 34 -39.527 -35.529 43.531 1.00 43.67 O
ATOM 17 N3 U B 34 -37.950 -33.910 43.516 1.00 43.61 N
ATOM 18 C4 U B 34 -37.127 -32.964 42.924 1.00 43.92 C
ATOM 19 O4 U B 34 -36.359 -32.303 43.618 1.00 43.80 O
ATOM 20 C5 U B 34 -37.269 -32.847 41.492 1.00 43.81 C
ATOM 21 C6 U B 34 -38.152 -33.636 40.860 1.00 43.94 C
ATOM 22 P C B 35 -43.565 -32.538 38.933 1.00 45.25 P
ATOM 23 OP1 C B 35 -44.664 -32.725 37.959 1.00 45.51 O
ATOM 24 OP2 C B 35 -42.487 -31.573 38.628 1.00 45.37 O
ATOM 25 O5' C B 35 -44.180 -32.146 40.359 1.00 45.67 O
TER

Atoms:
C4: (-34.835,-31.984,47.314)
N3: (-35.820,-32.692,46.645)
OP1: (-34.137,-34.772,54.657)
OP2: (-33.405,-33.009,52.963)
C2: (-36.679,-33.626,47.180)
C1': (-37.394,-34.864,49.247)
C3': (-36.305,-36.621,50.431)
O5': (-35.233,-34.627,52.418)
O4': (-37.418,-34.575,50.637)
C5': (-36.395,-35.415,52.684)
P: (-34.479,-33.819,53.578)
C4': (-37.116,-35.771,51.396)
C2': (-36.968,-36.324,49.087)
O2': (-38.097,-37.145,48.833)
N1: (-36.510,-33.866,48.539)
O4: (-34.143,-31.175,46.702)
O2: (-37.511,-34.184,46.484)
C6: (-35.541,-33.188,49.264)
C5: (-34.716,-32.281,48.720)
O3': (-36.401,-37.990,50.799)
C4: (-37.127,-32.964,42.924)
N3: (-37.950,-33.910,43.516)
OP1: (-39.239,-31.722,35.682)
OP2: (-37.750,-31.047,37.648)
C2: (-38.862,-34.731,42.889)
C1': (-39.918,-35.417,40.702)
C3': (-41.565,-34.105,39.627)
O5': (-39.415,-32.903,37.885)
O4': (-39.608,-35.354,39.317)
C5': (-40.256,-33.963,37.422)
P: (-38.458,-32.099,36.882)
C4': (-40.739,-34.829,38.574)
C2': (-41.386,-35.013,40.841)
O2': (-42.219,-36.158,40.820)
N1: (-38.949,-34.568,41.509)
O4: (-36.359,-32.303,43.618)
O2: (-39.527,-35.529,43.531)
C6: (-38.152,-33.636,40.860)
C5: (-37.269,-32.847,41.492)
O3': (-42.921,-33.982,39.207)
Image (generated by PyMOL):
PyMOL image
show in jmol