ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZEV:A1:B16

Extra

PDB:
ATOM 1 P U A 1 -11.543 19.226 31.972 0.50 24.55 P
ATOM 2 OP1 U A 1 -12.158 20.274 31.123 0.50 25.23 O
ATOM 3 OP2 U A 1 -11.381 17.842 31.476 0.50 23.39 O
ATOM 4 O5' U A 1 -10.122 19.774 32.483 0.50 25.82 O
ATOM 5 C5' U A 1 -10.060 20.921 33.348 0.50 25.84 C
ATOM 6 C4' U A 1 -8.631 21.416 33.526 0.50 25.65 C
ATOM 7 O4' U A 1 -8.003 20.698 34.628 0.50 25.09 O
ATOM 8 C3' U A 1 -7.701 21.152 32.344 0.50 24.70 C
ATOM 9 O3' U A 1 -7.909 22.086 31.248 0.50 24.67 O
ATOM 10 C2' U A 1 -6.325 21.214 33.043 0.50 24.42 C
ATOM 11 O2' U A 1 -5.822 22.553 33.307 0.50 19.48 O
ATOM 12 C1' U A 1 -6.614 20.547 34.394 0.50 25.60 C
ATOM 13 N1 U A 1 -6.198 19.111 34.438 0.50 26.40 N
ATOM 14 C2 U A 1 -4.893 18.793 34.778 0.50 27.40 C
ATOM 15 O2 U A 1 -4.047 19.615 35.059 0.50 26.37 O
ATOM 16 N3 U A 1 -4.580 17.455 34.779 0.50 27.73 N
ATOM 17 C4 U A 1 -5.441 16.416 34.493 0.50 28.02 C
ATOM 18 O4 U A 1 -5.032 15.261 34.539 0.50 24.35 O
ATOM 19 C5 U A 1 -6.785 16.818 34.145 0.50 27.25 C
ATOM 20 C6 U A 1 -7.109 18.116 34.131 0.50 27.15 C
ATOM 21 P G A 2 -7.656 21.680 29.704 0.50 24.58 P
ATOM 22 OP1 G A 2 -7.768 22.899 28.853 0.50 29.30 O
ATOM 23 OP2 G A 2 -8.378 20.437 29.311 0.50 26.72 O
ATOM 24 O5' G A 2 -6.101 21.311 29.870 0.50 27.26 O
TER

ATOM 1 O3' C B 15 3.864 10.466 36.397 0.50 29.38 O
ATOM 2 P U B 16 3.150 11.069 37.698 0.50 30.31 P
ATOM 3 OP1 U B 16 4.040 10.840 38.856 0.50 28.08 O
ATOM 4 OP2 U B 16 1.716 10.686 37.747 0.50 28.04 O
ATOM 5 O5' U B 16 3.171 12.638 37.409 0.50 29.77 O
ATOM 6 C5' U B 16 3.515 13.131 36.133 0.50 29.26 C
ATOM 7 C4' U B 16 3.042 14.565 36.079 0.50 28.33 C
ATOM 8 O4' U B 16 1.955 14.683 35.123 0.50 27.86 O
ATOM 9 C3' U B 16 2.432 14.980 37.403 0.50 28.16 C
ATOM 10 O3' U B 16 3.430 15.493 38.288 0.50 27.60 O
ATOM 11 C2' U B 16 1.363 15.999 36.999 0.50 27.90 C
ATOM 12 O2' U B 16 1.874 17.307 36.829 0.50 28.25 O
ATOM 13 C1' U B 16 0.889 15.458 35.651 0.50 28.49 C
ATOM 14 N1 U B 16 -0.319 14.572 35.683 0.50 29.94 N
ATOM 15 C2 U B 16 -1.544 15.085 35.339 0.50 29.23 C
ATOM 16 O2 U B 16 -1.704 16.243 35.017 0.50 29.53 O
ATOM 17 N3 U B 16 -2.593 14.196 35.385 0.50 29.09 N
ATOM 18 C4 U B 16 -2.554 12.865 35.724 0.50 28.72 C
ATOM 19 O4 U B 16 -3.587 12.180 35.722 0.50 29.70 O
ATOM 20 C5 U B 16 -1.238 12.396 36.068 0.50 29.98 C
ATOM 21 C6 U B 16 -0.205 13.239 36.037 0.50 29.88 C
ATOM 22 P G B 17 3.098 15.518 39.852 0.50 26.38 P
ATOM 23 OP1 G B 17 4.319 15.863 40.591 0.50 26.05 O
ATOM 24 OP2 G B 17 2.276 14.349 40.201 0.50 27.24 O
ATOM 25 O5' G B 17 2.062 16.742 39.892 0.50 26.51 O
TER

Atoms:
C4: (-5.441,16.416,34.493)
N3: (-4.580,17.455,34.779)
OP1: (-12.158,20.274,31.123)
OP2: (-11.381,17.842,31.476)
C2: (-4.893,18.793,34.778)
C1': (-6.614,20.547,34.394)
C3': (-7.701,21.152,32.344)
O5': (-10.122,19.774,32.483)
O4': (-8.003,20.698,34.628)
C5': (-10.060,20.921,33.348)
P: (-11.543,19.226,31.972)
C4': (-8.631,21.416,33.526)
C2': (-6.325,21.214,33.043)
O2': (-5.822,22.553,33.307)
N1: (-6.198,19.111,34.438)
O4: (-5.032,15.261,34.539)
O2: (-4.047,19.615,35.059)
C6: (-7.109,18.116,34.131)
C5: (-6.785,16.818,34.145)
O3': (-7.909,22.086,31.248)
C4: (-2.554,12.865,35.724)
N3: (-2.593,14.196,35.385)
OP1: (4.040,10.840,38.856)
OP2: (1.716,10.686,37.747)
C2: (-1.544,15.085,35.339)
C1': (0.889,15.458,35.651)
C3': (2.432,14.980,37.403)
O5': (3.171,12.638,37.409)
O4': (1.955,14.683,35.123)
C5': (3.515,13.131,36.133)
P: (3.150,11.069,37.698)
C4': (3.042,14.565,36.079)
C2': (1.363,15.999,36.999)
O2': (1.874,17.307,36.829)
N1: (-0.319,14.572,35.683)
O4: (-3.587,12.180,35.722)
O2: (-1.704,16.243,35.017)
C6: (-0.205,13.239,36.037)
C5: (-1.238,12.396,36.068)
O3': (3.430,15.493,38.288)
Image (generated by PyMOL):
PyMOL image
show in jmol