Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12765:12793
Extra
PDB:
ATOM 1 O3' A A2764 19.403 38.335 30.872 1.00 49.29 O
ATOM 2 P U A2765 18.012 38.058 30.171 1.00 52.14 P
ATOM 3 OP1 U A2765 18.185 36.910 29.260 1.00 52.00 O
ATOM 4 OP2 U A2765 17.565 39.351 29.612 1.00 52.72 O
ATOM 5 O5' U A2765 17.067 37.646 31.382 1.00 51.90 O
ATOM 6 C5' U A2765 17.169 36.370 31.990 1.00 51.39 C
ATOM 7 C4' U A2765 16.107 36.161 33.043 1.00 51.28 C
ATOM 8 O4' U A2765 16.137 37.245 34.008 1.00 51.38 O
ATOM 9 C3' U A2765 14.696 36.167 32.548 1.00 51.62 C
ATOM 10 O3' U A2765 14.317 34.943 31.938 1.00 51.48 O
ATOM 11 C2' U A2765 13.904 36.521 33.793 1.00 51.59 C
ATOM 12 O2' U A2765 13.754 35.379 34.592 1.00 51.14 O
ATOM 13 C1' U A2765 14.849 37.478 34.511 1.00 51.56 C
ATOM 14 N1 U A2765 14.523 38.890 34.278 1.00 52.08 N
ATOM 15 C2 U A2765 13.441 39.530 34.860 1.00 52.34 C
ATOM 16 O2 U A2765 12.602 39.012 35.596 1.00 52.18 O
ATOM 17 N3 U A2765 13.337 40.863 34.524 1.00 52.83 N
ATOM 18 C4 U A2765 14.151 41.620 33.709 1.00 53.09 C
ATOM 19 O4 U A2765 13.887 42.811 33.514 1.00 53.56 O
ATOM 20 C5 U A2765 15.237 40.891 33.165 1.00 52.79 C
ATOM 21 C6 U A2765 15.372 39.608 33.476 1.00 52.31 C
ATOM 22 P U A2766 13.549 35.006 30.534 1.00 46.75 P
ATOM 23 OP1 U A2766 13.653 33.688 29.873 1.00 46.53 O
ATOM 24 OP2 U A2766 14.096 36.202 29.824 1.00 47.15 O
ATOM 25 O5' U A2766 12.038 35.268 30.988 1.00 46.99 O
TER
ATOM 1 O3' A B2792 5.542 45.015 40.292 1.00 51.94 O
ATOM 2 P U B2793 6.845 44.689 41.174 1.00 53.01 P
ATOM 3 OP1 U B2793 6.411 44.807 42.592 1.00 52.92 O
ATOM 4 OP2 U B2793 7.981 45.536 40.683 1.00 53.16 O
ATOM 5 O5' U B2793 7.130 43.174 40.809 1.00 52.51 O
ATOM 6 C5' U B2793 6.222 42.162 41.154 1.00 52.30 C
ATOM 7 C4' U B2793 6.689 40.845 40.629 1.00 51.88 C
ATOM 8 O4' U B2793 6.867 40.932 39.205 1.00 52.11 O
ATOM 9 C3' U B2793 8.042 40.378 41.105 1.00 51.38 C
ATOM 10 O3' U B2793 7.995 39.827 42.394 1.00 51.02 O
ATOM 11 C2' U B2793 8.396 39.360 40.048 1.00 51.18 C
ATOM 12 O2' U B2793 7.642 38.188 40.263 1.00 50.93 O
ATOM 13 C1' U B2793 7.849 40.023 38.796 1.00 51.71 C
ATOM 14 N1 U B2793 8.862 40.749 38.034 1.00 51.87 N
ATOM 15 C2 U B2793 9.865 40.030 37.396 1.00 51.57 C
ATOM 16 O2 U B2793 9.936 38.800 37.536 1.00 51.16 O
ATOM 17 N3 U B2793 10.782 40.761 36.630 1.00 51.77 N
ATOM 18 C4 U B2793 10.723 42.127 36.461 1.00 52.25 C
ATOM 19 O4 U B2793 11.576 42.709 35.792 1.00 52.41 O
ATOM 20 C5 U B2793 9.639 42.780 37.148 1.00 52.53 C
ATOM 21 C6 U B2793 8.762 42.095 37.891 1.00 52.34 C
ATOM 22 P U B2794 9.106 40.208 43.460 1.00 46.82 P
ATOM 23 OP1 U B2794 8.607 39.765 44.788 1.00 46.59 O
ATOM 24 OP2 U B2794 9.445 41.660 43.245 1.00 47.25 O
ATOM 25 O5' U B2794 10.315 39.295 43.026 1.00 46.38 O
TER
ATOM 2 P U A2765 18.012 38.058 30.171 1.00 52.14 P
ATOM 3 OP1 U A2765 18.185 36.910 29.260 1.00 52.00 O
ATOM 4 OP2 U A2765 17.565 39.351 29.612 1.00 52.72 O
ATOM 5 O5' U A2765 17.067 37.646 31.382 1.00 51.90 O
ATOM 6 C5' U A2765 17.169 36.370 31.990 1.00 51.39 C
ATOM 7 C4' U A2765 16.107 36.161 33.043 1.00 51.28 C
ATOM 8 O4' U A2765 16.137 37.245 34.008 1.00 51.38 O
ATOM 9 C3' U A2765 14.696 36.167 32.548 1.00 51.62 C
ATOM 10 O3' U A2765 14.317 34.943 31.938 1.00 51.48 O
ATOM 11 C2' U A2765 13.904 36.521 33.793 1.00 51.59 C
ATOM 12 O2' U A2765 13.754 35.379 34.592 1.00 51.14 O
ATOM 13 C1' U A2765 14.849 37.478 34.511 1.00 51.56 C
ATOM 14 N1 U A2765 14.523 38.890 34.278 1.00 52.08 N
ATOM 15 C2 U A2765 13.441 39.530 34.860 1.00 52.34 C
ATOM 16 O2 U A2765 12.602 39.012 35.596 1.00 52.18 O
ATOM 17 N3 U A2765 13.337 40.863 34.524 1.00 52.83 N
ATOM 18 C4 U A2765 14.151 41.620 33.709 1.00 53.09 C
ATOM 19 O4 U A2765 13.887 42.811 33.514 1.00 53.56 O
ATOM 20 C5 U A2765 15.237 40.891 33.165 1.00 52.79 C
ATOM 21 C6 U A2765 15.372 39.608 33.476 1.00 52.31 C
ATOM 22 P U A2766 13.549 35.006 30.534 1.00 46.75 P
ATOM 23 OP1 U A2766 13.653 33.688 29.873 1.00 46.53 O
ATOM 24 OP2 U A2766 14.096 36.202 29.824 1.00 47.15 O
ATOM 25 O5' U A2766 12.038 35.268 30.988 1.00 46.99 O
TER
ATOM 1 O3' A B2792 5.542 45.015 40.292 1.00 51.94 O
ATOM 2 P U B2793 6.845 44.689 41.174 1.00 53.01 P
ATOM 3 OP1 U B2793 6.411 44.807 42.592 1.00 52.92 O
ATOM 4 OP2 U B2793 7.981 45.536 40.683 1.00 53.16 O
ATOM 5 O5' U B2793 7.130 43.174 40.809 1.00 52.51 O
ATOM 6 C5' U B2793 6.222 42.162 41.154 1.00 52.30 C
ATOM 7 C4' U B2793 6.689 40.845 40.629 1.00 51.88 C
ATOM 8 O4' U B2793 6.867 40.932 39.205 1.00 52.11 O
ATOM 9 C3' U B2793 8.042 40.378 41.105 1.00 51.38 C
ATOM 10 O3' U B2793 7.995 39.827 42.394 1.00 51.02 O
ATOM 11 C2' U B2793 8.396 39.360 40.048 1.00 51.18 C
ATOM 12 O2' U B2793 7.642 38.188 40.263 1.00 50.93 O
ATOM 13 C1' U B2793 7.849 40.023 38.796 1.00 51.71 C
ATOM 14 N1 U B2793 8.862 40.749 38.034 1.00 51.87 N
ATOM 15 C2 U B2793 9.865 40.030 37.396 1.00 51.57 C
ATOM 16 O2 U B2793 9.936 38.800 37.536 1.00 51.16 O
ATOM 17 N3 U B2793 10.782 40.761 36.630 1.00 51.77 N
ATOM 18 C4 U B2793 10.723 42.127 36.461 1.00 52.25 C
ATOM 19 O4 U B2793 11.576 42.709 35.792 1.00 52.41 O
ATOM 20 C5 U B2793 9.639 42.780 37.148 1.00 52.53 C
ATOM 21 C6 U B2793 8.762 42.095 37.891 1.00 52.34 C
ATOM 22 P U B2794 9.106 40.208 43.460 1.00 46.82 P
ATOM 23 OP1 U B2794 8.607 39.765 44.788 1.00 46.59 O
ATOM 24 OP2 U B2794 9.445 41.660 43.245 1.00 47.25 O
ATOM 25 O5' U B2794 10.315 39.295 43.026 1.00 46.38 O
TER
Atoms:
C4: (14.151,41.620,33.709)
N3: (13.337,40.863,34.524)
OP1: (18.185,36.910,29.260)
OP2: (17.565,39.351,29.612)
C2: (13.441,39.530,34.860)
C1': (14.849,37.478,34.511)
C3': (14.696,36.167,32.548)
O5': (17.067,37.646,31.382)
O4': (16.137,37.245,34.008)
C5': (17.169,36.370,31.990)
P: (18.012,38.058,30.171)
C4': (16.107,36.161,33.043)
C2': (13.904,36.521,33.793)
O2': (13.754,35.379,34.592)
N1: (14.523,38.890,34.278)
O4: (13.887,42.811,33.514)
O2: (12.602,39.012,35.596)
C6: (15.372,39.608,33.476)
C5: (15.237,40.891,33.165)
O3': (14.317,34.943,31.938)
N3: (13.337,40.863,34.524)
OP1: (18.185,36.910,29.260)
OP2: (17.565,39.351,29.612)
C2: (13.441,39.530,34.860)
C1': (14.849,37.478,34.511)
C3': (14.696,36.167,32.548)
O5': (17.067,37.646,31.382)
O4': (16.137,37.245,34.008)
C5': (17.169,36.370,31.990)
P: (18.012,38.058,30.171)
C4': (16.107,36.161,33.043)
C2': (13.904,36.521,33.793)
O2': (13.754,35.379,34.592)
N1: (14.523,38.890,34.278)
O4: (13.887,42.811,33.514)
O2: (12.602,39.012,35.596)
C6: (15.372,39.608,33.476)
C5: (15.237,40.891,33.165)
O3': (14.317,34.943,31.938)
C4: (10.723,42.127,36.461)
N3: (10.782,40.761,36.630)
OP1: (6.411,44.807,42.592)
OP2: (7.981,45.536,40.683)
C2: (9.865,40.030,37.396)
C1': (7.849,40.023,38.796)
C3': (8.042,40.378,41.105)
O5': (7.130,43.174,40.809)
O4': (6.867,40.932,39.205)
C5': (6.222,42.162,41.154)
P: (6.845,44.689,41.174)
C4': (6.689,40.845,40.629)
C2': (8.396,39.360,40.048)
O2': (7.642,38.188,40.263)
N1: (8.862,40.749,38.034)
O4: (11.576,42.709,35.792)
O2: (9.936,38.800,37.536)
C6: (8.762,42.095,37.891)
C5: (9.639,42.780,37.148)
O3': (7.995,39.827,42.394)
N3: (10.782,40.761,36.630)
OP1: (6.411,44.807,42.592)
OP2: (7.981,45.536,40.683)
C2: (9.865,40.030,37.396)
C1': (7.849,40.023,38.796)
C3': (8.042,40.378,41.105)
O5': (7.130,43.174,40.809)
O4': (6.867,40.932,39.205)
C5': (6.222,42.162,41.154)
P: (6.845,44.689,41.174)
C4': (6.689,40.845,40.629)
C2': (8.396,39.360,40.048)
O2': (7.642,38.188,40.263)
N1: (8.862,40.749,38.034)
O4: (11.576,42.709,35.792)
O2: (9.936,38.800,37.536)
C6: (8.762,42.095,37.891)
C5: (9.639,42.780,37.148)
O3': (7.995,39.827,42.394)
Image (generated by PyMOL):