ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A379:A386

Extra

PDB:
ATOM 1 O3' G A 378 81.685 105.605 47.539 1.00 43.06 O
ATOM 2 P U A 379 80.373 104.814 47.988 1.00 40.88 P
ATOM 3 OP1 U A 379 79.537 105.785 48.730 1.00 41.09 O
ATOM 4 OP2 U A 379 80.785 103.549 48.640 1.00 40.89 O
ATOM 5 O5' U A 379 79.643 104.498 46.608 1.00 40.62 O
ATOM 6 C5' U A 379 79.156 105.579 45.792 1.00 41.15 C
ATOM 7 C4' U A 379 78.543 105.064 44.507 1.00 41.71 C
ATOM 8 O4' U A 379 79.581 104.572 43.639 1.00 42.60 O
ATOM 9 C3' U A 379 77.579 103.896 44.640 1.00 40.81 C
ATOM 10 O3' U A 379 76.278 104.345 44.881 1.00 40.54 O
ATOM 11 C2' U A 379 77.648 103.231 43.282 1.00 41.47 C
ATOM 12 O2' U A 379 76.874 103.876 42.292 1.00 43.79 O
ATOM 13 C1' U A 379 79.124 103.408 42.976 1.00 42.11 C
ATOM 14 N1 U A 379 79.858 102.265 43.507 1.00 42.37 N
ATOM 15 C2 U A 379 79.815 101.132 42.765 1.00 41.62 C
ATOM 16 O2 U A 379 79.102 101.014 41.760 1.00 41.68 O
ATOM 17 N3 U A 379 80.599 100.122 43.234 1.00 42.22 N
ATOM 18 C4 U A 379 81.358 100.119 44.370 1.00 43.17 C
ATOM 19 O4 U A 379 82.028 99.120 44.641 1.00 46.48 O
ATOM 20 C5 U A 379 81.295 101.319 45.128 1.00 42.53 C
ATOM 21 C6 U A 379 80.570 102.331 44.678 1.00 42.03 C
ATOM 22 P U A 380 75.260 103.394 45.652 1.00 42.02 P
ATOM 23 OP1 U A 380 74.099 104.252 45.937 1.00 42.55 O
ATOM 24 OP2 U A 380 75.986 102.733 46.770 1.00 41.59 O
ATOM 25 O5' U A 380 74.840 102.309 44.560 1.00 41.76 O
TER

ATOM 1 O3' A B 385 79.683 91.813 35.890 1.00 55.46 O
ATOM 2 P U B 386 80.102 93.131 36.700 1.00 53.52 P
ATOM 3 OP1 U B 386 81.580 93.303 36.614 1.00 52.94 O
ATOM 4 OP2 U B 386 79.462 92.995 38.016 1.00 53.72 O
ATOM 5 O5' U B 386 79.381 94.310 35.914 1.00 50.30 O
ATOM 6 C5' U B 386 77.994 94.217 35.574 1.00 47.39 C
ATOM 7 C4' U B 386 77.323 95.561 35.741 1.00 47.05 C
ATOM 8 O4' U B 386 77.000 95.795 37.131 1.00 46.20 O
ATOM 9 C3' U B 386 78.104 96.795 35.301 1.00 46.64 C
ATOM 10 O3' U B 386 77.969 97.036 33.891 1.00 49.54 O
ATOM 11 C2' U B 386 77.420 97.898 36.097 1.00 45.15 C
ATOM 12 O2' U B 386 76.217 98.278 35.473 1.00 42.80 O
ATOM 13 C1' U B 386 77.114 97.181 37.419 1.00 44.89 C
ATOM 14 N1 U B 386 78.146 97.338 38.463 1.00 44.63 N
ATOM 15 C2 U B 386 78.241 98.543 39.154 1.00 43.29 C
ATOM 16 O2 U B 386 77.531 99.506 38.947 1.00 43.12 O
ATOM 17 N3 U B 386 79.205 98.572 40.123 1.00 44.41 N
ATOM 18 C4 U B 386 80.060 97.553 40.503 1.00 45.41 C
ATOM 19 O4 U B 386 80.735 97.678 41.535 1.00 45.68 O
ATOM 20 C5 U B 386 79.925 96.361 39.743 1.00 46.10 C
ATOM 21 C6 U B 386 79.000 96.292 38.770 1.00 45.54 C
ATOM 22 P C B 387 79.243 97.516 33.028 1.00 51.44 P
ATOM 23 OP1 C B 387 78.906 97.381 31.578 1.00 49.18 O
ATOM 24 OP2 C B 387 80.424 96.786 33.590 1.00 50.79 O
ATOM 25 O5' C B 387 79.385 99.068 33.370 1.00 50.02 O
TER

Atoms:
C4: (81.358,100.119,44.370)
N3: (80.599,100.122,43.234)
OP1: (79.537,105.785,48.730)
OP2: (80.785,103.549,48.640)
C2: (79.815,101.132,42.765)
C1': (79.124,103.408,42.976)
C3': (77.579,103.896,44.640)
O5': (79.643,104.498,46.608)
O4': (79.581,104.572,43.639)
C5': (79.156,105.579,45.792)
P: (80.373,104.814,47.988)
C4': (78.543,105.064,44.507)
C2': (77.648,103.231,43.282)
O2': (76.874,103.876,42.292)
N1: (79.858,102.265,43.507)
O4: (82.028,99.120,44.641)
O2: (79.102,101.014,41.760)
C6: (80.570,102.331,44.678)
C5: (81.295,101.319,45.128)
O3': (76.278,104.345,44.881)
C4: (80.060,97.553,40.503)
N3: (79.205,98.572,40.123)
OP1: (81.580,93.303,36.614)
OP2: (79.462,92.995,38.016)
C2: (78.241,98.543,39.154)
C1': (77.114,97.181,37.419)
C3': (78.104,96.795,35.301)
O5': (79.381,94.310,35.914)
O4': (77.000,95.795,37.131)
C5': (77.994,94.217,35.574)
P: (80.102,93.131,36.700)
C4': (77.323,95.561,35.741)
C2': (77.420,97.898,36.097)
O2': (76.217,98.278,35.473)
N1: (78.146,97.338,38.463)
O4: (80.735,97.678,41.535)
O2: (77.531,99.506,38.947)
C6: (79.000,96.292,38.770)
C5: (79.925,96.361,39.743)
O3': (77.969,97.036,33.891)
Image (generated by PyMOL):
PyMOL image
show in jmol