Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01263:01309
Extra
PDB:
ATOM 1 O3' C A1262 25.669 121.265 60.377 1.00 44.09 O
ATOM 2 P U A1263 25.002 121.341 58.924 1.00 44.70 P
ATOM 3 OP1 U A1263 24.434 122.701 58.842 1.00 46.78 O
ATOM 4 OP2 U A1263 24.132 120.156 58.712 1.00 46.65 O
ATOM 5 O5' U A1263 26.223 121.199 57.916 1.00 44.04 O
ATOM 6 C5' U A1263 27.295 122.156 57.907 1.00 39.95 C
ATOM 7 C4' U A1263 28.362 121.713 56.939 1.00 38.81 C
ATOM 8 O4' U A1263 28.861 120.423 57.366 1.00 37.52 O
ATOM 9 C3' U A1263 27.916 121.467 55.505 1.00 37.49 C
ATOM 10 O3' U A1263 27.910 122.684 54.768 1.00 38.94 O
ATOM 11 C2' U A1263 29.010 120.540 54.995 1.00 39.30 C
ATOM 12 O2' U A1263 30.196 121.231 54.676 1.00 43.54 O
ATOM 13 C1' U A1263 29.306 119.699 56.238 1.00 39.65 C
ATOM 14 N1 U A1263 28.710 118.354 56.254 1.00 40.29 N
ATOM 15 C2 U A1263 29.253 117.418 55.405 1.00 39.55 C
ATOM 16 O2 U A1263 30.138 117.675 54.617 1.00 42.84 O
ATOM 17 N3 U A1263 28.720 116.166 55.509 1.00 41.70 N
ATOM 18 C4 U A1263 27.708 115.764 56.341 1.00 40.54 C
ATOM 19 O4 U A1263 27.362 114.589 56.327 1.00 44.71 O
ATOM 20 C5 U A1263 27.158 116.794 57.158 1.00 38.68 C
ATOM 21 C6 U A1263 27.666 118.024 57.091 1.00 39.26 C
ATOM 22 P C A1264 26.611 123.125 53.917 1.00 39.90 P
ATOM 23 OP1 C A1264 26.771 124.572 53.651 1.00 40.16 O
ATOM 24 OP2 C A1264 25.371 122.643 54.570 1.00 41.22 O
ATOM 25 O5' C A1264 26.778 122.353 52.535 1.00 37.77 O
TER
ATOM 1 O3' G B1308 29.509 107.103 50.147 1.00 43.77 O
ATOM 2 P U B1309 30.730 107.168 51.173 1.00 45.59 P
ATOM 3 OP1 U B1309 31.815 106.346 50.590 1.00 45.24 O
ATOM 4 OP2 U B1309 30.225 106.860 52.535 1.00 45.12 O
ATOM 5 O5' U B1309 31.148 108.704 51.164 1.00 45.81 O
ATOM 6 C5' U B1309 31.593 109.354 49.964 1.00 45.91 C
ATOM 7 C4' U B1309 31.780 110.826 50.226 1.00 49.99 C
ATOM 8 O4' U B1309 30.496 111.441 50.523 1.00 48.76 O
ATOM 9 C3' U B1309 32.630 111.157 51.444 1.00 52.48 C
ATOM 10 O3' U B1309 34.025 111.079 51.149 1.00 54.23 O
ATOM 11 C2' U B1309 32.168 112.571 51.766 1.00 52.00 C
ATOM 12 O2' U B1309 32.699 113.492 50.842 1.00 54.46 O
ATOM 13 C1' U B1309 30.667 112.462 51.502 1.00 50.24 C
ATOM 14 N1 U B1309 29.881 112.103 52.695 1.00 50.98 N
ATOM 15 C2 U B1309 29.464 113.127 53.556 1.00 51.37 C
ATOM 16 O2 U B1309 29.739 114.299 53.385 1.00 52.51 O
ATOM 17 N3 U B1309 28.710 112.713 54.628 1.00 49.77 N
ATOM 18 C4 U B1309 28.349 111.409 54.936 1.00 52.74 C
ATOM 19 O4 U B1309 27.669 111.186 55.940 1.00 52.04 O
ATOM 20 C5 U B1309 28.827 110.418 54.014 1.00 51.46 C
ATOM 21 C6 U B1309 29.555 110.787 52.956 1.00 50.68 C
ATOM 22 P G B1310 34.993 110.166 52.068 1.00 58.55 P
ATOM 23 OP1 G B1310 36.106 109.771 51.189 1.00 61.32 O
ATOM 24 OP2 G B1310 34.230 109.124 52.789 1.00 60.38 O
ATOM 25 O5' G B1310 35.550 111.165 53.171 1.00 56.40 O
TER
ATOM 2 P U A1263 25.002 121.341 58.924 1.00 44.70 P
ATOM 3 OP1 U A1263 24.434 122.701 58.842 1.00 46.78 O
ATOM 4 OP2 U A1263 24.132 120.156 58.712 1.00 46.65 O
ATOM 5 O5' U A1263 26.223 121.199 57.916 1.00 44.04 O
ATOM 6 C5' U A1263 27.295 122.156 57.907 1.00 39.95 C
ATOM 7 C4' U A1263 28.362 121.713 56.939 1.00 38.81 C
ATOM 8 O4' U A1263 28.861 120.423 57.366 1.00 37.52 O
ATOM 9 C3' U A1263 27.916 121.467 55.505 1.00 37.49 C
ATOM 10 O3' U A1263 27.910 122.684 54.768 1.00 38.94 O
ATOM 11 C2' U A1263 29.010 120.540 54.995 1.00 39.30 C
ATOM 12 O2' U A1263 30.196 121.231 54.676 1.00 43.54 O
ATOM 13 C1' U A1263 29.306 119.699 56.238 1.00 39.65 C
ATOM 14 N1 U A1263 28.710 118.354 56.254 1.00 40.29 N
ATOM 15 C2 U A1263 29.253 117.418 55.405 1.00 39.55 C
ATOM 16 O2 U A1263 30.138 117.675 54.617 1.00 42.84 O
ATOM 17 N3 U A1263 28.720 116.166 55.509 1.00 41.70 N
ATOM 18 C4 U A1263 27.708 115.764 56.341 1.00 40.54 C
ATOM 19 O4 U A1263 27.362 114.589 56.327 1.00 44.71 O
ATOM 20 C5 U A1263 27.158 116.794 57.158 1.00 38.68 C
ATOM 21 C6 U A1263 27.666 118.024 57.091 1.00 39.26 C
ATOM 22 P C A1264 26.611 123.125 53.917 1.00 39.90 P
ATOM 23 OP1 C A1264 26.771 124.572 53.651 1.00 40.16 O
ATOM 24 OP2 C A1264 25.371 122.643 54.570 1.00 41.22 O
ATOM 25 O5' C A1264 26.778 122.353 52.535 1.00 37.77 O
TER
ATOM 1 O3' G B1308 29.509 107.103 50.147 1.00 43.77 O
ATOM 2 P U B1309 30.730 107.168 51.173 1.00 45.59 P
ATOM 3 OP1 U B1309 31.815 106.346 50.590 1.00 45.24 O
ATOM 4 OP2 U B1309 30.225 106.860 52.535 1.00 45.12 O
ATOM 5 O5' U B1309 31.148 108.704 51.164 1.00 45.81 O
ATOM 6 C5' U B1309 31.593 109.354 49.964 1.00 45.91 C
ATOM 7 C4' U B1309 31.780 110.826 50.226 1.00 49.99 C
ATOM 8 O4' U B1309 30.496 111.441 50.523 1.00 48.76 O
ATOM 9 C3' U B1309 32.630 111.157 51.444 1.00 52.48 C
ATOM 10 O3' U B1309 34.025 111.079 51.149 1.00 54.23 O
ATOM 11 C2' U B1309 32.168 112.571 51.766 1.00 52.00 C
ATOM 12 O2' U B1309 32.699 113.492 50.842 1.00 54.46 O
ATOM 13 C1' U B1309 30.667 112.462 51.502 1.00 50.24 C
ATOM 14 N1 U B1309 29.881 112.103 52.695 1.00 50.98 N
ATOM 15 C2 U B1309 29.464 113.127 53.556 1.00 51.37 C
ATOM 16 O2 U B1309 29.739 114.299 53.385 1.00 52.51 O
ATOM 17 N3 U B1309 28.710 112.713 54.628 1.00 49.77 N
ATOM 18 C4 U B1309 28.349 111.409 54.936 1.00 52.74 C
ATOM 19 O4 U B1309 27.669 111.186 55.940 1.00 52.04 O
ATOM 20 C5 U B1309 28.827 110.418 54.014 1.00 51.46 C
ATOM 21 C6 U B1309 29.555 110.787 52.956 1.00 50.68 C
ATOM 22 P G B1310 34.993 110.166 52.068 1.00 58.55 P
ATOM 23 OP1 G B1310 36.106 109.771 51.189 1.00 61.32 O
ATOM 24 OP2 G B1310 34.230 109.124 52.789 1.00 60.38 O
ATOM 25 O5' G B1310 35.550 111.165 53.171 1.00 56.40 O
TER
Atoms:
C4: (27.708,115.764,56.341)
N3: (28.720,116.166,55.509)
OP1: (24.434,122.701,58.842)
OP2: (24.132,120.156,58.712)
C2: (29.253,117.418,55.405)
C1': (29.306,119.699,56.238)
C3': (27.916,121.467,55.505)
O5': (26.223,121.199,57.916)
O4': (28.861,120.423,57.366)
C5': (27.295,122.156,57.907)
P: (25.002,121.341,58.924)
C4': (28.362,121.713,56.939)
C2': (29.010,120.540,54.995)
O2': (30.196,121.231,54.676)
N1: (28.710,118.354,56.254)
O4: (27.362,114.589,56.327)
O2: (30.138,117.675,54.617)
C6: (27.666,118.024,57.091)
C5: (27.158,116.794,57.158)
O3': (27.910,122.684,54.768)
N3: (28.720,116.166,55.509)
OP1: (24.434,122.701,58.842)
OP2: (24.132,120.156,58.712)
C2: (29.253,117.418,55.405)
C1': (29.306,119.699,56.238)
C3': (27.916,121.467,55.505)
O5': (26.223,121.199,57.916)
O4': (28.861,120.423,57.366)
C5': (27.295,122.156,57.907)
P: (25.002,121.341,58.924)
C4': (28.362,121.713,56.939)
C2': (29.010,120.540,54.995)
O2': (30.196,121.231,54.676)
N1: (28.710,118.354,56.254)
O4: (27.362,114.589,56.327)
O2: (30.138,117.675,54.617)
C6: (27.666,118.024,57.091)
C5: (27.158,116.794,57.158)
O3': (27.910,122.684,54.768)
C4: (28.349,111.409,54.936)
N3: (28.710,112.713,54.628)
OP1: (31.815,106.346,50.590)
OP2: (30.225,106.860,52.535)
C2: (29.464,113.127,53.556)
C1': (30.667,112.462,51.502)
C3': (32.630,111.157,51.444)
O5': (31.148,108.704,51.164)
O4': (30.496,111.441,50.523)
C5': (31.593,109.354,49.964)
P: (30.730,107.168,51.173)
C4': (31.780,110.826,50.226)
C2': (32.168,112.571,51.766)
O2': (32.699,113.492,50.842)
N1: (29.881,112.103,52.695)
O4: (27.669,111.186,55.940)
O2: (29.739,114.299,53.385)
C6: (29.555,110.787,52.956)
C5: (28.827,110.418,54.014)
O3': (34.025,111.079,51.149)
N3: (28.710,112.713,54.628)
OP1: (31.815,106.346,50.590)
OP2: (30.225,106.860,52.535)
C2: (29.464,113.127,53.556)
C1': (30.667,112.462,51.502)
C3': (32.630,111.157,51.444)
O5': (31.148,108.704,51.164)
O4': (30.496,111.441,50.523)
C5': (31.593,109.354,49.964)
P: (30.730,107.168,51.173)
C4': (31.780,110.826,50.226)
C2': (32.168,112.571,51.766)
O2': (32.699,113.492,50.842)
N1: (29.881,112.103,52.695)
O4: (27.669,111.186,55.940)
O2: (29.739,114.299,53.385)
C6: (29.555,110.787,52.956)
C5: (28.827,110.418,54.014)
O3': (34.025,111.079,51.149)
Image (generated by PyMOL):