ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3Q3Z:A15:A48

Extra

PDB:
ATOM 1 O3' A A 14 -12.468 5.255 -28.149 1.00 49.60 O
ATOM 2 P U A 15 -12.673 4.936 -26.592 1.00 50.91 P
ATOM 3 OP1 U A 15 -11.350 5.071 -25.945 1.00 57.71 O
ATOM 4 OP2 U A 15 -13.448 3.684 -26.443 1.00 51.79 O
ATOM 5 O5' U A 15 -13.579 6.138 -26.075 1.00 54.31 O
ATOM 6 C5' U A 15 -13.017 7.434 -25.972 1.00 54.82 C
ATOM 7 C4' U A 15 -14.114 8.466 -25.842 1.00 57.08 C
ATOM 8 O4' U A 15 -15.049 8.348 -26.946 1.00 53.86 O
ATOM 9 C3' U A 15 -14.995 8.310 -24.619 1.00 58.43 C
ATOM 10 O3' U A 15 -14.358 8.814 -23.448 1.00 59.22 O
ATOM 11 C2' U A 15 -16.207 9.117 -25.051 1.00 54.90 C
ATOM 12 O2' U A 15 -16.002 10.514 -25.015 1.00 46.47 O
ATOM 13 C1' U A 15 -16.358 8.631 -26.484 1.00 53.19 C
ATOM 14 N1 U A 15 -17.229 7.414 -26.614 1.00 52.74 N
ATOM 15 C2 U A 15 -18.592 7.561 -26.473 1.00 49.80 C
ATOM 16 O2 U A 15 -19.128 8.626 -26.238 1.00 46.66 O
ATOM 17 N3 U A 15 -19.318 6.401 -26.611 1.00 57.78 N
ATOM 18 C4 U A 15 -18.826 5.133 -26.872 1.00 54.83 C
ATOM 19 O4 U A 15 -19.601 4.186 -26.972 1.00 59.20 O
ATOM 20 C5 U A 15 -17.397 5.057 -27.012 1.00 50.88 C
ATOM 21 C6 U A 15 -16.675 6.175 -26.882 1.00 49.42 C
ATOM 22 P G A 16 -14.558 8.066 -22.048 1.00 60.78 P
ATOM 23 OP1 G A 16 -13.564 8.641 -21.118 1.00 57.03 O
ATOM 24 OP2 G A 16 -14.609 6.600 -22.281 1.00 50.71 O
ATOM 25 O5' G A 16 -16.029 8.533 -21.614 1.00 57.98 O
TER

ATOM 1 O3' U B 47 -29.411 4.241 -26.449 1.00 63.13 O
ATOM 2 P U B 48 -29.383 4.810 -27.939 1.00 64.48 P
ATOM 3 OP1 U B 48 -30.686 5.473 -28.161 1.00 64.27 O
ATOM 4 OP2 U B 48 -28.897 3.759 -28.864 1.00 57.44 O
ATOM 5 O5' U B 48 -28.262 5.936 -27.856 1.00 55.19 O
ATOM 6 C5' U B 48 -28.479 7.068 -27.038 1.00 55.99 C
ATOM 7 C4' U B 48 -27.153 7.651 -26.614 1.00 55.00 C
ATOM 8 O4' U B 48 -26.326 6.595 -26.081 1.00 53.66 O
ATOM 9 C3' U B 48 -26.340 8.264 -27.742 1.00 51.43 C
ATOM 10 O3' U B 48 -26.688 9.636 -27.899 1.00 57.59 O
ATOM 11 C2' U B 48 -24.901 8.084 -27.277 1.00 50.12 C
ATOM 12 O2' U B 48 -24.405 9.222 -26.596 1.00 55.07 O
ATOM 13 C1' U B 48 -24.966 6.890 -26.325 1.00 50.89 C
ATOM 14 N1 U B 48 -24.257 5.661 -26.823 1.00 52.04 N
ATOM 15 C2 U B 48 -22.876 5.643 -26.798 1.00 51.65 C
ATOM 16 O2 U B 48 -22.193 6.568 -26.405 1.00 54.89 O
ATOM 17 N3 U B 48 -22.303 4.486 -27.254 1.00 55.05 N
ATOM 18 C4 U B 48 -22.949 3.366 -27.729 1.00 52.04 C
ATOM 19 O4 U B 48 -22.283 2.414 -28.115 1.00 55.40 O
ATOM 20 C5 U B 48 -24.387 3.448 -27.733 1.00 52.32 C
ATOM 21 C6 U B 48 -24.974 4.567 -27.285 1.00 53.04 C
ATOM 22 P G B 49 -27.019 10.241 -29.340 1.00 59.15 P
ATOM 23 OP1 G B 49 -27.533 11.611 -29.147 1.00 61.80 O
ATOM 24 OP2 G B 49 -27.817 9.245 -30.089 1.00 62.14 O
ATOM 25 O5' G B 49 -25.590 10.325 -30.025 1.00 57.36 O
TER

Atoms:
C4: (-18.826,5.133,-26.872)
N3: (-19.318,6.401,-26.611)
OP1: (-11.350,5.071,-25.945)
OP2: (-13.448,3.684,-26.443)
C2: (-18.592,7.561,-26.473)
C1': (-16.358,8.631,-26.484)
C3': (-14.995,8.310,-24.619)
O5': (-13.579,6.138,-26.075)
O4': (-15.049,8.348,-26.946)
C5': (-13.017,7.434,-25.972)
P: (-12.673,4.936,-26.592)
C4': (-14.114,8.466,-25.842)
C2': (-16.207,9.117,-25.051)
O2': (-16.002,10.514,-25.015)
N1: (-17.229,7.414,-26.614)
O4: (-19.601,4.186,-26.972)
O2: (-19.128,8.626,-26.238)
C6: (-16.675,6.175,-26.882)
C5: (-17.397,5.057,-27.012)
O3': (-14.358,8.814,-23.448)
C4: (-22.949,3.366,-27.729)
N3: (-22.303,4.486,-27.254)
OP1: (-30.686,5.473,-28.161)
OP2: (-28.897,3.759,-28.864)
C2: (-22.876,5.643,-26.798)
C1': (-24.966,6.890,-26.325)
C3': (-26.340,8.264,-27.742)
O5': (-28.262,5.936,-27.856)
O4': (-26.326,6.595,-26.081)
C5': (-28.479,7.068,-27.038)
P: (-29.383,4.810,-27.939)
C4': (-27.153,7.651,-26.614)
C2': (-24.901,8.084,-27.277)
O2': (-24.405,9.222,-26.596)
N1: (-24.257,5.661,-26.823)
O4: (-22.283,2.414,-28.115)
O2: (-22.193,6.568,-26.405)
C6: (-24.974,4.567,-27.285)
C5: (-24.387,3.448,-27.733)
O3': (-26.688,9.636,-27.899)
Image (generated by PyMOL):
PyMOL image
show in jmol