Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01263:01309
Extra
PDB:
ATOM 1 O3' C A1262 26.094 122.022 60.224 1.00 35.72 O
ATOM 2 P U A1263 25.501 121.973 58.736 1.00 36.80 P
ATOM 3 OP1 U A1263 24.815 123.274 58.526 1.00 37.47 O
ATOM 4 OP2 U A1263 24.758 120.706 58.521 1.00 34.68 O
ATOM 5 O5' U A1263 26.797 121.887 57.820 1.00 34.92 O
ATOM 6 C5' U A1263 27.784 122.930 57.825 1.00 31.31 C
ATOM 7 C4' U A1263 28.885 122.582 56.861 1.00 32.46 C
ATOM 8 O4' U A1263 29.493 121.341 57.296 1.00 31.83 O
ATOM 9 C3' U A1263 28.434 122.308 55.429 1.00 31.82 C
ATOM 10 O3' U A1263 28.389 123.523 54.678 1.00 34.15 O
ATOM 11 C2' U A1263 29.530 121.388 54.918 1.00 30.47 C
ATOM 12 O2' U A1263 30.690 122.113 54.575 1.00 30.05 O
ATOM 13 C1' U A1263 29.841 120.561 56.168 1.00 30.58 C
ATOM 14 N1 U A1263 29.152 119.264 56.273 1.00 29.88 N
ATOM 15 C2 U A1263 29.551 118.242 55.433 1.00 30.91 C
ATOM 16 O2 U A1263 30.414 118.377 54.580 1.00 32.99 O
ATOM 17 N3 U A1263 28.905 117.051 55.629 1.00 31.17 N
ATOM 18 C4 U A1263 27.928 116.783 56.556 1.00 31.71 C
ATOM 19 O4 U A1263 27.532 115.629 56.695 1.00 34.76 O
ATOM 20 C5 U A1263 27.552 117.893 57.363 1.00 31.44 C
ATOM 21 C6 U A1263 28.159 119.065 57.198 1.00 30.49 C
ATOM 22 P C A1264 27.065 123.923 53.862 1.00 31.61 P
ATOM 23 OP1 C A1264 27.122 125.382 53.614 1.00 29.93 O
ATOM 24 OP2 C A1264 25.892 123.354 54.565 1.00 35.62 O
ATOM 25 O5' C A1264 27.252 123.167 52.475 1.00 28.65 O
TER
ATOM 1 O3' G B1308 29.881 107.962 50.209 1.00 33.07 O
ATOM 2 P U B1309 31.104 108.004 51.248 1.00 33.17 P
ATOM 3 OP1 U B1309 32.194 107.181 50.671 1.00 31.75 O
ATOM 4 OP2 U B1309 30.587 107.688 52.601 1.00 33.47 O
ATOM 5 O5' U B1309 31.542 109.534 51.240 1.00 32.90 O
ATOM 6 C5' U B1309 31.963 110.170 50.023 1.00 34.39 C
ATOM 7 C4' U B1309 32.175 111.641 50.255 1.00 37.52 C
ATOM 8 O4' U B1309 30.913 112.289 50.566 1.00 37.66 O
ATOM 9 C3' U B1309 33.070 111.966 51.434 1.00 40.57 C
ATOM 10 O3' U B1309 34.439 111.829 51.041 1.00 43.11 O
ATOM 11 C2' U B1309 32.630 113.389 51.778 1.00 38.81 C
ATOM 12 O2' U B1309 33.146 114.354 50.886 1.00 38.89 O
ATOM 13 C1' U B1309 31.122 113.308 51.529 1.00 37.08 C
ATOM 14 N1 U B1309 30.312 112.988 52.714 1.00 39.28 N
ATOM 15 C2 U B1309 29.893 114.035 53.535 1.00 40.28 C
ATOM 16 O2 U B1309 30.175 115.195 53.328 1.00 41.85 O
ATOM 17 N3 U B1309 29.122 113.663 54.611 1.00 40.50 N
ATOM 18 C4 U B1309 28.726 112.378 54.948 1.00 42.26 C
ATOM 19 O4 U B1309 27.978 112.205 55.918 1.00 41.30 O
ATOM 20 C5 U B1309 29.203 111.353 54.060 1.00 42.34 C
ATOM 21 C6 U B1309 29.961 111.683 53.003 1.00 40.93 C
ATOM 22 P G B1310 35.518 111.165 52.047 1.00 48.39 P
ATOM 23 OP1 G B1310 36.703 110.841 51.214 1.00 47.44 O
ATOM 24 OP2 G B1310 34.903 110.099 52.888 1.00 46.41 O
ATOM 25 O5' G B1310 35.908 112.371 53.005 1.00 44.51 O
TER
ATOM 2 P U A1263 25.501 121.973 58.736 1.00 36.80 P
ATOM 3 OP1 U A1263 24.815 123.274 58.526 1.00 37.47 O
ATOM 4 OP2 U A1263 24.758 120.706 58.521 1.00 34.68 O
ATOM 5 O5' U A1263 26.797 121.887 57.820 1.00 34.92 O
ATOM 6 C5' U A1263 27.784 122.930 57.825 1.00 31.31 C
ATOM 7 C4' U A1263 28.885 122.582 56.861 1.00 32.46 C
ATOM 8 O4' U A1263 29.493 121.341 57.296 1.00 31.83 O
ATOM 9 C3' U A1263 28.434 122.308 55.429 1.00 31.82 C
ATOM 10 O3' U A1263 28.389 123.523 54.678 1.00 34.15 O
ATOM 11 C2' U A1263 29.530 121.388 54.918 1.00 30.47 C
ATOM 12 O2' U A1263 30.690 122.113 54.575 1.00 30.05 O
ATOM 13 C1' U A1263 29.841 120.561 56.168 1.00 30.58 C
ATOM 14 N1 U A1263 29.152 119.264 56.273 1.00 29.88 N
ATOM 15 C2 U A1263 29.551 118.242 55.433 1.00 30.91 C
ATOM 16 O2 U A1263 30.414 118.377 54.580 1.00 32.99 O
ATOM 17 N3 U A1263 28.905 117.051 55.629 1.00 31.17 N
ATOM 18 C4 U A1263 27.928 116.783 56.556 1.00 31.71 C
ATOM 19 O4 U A1263 27.532 115.629 56.695 1.00 34.76 O
ATOM 20 C5 U A1263 27.552 117.893 57.363 1.00 31.44 C
ATOM 21 C6 U A1263 28.159 119.065 57.198 1.00 30.49 C
ATOM 22 P C A1264 27.065 123.923 53.862 1.00 31.61 P
ATOM 23 OP1 C A1264 27.122 125.382 53.614 1.00 29.93 O
ATOM 24 OP2 C A1264 25.892 123.354 54.565 1.00 35.62 O
ATOM 25 O5' C A1264 27.252 123.167 52.475 1.00 28.65 O
TER
ATOM 1 O3' G B1308 29.881 107.962 50.209 1.00 33.07 O
ATOM 2 P U B1309 31.104 108.004 51.248 1.00 33.17 P
ATOM 3 OP1 U B1309 32.194 107.181 50.671 1.00 31.75 O
ATOM 4 OP2 U B1309 30.587 107.688 52.601 1.00 33.47 O
ATOM 5 O5' U B1309 31.542 109.534 51.240 1.00 32.90 O
ATOM 6 C5' U B1309 31.963 110.170 50.023 1.00 34.39 C
ATOM 7 C4' U B1309 32.175 111.641 50.255 1.00 37.52 C
ATOM 8 O4' U B1309 30.913 112.289 50.566 1.00 37.66 O
ATOM 9 C3' U B1309 33.070 111.966 51.434 1.00 40.57 C
ATOM 10 O3' U B1309 34.439 111.829 51.041 1.00 43.11 O
ATOM 11 C2' U B1309 32.630 113.389 51.778 1.00 38.81 C
ATOM 12 O2' U B1309 33.146 114.354 50.886 1.00 38.89 O
ATOM 13 C1' U B1309 31.122 113.308 51.529 1.00 37.08 C
ATOM 14 N1 U B1309 30.312 112.988 52.714 1.00 39.28 N
ATOM 15 C2 U B1309 29.893 114.035 53.535 1.00 40.28 C
ATOM 16 O2 U B1309 30.175 115.195 53.328 1.00 41.85 O
ATOM 17 N3 U B1309 29.122 113.663 54.611 1.00 40.50 N
ATOM 18 C4 U B1309 28.726 112.378 54.948 1.00 42.26 C
ATOM 19 O4 U B1309 27.978 112.205 55.918 1.00 41.30 O
ATOM 20 C5 U B1309 29.203 111.353 54.060 1.00 42.34 C
ATOM 21 C6 U B1309 29.961 111.683 53.003 1.00 40.93 C
ATOM 22 P G B1310 35.518 111.165 52.047 1.00 48.39 P
ATOM 23 OP1 G B1310 36.703 110.841 51.214 1.00 47.44 O
ATOM 24 OP2 G B1310 34.903 110.099 52.888 1.00 46.41 O
ATOM 25 O5' G B1310 35.908 112.371 53.005 1.00 44.51 O
TER
Atoms:
C4: (27.928,116.783,56.556)
N3: (28.905,117.051,55.629)
OP1: (24.815,123.274,58.526)
OP2: (24.758,120.706,58.521)
C2: (29.551,118.242,55.433)
C1': (29.841,120.561,56.168)
C3': (28.434,122.308,55.429)
O5': (26.797,121.887,57.820)
O4': (29.493,121.341,57.296)
C5': (27.784,122.930,57.825)
P: (25.501,121.973,58.736)
C4': (28.885,122.582,56.861)
C2': (29.530,121.388,54.918)
O2': (30.690,122.113,54.575)
N1: (29.152,119.264,56.273)
O4: (27.532,115.629,56.695)
O2: (30.414,118.377,54.580)
C6: (28.159,119.065,57.198)
C5: (27.552,117.893,57.363)
O3': (28.389,123.523,54.678)
N3: (28.905,117.051,55.629)
OP1: (24.815,123.274,58.526)
OP2: (24.758,120.706,58.521)
C2: (29.551,118.242,55.433)
C1': (29.841,120.561,56.168)
C3': (28.434,122.308,55.429)
O5': (26.797,121.887,57.820)
O4': (29.493,121.341,57.296)
C5': (27.784,122.930,57.825)
P: (25.501,121.973,58.736)
C4': (28.885,122.582,56.861)
C2': (29.530,121.388,54.918)
O2': (30.690,122.113,54.575)
N1: (29.152,119.264,56.273)
O4: (27.532,115.629,56.695)
O2: (30.414,118.377,54.580)
C6: (28.159,119.065,57.198)
C5: (27.552,117.893,57.363)
O3': (28.389,123.523,54.678)
C4: (28.726,112.378,54.948)
N3: (29.122,113.663,54.611)
OP1: (32.194,107.181,50.671)
OP2: (30.587,107.688,52.601)
C2: (29.893,114.035,53.535)
C1': (31.122,113.308,51.529)
C3': (33.070,111.966,51.434)
O5': (31.542,109.534,51.240)
O4': (30.913,112.289,50.566)
C5': (31.963,110.170,50.023)
P: (31.104,108.004,51.248)
C4': (32.175,111.641,50.255)
C2': (32.630,113.389,51.778)
O2': (33.146,114.354,50.886)
N1: (30.312,112.988,52.714)
O4: (27.978,112.205,55.918)
O2: (30.175,115.195,53.328)
C6: (29.961,111.683,53.003)
C5: (29.203,111.353,54.060)
O3': (34.439,111.829,51.041)
N3: (29.122,113.663,54.611)
OP1: (32.194,107.181,50.671)
OP2: (30.587,107.688,52.601)
C2: (29.893,114.035,53.535)
C1': (31.122,113.308,51.529)
C3': (33.070,111.966,51.434)
O5': (31.542,109.534,51.240)
O4': (30.913,112.289,50.566)
C5': (31.963,110.170,50.023)
P: (31.104,108.004,51.248)
C4': (32.175,111.641,50.255)
C2': (32.630,113.389,51.778)
O2': (33.146,114.354,50.886)
N1: (30.312,112.988,52.714)
O4: (27.978,112.205,55.918)
O2: (30.175,115.195,53.328)
C6: (29.961,111.683,53.003)
C5: (29.203,111.353,54.060)
O3': (34.439,111.829,51.041)
Image (generated by PyMOL):