ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1183:1227

Extra

PDB:
ATOM 1 O3' C A 182 104.540 -2.943 121.598 1.00 72.04 O
ATOM 2 P U A 183 104.601 -2.720 120.003 1.00 67.24 P
ATOM 3 OP1 U A 183 105.468 -1.563 119.740 1.00 67.46 O
ATOM 4 OP2 U A 183 103.220 -2.660 119.532 1.00 66.62 O
ATOM 5 O5' U A 183 105.308 -4.058 119.502 1.00 67.23 O
ATOM 6 C5' U A 183 106.510 -4.515 120.124 1.00 67.86 C
ATOM 7 C4' U A 183 106.759 -5.983 119.884 1.00 67.82 C
ATOM 8 O4' U A 183 105.671 -6.754 120.442 1.00 67.67 O
ATOM 9 C3' U A 183 106.833 -6.424 118.434 1.00 67.28 C
ATOM 10 O3' U A 183 108.108 -6.237 117.869 1.00 67.49 O
ATOM 11 C2' U A 183 106.420 -7.890 118.498 1.00 67.16 C
ATOM 12 O2' U A 183 107.520 -8.704 118.841 1.00 67.66 O
ATOM 13 C1' U A 183 105.434 -7.900 119.663 1.00 67.28 C
ATOM 14 N1 U A 183 104.051 -7.859 119.210 1.00 66.66 N
ATOM 15 C2 U A 183 103.540 -8.972 118.557 1.00 66.25 C
ATOM 16 O2 U A 183 104.193 -9.977 118.322 1.00 66.38 O
ATOM 17 N3 U A 183 102.224 -8.850 118.173 1.00 65.69 N
ATOM 18 C4 U A 183 101.421 -7.737 118.395 1.00 65.52 C
ATOM 19 O4 U A 183 100.259 -7.771 117.998 1.00 65.02 O
ATOM 20 C5 U A 183 102.028 -6.632 119.104 1.00 65.99 C
ATOM 21 C6 U A 183 103.301 -6.739 119.474 1.00 66.53 C
ATOM 22 P A A 184 108.425 -4.965 116.935 1.00 60.89 P
ATOM 23 OP1 A A 184 109.652 -4.298 117.500 1.00 61.54 O
ATOM 24 OP2 A A 184 107.188 -4.171 116.808 1.00 60.45 O
ATOM 25 O5' A A 184 108.774 -5.641 115.546 1.00 60.48 O
TER

ATOM 1 O3' G B 226 100.135 -15.928 111.252 1.00 51.56 O
ATOM 2 P U B 227 99.757 -16.564 112.666 1.00 59.89 P
ATOM 3 OP1 U B 227 99.274 -17.945 112.416 1.00 59.75 O
ATOM 4 OP2 U B 227 98.871 -15.595 113.349 1.00 59.82 O
ATOM 5 O5' U B 227 101.132 -16.604 113.407 1.00 60.56 O
ATOM 6 C5' U B 227 102.199 -17.363 112.918 1.00 60.77 C
ATOM 7 C4' U B 227 103.355 -17.187 113.817 1.00 61.43 C
ATOM 8 O4' U B 227 103.746 -15.797 113.797 1.00 61.47 O
ATOM 9 C3' U B 227 103.046 -17.433 115.273 1.00 61.86 C
ATOM 10 O3' U B 227 103.058 -18.784 115.615 1.00 62.07 O
ATOM 11 C2' U B 227 104.099 -16.627 115.990 1.00 62.41 C
ATOM 12 O2' U B 227 105.339 -17.316 115.977 1.00 62.84 O
ATOM 13 C1' U B 227 104.203 -15.411 115.081 1.00 62.05 C
ATOM 14 N1 U B 227 103.373 -14.293 115.561 1.00 61.91 N
ATOM 15 C2 U B 227 104.008 -13.332 116.334 1.00 62.36 C
ATOM 16 O2 U B 227 105.170 -13.364 116.640 1.00 62.85 O
ATOM 17 N3 U B 227 103.236 -12.295 116.731 1.00 62.23 N
ATOM 18 C4 U B 227 101.909 -12.149 116.419 1.00 61.69 C
ATOM 19 O4 U B 227 101.338 -11.164 116.860 1.00 61.66 O
ATOM 20 C5 U B 227 101.335 -13.169 115.617 1.00 61.26 C
ATOM 21 C6 U B 227 102.061 -14.188 115.208 1.00 61.37 C
ATOM 22 P G B 228 102.359 -19.220 116.947 1.00 85.53 P
ATOM 23 OP1 G B 228 102.139 -20.661 116.853 1.00 85.53 O
ATOM 24 OP2 G B 228 101.205 -18.317 117.157 1.00 85.19 O
ATOM 25 O5' G B 228 103.455 -18.905 118.029 1.00 86.26 O
TER

Atoms:
C4: (101.421,-7.737,118.395)
N3: (102.224,-8.850,118.173)
OP1: (105.468,-1.563,119.740)
OP2: (103.220,-2.660,119.532)
C2: (103.540,-8.972,118.557)
C1': (105.434,-7.900,119.663)
C3': (106.833,-6.424,118.434)
O5': (105.308,-4.058,119.502)
O4': (105.671,-6.754,120.442)
C5': (106.510,-4.515,120.124)
P: (104.601,-2.720,120.003)
C4': (106.759,-5.983,119.884)
C2': (106.420,-7.890,118.498)
O2': (107.520,-8.704,118.841)
N1: (104.051,-7.859,119.210)
O4: (100.259,-7.771,117.998)
O2: (104.193,-9.977,118.322)
C6: (103.301,-6.739,119.474)
C5: (102.028,-6.632,119.104)
O3': (108.108,-6.237,117.869)
C4: (101.909,-12.149,116.419)
N3: (103.236,-12.295,116.731)
OP1: (99.274,-17.945,112.416)
OP2: (98.871,-15.595,113.349)
C2: (104.008,-13.332,116.334)
C1': (104.203,-15.411,115.081)
C3': (103.046,-17.433,115.273)
O5': (101.132,-16.604,113.407)
O4': (103.746,-15.797,113.797)
C5': (102.199,-17.363,112.918)
P: (99.757,-16.564,112.666)
C4': (103.355,-17.187,113.817)
C2': (104.099,-16.627,115.990)
O2': (105.339,-17.316,115.977)
N1: (103.373,-14.293,115.561)
O4: (101.338,-11.164,116.860)
O2: (105.170,-13.364,116.640)
C6: (102.061,-14.188,115.208)
C5: (101.335,-13.169,115.617)
O3': (103.058,-18.784,115.615)
Image (generated by PyMOL):
PyMOL image
show in jmol