Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13053:13065
Extra
PDB:
ATOM 1 O3' U A3052 50.020 64.246 66.203 1.00 60.01 O
ATOM 2 P U A3053 48.602 63.478 66.230 1.00 64.41 P
ATOM 3 OP1 U A3053 47.950 63.836 67.521 1.00 64.62 O
ATOM 4 OP2 U A3053 48.856 62.040 65.933 1.00 63.76 O
ATOM 5 O5' U A3053 47.812 64.129 65.014 1.00 64.67 O
ATOM 6 C5' U A3053 47.639 65.527 64.928 1.00 65.31 C
ATOM 7 C4' U A3053 47.405 65.954 63.509 1.00 65.48 C
ATOM 8 O4' U A3053 48.507 65.514 62.674 1.00 65.26 O
ATOM 9 C3' U A3053 46.197 65.352 62.835 1.00 65.20 C
ATOM 10 O3' U A3053 44.983 65.954 63.232 1.00 65.51 O
ATOM 11 C2' U A3053 46.533 65.524 61.357 1.00 65.27 C
ATOM 12 O2' U A3053 46.304 66.854 60.940 1.00 65.89 O
ATOM 13 C1' U A3053 48.044 65.271 61.364 1.00 65.14 C
ATOM 14 N1 U A3053 48.377 63.887 61.009 1.00 64.51 N
ATOM 15 C2 U A3053 48.258 63.470 59.717 1.00 64.32 C
ATOM 16 O2 U A3053 47.893 64.138 58.820 1.00 64.64 O
ATOM 17 N3 U A3053 48.574 62.198 59.460 1.00 63.76 N
ATOM 18 C4 U A3053 48.994 61.292 60.384 1.00 63.35 C
ATOM 19 O4 U A3053 49.238 60.177 59.980 1.00 62.88 O
ATOM 20 C5 U A3053 49.093 61.758 61.729 1.00 63.56 C
ATOM 21 C6 U A3053 48.798 63.035 61.987 1.00 64.13 C
ATOM 22 P U A3054 43.644 65.075 63.342 1.00 62.57 P
ATOM 23 OP1 U A3054 42.699 65.851 64.173 1.00 62.97 O
ATOM 24 OP2 U A3054 44.019 63.714 63.776 1.00 61.95 O
ATOM 25 O5' U A3054 43.130 65.042 61.848 1.00 62.56 O
TER
ATOM 1 O3' U B3064 43.740 60.919 48.752 1.00 58.42 O
ATOM 2 P U B3065 44.855 61.952 48.194 1.00 56.21 P
ATOM 3 OP1 U B3065 44.440 62.275 46.794 1.00 56.49 O
ATOM 4 OP2 U B3065 46.230 61.371 48.441 1.00 55.91 O
ATOM 5 O5' U B3065 44.648 63.214 49.132 1.00 56.70 O
ATOM 6 C5' U B3065 45.437 63.403 50.281 1.00 56.68 C
ATOM 7 C4' U B3065 44.773 64.345 51.240 1.00 57.06 C
ATOM 8 O4' U B3065 44.442 63.621 52.434 1.00 56.67 O
ATOM 9 C3' U B3065 45.631 65.481 51.737 1.00 57.52 C
ATOM 10 O3' U B3065 45.651 66.594 50.877 1.00 58.09 O
ATOM 11 C2' U B3065 45.074 65.776 53.120 1.00 57.60 C
ATOM 12 O2' U B3065 43.890 66.526 53.026 1.00 57.98 O
ATOM 13 C1' U B3065 44.702 64.395 53.577 1.00 56.95 C
ATOM 14 N1 U B3065 45.756 63.721 54.347 1.00 56.59 N
ATOM 15 C2 U B3065 45.983 64.096 55.639 1.00 56.70 C
ATOM 16 O2 U B3065 45.446 65.052 56.155 1.00 57.13 O
ATOM 17 N3 U B3065 46.917 63.357 56.302 1.00 56.33 N
ATOM 18 C4 U B3065 47.615 62.285 55.838 1.00 55.86 C
ATOM 19 O4 U B3065 48.405 61.721 56.601 1.00 55.59 O
ATOM 20 C5 U B3065 47.308 61.937 54.488 1.00 55.76 C
ATOM 21 C6 U B3065 46.404 62.637 53.809 1.00 56.12 C
ATOM 22 P A B3066 46.963 67.504 50.845 1.00 55.00 P
ATOM 23 OP1 A B3066 46.681 68.654 49.997 1.00 55.60 O
ATOM 24 OP2 A B3066 48.097 66.619 50.503 1.00 54.59 O
ATOM 25 O5' A B3066 47.086 67.978 52.334 1.00 55.13 O
TER
ATOM 2 P U A3053 48.602 63.478 66.230 1.00 64.41 P
ATOM 3 OP1 U A3053 47.950 63.836 67.521 1.00 64.62 O
ATOM 4 OP2 U A3053 48.856 62.040 65.933 1.00 63.76 O
ATOM 5 O5' U A3053 47.812 64.129 65.014 1.00 64.67 O
ATOM 6 C5' U A3053 47.639 65.527 64.928 1.00 65.31 C
ATOM 7 C4' U A3053 47.405 65.954 63.509 1.00 65.48 C
ATOM 8 O4' U A3053 48.507 65.514 62.674 1.00 65.26 O
ATOM 9 C3' U A3053 46.197 65.352 62.835 1.00 65.20 C
ATOM 10 O3' U A3053 44.983 65.954 63.232 1.00 65.51 O
ATOM 11 C2' U A3053 46.533 65.524 61.357 1.00 65.27 C
ATOM 12 O2' U A3053 46.304 66.854 60.940 1.00 65.89 O
ATOM 13 C1' U A3053 48.044 65.271 61.364 1.00 65.14 C
ATOM 14 N1 U A3053 48.377 63.887 61.009 1.00 64.51 N
ATOM 15 C2 U A3053 48.258 63.470 59.717 1.00 64.32 C
ATOM 16 O2 U A3053 47.893 64.138 58.820 1.00 64.64 O
ATOM 17 N3 U A3053 48.574 62.198 59.460 1.00 63.76 N
ATOM 18 C4 U A3053 48.994 61.292 60.384 1.00 63.35 C
ATOM 19 O4 U A3053 49.238 60.177 59.980 1.00 62.88 O
ATOM 20 C5 U A3053 49.093 61.758 61.729 1.00 63.56 C
ATOM 21 C6 U A3053 48.798 63.035 61.987 1.00 64.13 C
ATOM 22 P U A3054 43.644 65.075 63.342 1.00 62.57 P
ATOM 23 OP1 U A3054 42.699 65.851 64.173 1.00 62.97 O
ATOM 24 OP2 U A3054 44.019 63.714 63.776 1.00 61.95 O
ATOM 25 O5' U A3054 43.130 65.042 61.848 1.00 62.56 O
TER
ATOM 1 O3' U B3064 43.740 60.919 48.752 1.00 58.42 O
ATOM 2 P U B3065 44.855 61.952 48.194 1.00 56.21 P
ATOM 3 OP1 U B3065 44.440 62.275 46.794 1.00 56.49 O
ATOM 4 OP2 U B3065 46.230 61.371 48.441 1.00 55.91 O
ATOM 5 O5' U B3065 44.648 63.214 49.132 1.00 56.70 O
ATOM 6 C5' U B3065 45.437 63.403 50.281 1.00 56.68 C
ATOM 7 C4' U B3065 44.773 64.345 51.240 1.00 57.06 C
ATOM 8 O4' U B3065 44.442 63.621 52.434 1.00 56.67 O
ATOM 9 C3' U B3065 45.631 65.481 51.737 1.00 57.52 C
ATOM 10 O3' U B3065 45.651 66.594 50.877 1.00 58.09 O
ATOM 11 C2' U B3065 45.074 65.776 53.120 1.00 57.60 C
ATOM 12 O2' U B3065 43.890 66.526 53.026 1.00 57.98 O
ATOM 13 C1' U B3065 44.702 64.395 53.577 1.00 56.95 C
ATOM 14 N1 U B3065 45.756 63.721 54.347 1.00 56.59 N
ATOM 15 C2 U B3065 45.983 64.096 55.639 1.00 56.70 C
ATOM 16 O2 U B3065 45.446 65.052 56.155 1.00 57.13 O
ATOM 17 N3 U B3065 46.917 63.357 56.302 1.00 56.33 N
ATOM 18 C4 U B3065 47.615 62.285 55.838 1.00 55.86 C
ATOM 19 O4 U B3065 48.405 61.721 56.601 1.00 55.59 O
ATOM 20 C5 U B3065 47.308 61.937 54.488 1.00 55.76 C
ATOM 21 C6 U B3065 46.404 62.637 53.809 1.00 56.12 C
ATOM 22 P A B3066 46.963 67.504 50.845 1.00 55.00 P
ATOM 23 OP1 A B3066 46.681 68.654 49.997 1.00 55.60 O
ATOM 24 OP2 A B3066 48.097 66.619 50.503 1.00 54.59 O
ATOM 25 O5' A B3066 47.086 67.978 52.334 1.00 55.13 O
TER
Atoms:
C4: (48.994,61.292,60.384)
N3: (48.574,62.198,59.460)
OP1: (47.950,63.836,67.521)
OP2: (48.856,62.040,65.933)
C2: (48.258,63.470,59.717)
C1': (48.044,65.271,61.364)
C3': (46.197,65.352,62.835)
O5': (47.812,64.129,65.014)
O4': (48.507,65.514,62.674)
C5': (47.639,65.527,64.928)
P: (48.602,63.478,66.230)
C4': (47.405,65.954,63.509)
C2': (46.533,65.524,61.357)
O2': (46.304,66.854,60.940)
N1: (48.377,63.887,61.009)
O4: (49.238,60.177,59.980)
O2: (47.893,64.138,58.820)
C6: (48.798,63.035,61.987)
C5: (49.093,61.758,61.729)
O3': (44.983,65.954,63.232)
N3: (48.574,62.198,59.460)
OP1: (47.950,63.836,67.521)
OP2: (48.856,62.040,65.933)
C2: (48.258,63.470,59.717)
C1': (48.044,65.271,61.364)
C3': (46.197,65.352,62.835)
O5': (47.812,64.129,65.014)
O4': (48.507,65.514,62.674)
C5': (47.639,65.527,64.928)
P: (48.602,63.478,66.230)
C4': (47.405,65.954,63.509)
C2': (46.533,65.524,61.357)
O2': (46.304,66.854,60.940)
N1: (48.377,63.887,61.009)
O4: (49.238,60.177,59.980)
O2: (47.893,64.138,58.820)
C6: (48.798,63.035,61.987)
C5: (49.093,61.758,61.729)
O3': (44.983,65.954,63.232)
C4: (47.615,62.285,55.838)
N3: (46.917,63.357,56.302)
OP1: (44.440,62.275,46.794)
OP2: (46.230,61.371,48.441)
C2: (45.983,64.096,55.639)
C1': (44.702,64.395,53.577)
C3': (45.631,65.481,51.737)
O5': (44.648,63.214,49.132)
O4': (44.442,63.621,52.434)
C5': (45.437,63.403,50.281)
P: (44.855,61.952,48.194)
C4': (44.773,64.345,51.240)
C2': (45.074,65.776,53.120)
O2': (43.890,66.526,53.026)
N1: (45.756,63.721,54.347)
O4: (48.405,61.721,56.601)
O2: (45.446,65.052,56.155)
C6: (46.404,62.637,53.809)
C5: (47.308,61.937,54.488)
O3': (45.651,66.594,50.877)
N3: (46.917,63.357,56.302)
OP1: (44.440,62.275,46.794)
OP2: (46.230,61.371,48.441)
C2: (45.983,64.096,55.639)
C1': (44.702,64.395,53.577)
C3': (45.631,65.481,51.737)
O5': (44.648,63.214,49.132)
O4': (44.442,63.621,52.434)
C5': (45.437,63.403,50.281)
P: (44.855,61.952,48.194)
C4': (44.773,64.345,51.240)
C2': (45.074,65.776,53.120)
O2': (43.890,66.526,53.026)
N1: (45.756,63.721,54.347)
O4: (48.405,61.721,56.601)
O2: (45.446,65.052,56.155)
C6: (46.404,62.637,53.809)
C5: (47.308,61.937,54.488)
O3': (45.651,66.594,50.877)
Image (generated by PyMOL):