Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:968:9111
Extra
PDB:
ATOM 1 O3' G A 67 59.930 46.134 116.623 1.00 58.05 O
ATOM 2 P U A 68 58.436 46.747 116.672 1.00 57.14 P
ATOM 3 OP1 U A 68 58.521 48.161 116.259 1.00 57.32 O
ATOM 4 OP2 U A 68 57.824 46.405 117.980 1.00 56.59 O
ATOM 5 O5' U A 68 57.639 45.965 115.532 1.00 56.63 O
ATOM 6 C5' U A 68 58.069 46.008 114.159 1.00 55.16 C
ATOM 7 C4' U A 68 57.211 45.099 113.315 1.00 55.74 C
ATOM 8 O4' U A 68 57.269 43.750 113.848 1.00 56.99 O
ATOM 9 C3' U A 68 55.731 45.420 113.332 1.00 57.04 C
ATOM 10 O3' U A 68 55.400 46.468 112.446 1.00 57.41 O
ATOM 11 C2' U A 68 55.099 44.091 112.941 1.00 58.08 C
ATOM 12 O2' U A 68 55.132 43.814 111.555 1.00 55.34 O
ATOM 13 C1' U A 68 56.005 43.113 113.688 1.00 58.69 C
ATOM 14 N1 U A 68 55.475 42.755 115.018 1.00 60.82 N
ATOM 15 C2 U A 68 54.439 41.830 115.074 1.00 61.04 C
ATOM 16 O2 U A 68 53.953 41.315 114.079 1.00 60.40 O
ATOM 17 N3 U A 68 53.993 41.532 116.339 1.00 61.32 N
ATOM 18 C4 U A 68 54.459 42.048 117.530 1.00 62.14 C
ATOM 19 O4 U A 68 53.962 41.667 118.592 1.00 63.79 O
ATOM 20 C5 U A 68 55.522 42.996 117.393 1.00 61.70 C
ATOM 21 C6 U A 68 55.982 43.311 116.176 1.00 61.55 C
ATOM 22 P U A 69 54.060 47.307 112.690 1.00 56.77 P
ATOM 23 OP1 U A 69 54.020 48.347 111.639 1.00 56.57 O
ATOM 24 OP2 U A 69 54.020 47.707 114.116 1.00 54.98 O
ATOM 25 O5' U A 69 52.902 46.247 112.413 1.00 58.19 O
TER
ATOM 1 O3' U B 110 45.349 35.784 117.815 1.00 68.92 O
ATOM 2 P U B 111 46.265 34.483 117.676 1.00 67.07 P
ATOM 3 OP1 U B 111 45.508 33.481 116.876 1.00 65.70 O
ATOM 4 OP2 U B 111 46.746 34.134 119.027 1.00 67.27 O
ATOM 5 O5' U B 111 47.502 34.993 116.816 1.00 66.28 O
ATOM 6 C5' U B 111 47.308 35.506 115.485 1.00 62.40 C
ATOM 7 C4' U B 111 48.582 36.116 114.969 1.00 59.69 C
ATOM 8 O4' U B 111 48.918 37.275 115.763 1.00 58.92 O
ATOM 9 C3' U B 111 49.818 35.256 115.126 1.00 59.04 C
ATOM 10 O3' U B 111 49.874 34.269 114.108 1.00 58.28 O
ATOM 11 C2' U B 111 50.939 36.281 114.993 1.00 59.00 C
ATOM 12 O2' U B 111 51.220 36.585 113.645 1.00 58.94 O
ATOM 13 C1' U B 111 50.307 37.518 115.643 1.00 59.75 C
ATOM 14 N1 U B 111 50.847 37.908 116.957 1.00 60.86 N
ATOM 15 C2 U B 111 51.652 39.032 117.014 1.00 61.35 C
ATOM 16 O2 U B 111 51.915 39.710 116.049 1.00 63.57 O
ATOM 17 N3 U B 111 52.138 39.336 118.253 1.00 62.06 N
ATOM 18 C4 U B 111 51.909 38.656 119.421 1.00 63.03 C
ATOM 19 O4 U B 111 52.465 39.031 120.459 1.00 64.83 O
ATOM 20 C5 U B 111 51.055 37.518 119.288 1.00 61.73 C
ATOM 21 C6 U B 111 50.568 37.190 118.090 1.00 60.41 C
ATOM 22 P C B 112 50.354 32.784 114.472 1.00 59.91 P
ATOM 23 OP1 C B 112 50.337 31.978 113.229 1.00 59.20 O
ATOM 24 OP2 C B 112 49.591 32.323 115.657 1.00 58.98 O
ATOM 25 O5' C B 112 51.878 32.968 114.881 1.00 58.91 O
TER
ATOM 2 P U A 68 58.436 46.747 116.672 1.00 57.14 P
ATOM 3 OP1 U A 68 58.521 48.161 116.259 1.00 57.32 O
ATOM 4 OP2 U A 68 57.824 46.405 117.980 1.00 56.59 O
ATOM 5 O5' U A 68 57.639 45.965 115.532 1.00 56.63 O
ATOM 6 C5' U A 68 58.069 46.008 114.159 1.00 55.16 C
ATOM 7 C4' U A 68 57.211 45.099 113.315 1.00 55.74 C
ATOM 8 O4' U A 68 57.269 43.750 113.848 1.00 56.99 O
ATOM 9 C3' U A 68 55.731 45.420 113.332 1.00 57.04 C
ATOM 10 O3' U A 68 55.400 46.468 112.446 1.00 57.41 O
ATOM 11 C2' U A 68 55.099 44.091 112.941 1.00 58.08 C
ATOM 12 O2' U A 68 55.132 43.814 111.555 1.00 55.34 O
ATOM 13 C1' U A 68 56.005 43.113 113.688 1.00 58.69 C
ATOM 14 N1 U A 68 55.475 42.755 115.018 1.00 60.82 N
ATOM 15 C2 U A 68 54.439 41.830 115.074 1.00 61.04 C
ATOM 16 O2 U A 68 53.953 41.315 114.079 1.00 60.40 O
ATOM 17 N3 U A 68 53.993 41.532 116.339 1.00 61.32 N
ATOM 18 C4 U A 68 54.459 42.048 117.530 1.00 62.14 C
ATOM 19 O4 U A 68 53.962 41.667 118.592 1.00 63.79 O
ATOM 20 C5 U A 68 55.522 42.996 117.393 1.00 61.70 C
ATOM 21 C6 U A 68 55.982 43.311 116.176 1.00 61.55 C
ATOM 22 P U A 69 54.060 47.307 112.690 1.00 56.77 P
ATOM 23 OP1 U A 69 54.020 48.347 111.639 1.00 56.57 O
ATOM 24 OP2 U A 69 54.020 47.707 114.116 1.00 54.98 O
ATOM 25 O5' U A 69 52.902 46.247 112.413 1.00 58.19 O
TER
ATOM 1 O3' U B 110 45.349 35.784 117.815 1.00 68.92 O
ATOM 2 P U B 111 46.265 34.483 117.676 1.00 67.07 P
ATOM 3 OP1 U B 111 45.508 33.481 116.876 1.00 65.70 O
ATOM 4 OP2 U B 111 46.746 34.134 119.027 1.00 67.27 O
ATOM 5 O5' U B 111 47.502 34.993 116.816 1.00 66.28 O
ATOM 6 C5' U B 111 47.308 35.506 115.485 1.00 62.40 C
ATOM 7 C4' U B 111 48.582 36.116 114.969 1.00 59.69 C
ATOM 8 O4' U B 111 48.918 37.275 115.763 1.00 58.92 O
ATOM 9 C3' U B 111 49.818 35.256 115.126 1.00 59.04 C
ATOM 10 O3' U B 111 49.874 34.269 114.108 1.00 58.28 O
ATOM 11 C2' U B 111 50.939 36.281 114.993 1.00 59.00 C
ATOM 12 O2' U B 111 51.220 36.585 113.645 1.00 58.94 O
ATOM 13 C1' U B 111 50.307 37.518 115.643 1.00 59.75 C
ATOM 14 N1 U B 111 50.847 37.908 116.957 1.00 60.86 N
ATOM 15 C2 U B 111 51.652 39.032 117.014 1.00 61.35 C
ATOM 16 O2 U B 111 51.915 39.710 116.049 1.00 63.57 O
ATOM 17 N3 U B 111 52.138 39.336 118.253 1.00 62.06 N
ATOM 18 C4 U B 111 51.909 38.656 119.421 1.00 63.03 C
ATOM 19 O4 U B 111 52.465 39.031 120.459 1.00 64.83 O
ATOM 20 C5 U B 111 51.055 37.518 119.288 1.00 61.73 C
ATOM 21 C6 U B 111 50.568 37.190 118.090 1.00 60.41 C
ATOM 22 P C B 112 50.354 32.784 114.472 1.00 59.91 P
ATOM 23 OP1 C B 112 50.337 31.978 113.229 1.00 59.20 O
ATOM 24 OP2 C B 112 49.591 32.323 115.657 1.00 58.98 O
ATOM 25 O5' C B 112 51.878 32.968 114.881 1.00 58.91 O
TER
Atoms:
C4: (54.459,42.048,117.530)
N3: (53.993,41.532,116.339)
OP1: (58.521,48.161,116.259)
OP2: (57.824,46.405,117.980)
C2: (54.439,41.830,115.074)
C1': (56.005,43.113,113.688)
C3': (55.731,45.420,113.332)
O5': (57.639,45.965,115.532)
O4': (57.269,43.750,113.848)
C5': (58.069,46.008,114.159)
P: (58.436,46.747,116.672)
C4': (57.211,45.099,113.315)
C2': (55.099,44.091,112.941)
O2': (55.132,43.814,111.555)
N1: (55.475,42.755,115.018)
O4: (53.962,41.667,118.592)
O2: (53.953,41.315,114.079)
C6: (55.982,43.311,116.176)
C5: (55.522,42.996,117.393)
O3': (55.400,46.468,112.446)
N3: (53.993,41.532,116.339)
OP1: (58.521,48.161,116.259)
OP2: (57.824,46.405,117.980)
C2: (54.439,41.830,115.074)
C1': (56.005,43.113,113.688)
C3': (55.731,45.420,113.332)
O5': (57.639,45.965,115.532)
O4': (57.269,43.750,113.848)
C5': (58.069,46.008,114.159)
P: (58.436,46.747,116.672)
C4': (57.211,45.099,113.315)
C2': (55.099,44.091,112.941)
O2': (55.132,43.814,111.555)
N1: (55.475,42.755,115.018)
O4: (53.962,41.667,118.592)
O2: (53.953,41.315,114.079)
C6: (55.982,43.311,116.176)
C5: (55.522,42.996,117.393)
O3': (55.400,46.468,112.446)
C4: (51.909,38.656,119.421)
N3: (52.138,39.336,118.253)
OP1: (45.508,33.481,116.876)
OP2: (46.746,34.134,119.027)
C2: (51.652,39.032,117.014)
C1': (50.307,37.518,115.643)
C3': (49.818,35.256,115.126)
O5': (47.502,34.993,116.816)
O4': (48.918,37.275,115.763)
C5': (47.308,35.506,115.485)
P: (46.265,34.483,117.676)
C4': (48.582,36.116,114.969)
C2': (50.939,36.281,114.993)
O2': (51.220,36.585,113.645)
N1: (50.847,37.908,116.957)
O4: (52.465,39.031,120.459)
O2: (51.915,39.710,116.049)
C6: (50.568,37.190,118.090)
C5: (51.055,37.518,119.288)
O3': (49.874,34.269,114.108)
N3: (52.138,39.336,118.253)
OP1: (45.508,33.481,116.876)
OP2: (46.746,34.134,119.027)
C2: (51.652,39.032,117.014)
C1': (50.307,37.518,115.643)
C3': (49.818,35.256,115.126)
O5': (47.502,34.993,116.816)
O4': (48.918,37.275,115.763)
C5': (47.308,35.506,115.485)
P: (46.265,34.483,117.676)
C4': (48.582,36.116,114.969)
C2': (50.939,36.281,114.993)
O2': (51.220,36.585,113.645)
N1: (50.847,37.908,116.957)
O4: (52.465,39.031,120.459)
O2: (51.915,39.710,116.049)
C6: (50.568,37.190,118.090)
C5: (51.055,37.518,119.288)
O3': (49.874,34.269,114.108)
Image (generated by PyMOL):