Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01923:01930
Extra
PDB:
ATOM 1 O3' G A1922 105.905 122.066 110.366 1.00 55.14 O
ATOM 2 P U A1923 105.358 121.934 111.871 1.00 57.70 P
ATOM 3 OP1 U A1923 104.389 123.036 112.120 1.00 56.51 O
ATOM 4 OP2 U A1923 106.540 121.784 112.763 1.00 60.16 O
ATOM 5 O5' U A1923 104.548 120.561 111.881 1.00 56.13 O
ATOM 6 C5' U A1923 103.727 120.184 110.759 1.00 54.94 C
ATOM 7 C4' U A1923 102.282 120.006 111.174 1.00 52.45 C
ATOM 8 O4' U A1923 102.093 118.721 111.822 1.00 50.95 O
ATOM 9 C3' U A1923 101.674 121.058 112.096 1.00 51.46 C
ATOM 10 O3' U A1923 100.348 121.330 111.677 1.00 52.32 O
ATOM 11 C2' U A1923 101.656 120.345 113.447 1.00 52.14 C
ATOM 12 O2' U A1923 100.630 120.789 114.313 1.00 52.50 O
ATOM 13 C1' U A1923 101.388 118.903 113.028 1.00 51.78 C
ATOM 14 N1 U A1923 101.843 117.892 113.995 1.00 53.57 N
ATOM 15 C2 U A1923 100.879 117.109 114.608 1.00 54.95 C
ATOM 16 O2 U A1923 99.683 117.232 114.396 1.00 56.37 O
ATOM 17 N3 U A1923 101.364 116.173 115.484 1.00 55.52 N
ATOM 18 C4 U A1923 102.683 115.942 115.808 1.00 56.31 C
ATOM 19 O4 U A1923 102.962 115.024 116.588 1.00 58.19 O
ATOM 20 C5 U A1923 103.620 116.797 115.144 1.00 54.97 C
ATOM 21 C6 U A1923 103.180 117.717 114.282 1.00 54.04 C
ATOM 22 P A A1924 99.958 122.805 111.167 1.00 53.27 P
ATOM 23 OP1 A A1924 100.412 123.772 112.203 1.00 53.52 O
ATOM 24 OP2 A A1924 98.527 122.788 110.760 1.00 54.40 O
ATOM 25 O5' A A1924 100.837 123.011 109.853 1.00 51.41 O
TER
ATOM 1 O3' C B1929 92.701 111.246 117.372 1.00 55.11 O
ATOM 2 P U B1930 92.807 112.350 118.530 1.00 54.38 P
ATOM 3 OP1 U B1930 94.238 112.471 118.908 1.00 53.98 O
ATOM 4 OP2 U B1930 91.792 112.033 119.567 1.00 54.09 O
ATOM 5 O5' U B1930 92.391 113.704 117.806 1.00 53.03 O
ATOM 6 C5' U B1930 92.017 114.866 118.568 1.00 50.20 C
ATOM 7 C4' U B1930 92.493 116.119 117.873 1.00 47.75 C
ATOM 8 O4' U B1930 93.942 116.213 117.956 1.00 46.46 O
ATOM 9 C3' U B1930 92.153 116.215 116.390 1.00 46.37 C
ATOM 10 O3' U B1930 92.031 117.588 116.053 1.00 48.63 O
ATOM 11 C2' U B1930 93.427 115.691 115.743 1.00 45.53 C
ATOM 12 O2' U B1930 93.609 116.120 114.412 1.00 43.76 O
ATOM 13 C1' U B1930 94.473 116.322 116.656 1.00 45.48 C
ATOM 14 N1 U B1930 95.795 115.689 116.631 1.00 46.01 N
ATOM 15 C2 U B1930 96.765 116.265 115.827 1.00 46.78 C
ATOM 16 O2 U B1930 96.563 117.252 115.137 1.00 48.01 O
ATOM 17 N3 U B1930 97.985 115.645 115.861 1.00 46.29 N
ATOM 18 C4 U B1930 98.326 114.539 116.599 1.00 48.07 C
ATOM 19 O4 U B1930 99.495 114.152 116.596 1.00 51.49 O
ATOM 20 C5 U B1930 97.264 113.995 117.392 1.00 48.32 C
ATOM 21 C6 U B1930 96.066 114.574 117.381 1.00 45.63 C
ATOM 22 P U B1931 90.689 118.388 116.412 1.00 50.39 P
ATOM 23 OP1 U B1931 89.830 117.542 117.281 1.00 48.67 O
ATOM 24 OP2 U B1931 90.149 118.934 115.137 1.00 50.96 O
ATOM 25 O5' U B1931 91.202 119.612 117.286 1.00 49.34 O
TER
ATOM 2 P U A1923 105.358 121.934 111.871 1.00 57.70 P
ATOM 3 OP1 U A1923 104.389 123.036 112.120 1.00 56.51 O
ATOM 4 OP2 U A1923 106.540 121.784 112.763 1.00 60.16 O
ATOM 5 O5' U A1923 104.548 120.561 111.881 1.00 56.13 O
ATOM 6 C5' U A1923 103.727 120.184 110.759 1.00 54.94 C
ATOM 7 C4' U A1923 102.282 120.006 111.174 1.00 52.45 C
ATOM 8 O4' U A1923 102.093 118.721 111.822 1.00 50.95 O
ATOM 9 C3' U A1923 101.674 121.058 112.096 1.00 51.46 C
ATOM 10 O3' U A1923 100.348 121.330 111.677 1.00 52.32 O
ATOM 11 C2' U A1923 101.656 120.345 113.447 1.00 52.14 C
ATOM 12 O2' U A1923 100.630 120.789 114.313 1.00 52.50 O
ATOM 13 C1' U A1923 101.388 118.903 113.028 1.00 51.78 C
ATOM 14 N1 U A1923 101.843 117.892 113.995 1.00 53.57 N
ATOM 15 C2 U A1923 100.879 117.109 114.608 1.00 54.95 C
ATOM 16 O2 U A1923 99.683 117.232 114.396 1.00 56.37 O
ATOM 17 N3 U A1923 101.364 116.173 115.484 1.00 55.52 N
ATOM 18 C4 U A1923 102.683 115.942 115.808 1.00 56.31 C
ATOM 19 O4 U A1923 102.962 115.024 116.588 1.00 58.19 O
ATOM 20 C5 U A1923 103.620 116.797 115.144 1.00 54.97 C
ATOM 21 C6 U A1923 103.180 117.717 114.282 1.00 54.04 C
ATOM 22 P A A1924 99.958 122.805 111.167 1.00 53.27 P
ATOM 23 OP1 A A1924 100.412 123.772 112.203 1.00 53.52 O
ATOM 24 OP2 A A1924 98.527 122.788 110.760 1.00 54.40 O
ATOM 25 O5' A A1924 100.837 123.011 109.853 1.00 51.41 O
TER
ATOM 1 O3' C B1929 92.701 111.246 117.372 1.00 55.11 O
ATOM 2 P U B1930 92.807 112.350 118.530 1.00 54.38 P
ATOM 3 OP1 U B1930 94.238 112.471 118.908 1.00 53.98 O
ATOM 4 OP2 U B1930 91.792 112.033 119.567 1.00 54.09 O
ATOM 5 O5' U B1930 92.391 113.704 117.806 1.00 53.03 O
ATOM 6 C5' U B1930 92.017 114.866 118.568 1.00 50.20 C
ATOM 7 C4' U B1930 92.493 116.119 117.873 1.00 47.75 C
ATOM 8 O4' U B1930 93.942 116.213 117.956 1.00 46.46 O
ATOM 9 C3' U B1930 92.153 116.215 116.390 1.00 46.37 C
ATOM 10 O3' U B1930 92.031 117.588 116.053 1.00 48.63 O
ATOM 11 C2' U B1930 93.427 115.691 115.743 1.00 45.53 C
ATOM 12 O2' U B1930 93.609 116.120 114.412 1.00 43.76 O
ATOM 13 C1' U B1930 94.473 116.322 116.656 1.00 45.48 C
ATOM 14 N1 U B1930 95.795 115.689 116.631 1.00 46.01 N
ATOM 15 C2 U B1930 96.765 116.265 115.827 1.00 46.78 C
ATOM 16 O2 U B1930 96.563 117.252 115.137 1.00 48.01 O
ATOM 17 N3 U B1930 97.985 115.645 115.861 1.00 46.29 N
ATOM 18 C4 U B1930 98.326 114.539 116.599 1.00 48.07 C
ATOM 19 O4 U B1930 99.495 114.152 116.596 1.00 51.49 O
ATOM 20 C5 U B1930 97.264 113.995 117.392 1.00 48.32 C
ATOM 21 C6 U B1930 96.066 114.574 117.381 1.00 45.63 C
ATOM 22 P U B1931 90.689 118.388 116.412 1.00 50.39 P
ATOM 23 OP1 U B1931 89.830 117.542 117.281 1.00 48.67 O
ATOM 24 OP2 U B1931 90.149 118.934 115.137 1.00 50.96 O
ATOM 25 O5' U B1931 91.202 119.612 117.286 1.00 49.34 O
TER
Atoms:
C4: (102.683,115.942,115.808)
N3: (101.364,116.173,115.484)
OP1: (104.389,123.036,112.120)
OP2: (106.540,121.784,112.763)
C2: (100.879,117.109,114.608)
C1': (101.388,118.903,113.028)
C3': (101.674,121.058,112.096)
O5': (104.548,120.561,111.881)
O4': (102.093,118.721,111.822)
C5': (103.727,120.184,110.759)
P: (105.358,121.934,111.871)
C4': (102.282,120.006,111.174)
C2': (101.656,120.345,113.447)
O2': (100.630,120.789,114.313)
N1: (101.843,117.892,113.995)
O4: (102.962,115.024,116.588)
O2: (99.683,117.232,114.396)
C6: (103.180,117.717,114.282)
C5: (103.620,116.797,115.144)
O3': (100.348,121.330,111.677)
N3: (101.364,116.173,115.484)
OP1: (104.389,123.036,112.120)
OP2: (106.540,121.784,112.763)
C2: (100.879,117.109,114.608)
C1': (101.388,118.903,113.028)
C3': (101.674,121.058,112.096)
O5': (104.548,120.561,111.881)
O4': (102.093,118.721,111.822)
C5': (103.727,120.184,110.759)
P: (105.358,121.934,111.871)
C4': (102.282,120.006,111.174)
C2': (101.656,120.345,113.447)
O2': (100.630,120.789,114.313)
N1: (101.843,117.892,113.995)
O4: (102.962,115.024,116.588)
O2: (99.683,117.232,114.396)
C6: (103.180,117.717,114.282)
C5: (103.620,116.797,115.144)
O3': (100.348,121.330,111.677)
C4: (98.326,114.539,116.599)
N3: (97.985,115.645,115.861)
OP1: (94.238,112.471,118.908)
OP2: (91.792,112.033,119.567)
C2: (96.765,116.265,115.827)
C1': (94.473,116.322,116.656)
C3': (92.153,116.215,116.390)
O5': (92.391,113.704,117.806)
O4': (93.942,116.213,117.956)
C5': (92.017,114.866,118.568)
P: (92.807,112.350,118.530)
C4': (92.493,116.119,117.873)
C2': (93.427,115.691,115.743)
O2': (93.609,116.120,114.412)
N1: (95.795,115.689,116.631)
O4: (99.495,114.152,116.596)
O2: (96.563,117.252,115.137)
C6: (96.066,114.574,117.381)
C5: (97.264,113.995,117.392)
O3': (92.031,117.588,116.053)
N3: (97.985,115.645,115.861)
OP1: (94.238,112.471,118.908)
OP2: (91.792,112.033,119.567)
C2: (96.765,116.265,115.827)
C1': (94.473,116.322,116.656)
C3': (92.153,116.215,116.390)
O5': (92.391,113.704,117.806)
O4': (93.942,116.213,117.956)
C5': (92.017,114.866,118.568)
P: (92.807,112.350,118.530)
C4': (92.493,116.119,117.873)
C2': (93.427,115.691,115.743)
O2': (93.609,116.120,114.412)
N1: (95.795,115.689,116.631)
O4: (99.495,114.152,116.596)
O2: (96.563,117.252,115.137)
C6: (96.066,114.574,117.381)
C5: (97.264,113.995,117.392)
O3': (92.031,117.588,116.053)
Image (generated by PyMOL):