Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1395:A1394
Extra
PDB:
ATOM 1 O3' U A1394 50.210 178.938 73.837 1.00 41.17 O
ATOM 2 P C A1395 51.261 178.707 72.666 1.00 42.86 P
ATOM 3 OP1 C A1395 51.828 180.013 72.277 1.00 43.69 O
ATOM 4 OP2 C A1395 50.599 177.854 71.643 1.00 43.72 O
ATOM 5 O5' C A1395 52.419 177.908 73.397 1.00 42.13 O
ATOM 6 C5' C A1395 53.342 178.610 74.239 1.00 41.32 C
ATOM 7 C4' C A1395 54.413 177.681 74.734 1.00 42.21 C
ATOM 8 O4' C A1395 53.911 176.810 75.774 1.00 41.21 O
ATOM 9 C3' C A1395 54.980 176.762 73.677 1.00 41.88 C
ATOM 10 O3' C A1395 55.954 177.462 72.909 1.00 41.64 O
ATOM 11 C2' C A1395 55.530 175.606 74.501 1.00 40.98 C
ATOM 12 O2' C A1395 56.824 175.845 74.998 1.00 39.38 O
ATOM 13 C1' C A1395 54.521 175.542 75.655 1.00 40.91 C
ATOM 14 N1 C A1395 53.462 174.552 75.442 1.00 41.20 N
ATOM 15 C2 C A1395 53.777 173.209 75.558 1.00 41.78 C
ATOM 16 O2 C A1395 54.946 172.891 75.839 1.00 43.50 O
ATOM 17 N3 C A1395 52.811 172.287 75.356 1.00 41.88 N
ATOM 18 C4 C A1395 51.571 172.677 75.049 1.00 42.49 C
ATOM 19 N4 C A1395 50.647 171.736 74.859 1.00 42.50 N
ATOM 20 C5 C A1395 51.224 174.047 74.925 1.00 42.56 C
ATOM 21 C6 C A1395 52.191 174.942 75.129 1.00 42.37 C
ATOM 22 P A A1396 56.235 177.019 71.404 1.00 43.19 P
ATOM 23 OP1 A A1396 57.334 177.831 70.824 1.00 42.53 O
ATOM 24 OP2 A A1396 54.941 176.904 70.684 1.00 43.49 O
ATOM 25 O5' A A1396 56.826 175.571 71.617 1.00 42.76 O
TER
ATOM 1 O3' A B1393 47.312 174.446 77.211 1.00 49.26 O
ATOM 2 P U B1394 47.186 174.337 75.627 1.00 49.29 P
ATOM 3 OP1 U B1394 45.747 174.460 75.287 1.00 49.04 O
ATOM 4 OP2 U B1394 47.948 173.134 75.217 1.00 49.86 O
ATOM 5 O5' U B1394 47.996 175.611 75.140 1.00 46.85 O
ATOM 6 C5' U B1394 47.751 176.230 73.882 1.00 44.92 C
ATOM 7 C4' U B1394 48.181 177.664 73.962 1.00 44.26 C
ATOM 8 O4' U B1394 47.349 178.362 74.941 1.00 44.63 O
ATOM 9 C3' U B1394 49.614 177.817 74.447 1.00 42.77 C
ATOM 10 O3' U B1394 50.210 178.938 73.837 1.00 41.17 O
ATOM 11 C2' U B1394 49.449 178.038 75.943 1.00 43.60 C
ATOM 12 O2' U B1394 50.570 178.705 76.481 1.00 44.47 O
ATOM 13 C1' U B1394 48.161 178.867 75.991 1.00 43.19 C
ATOM 14 N1 U B1394 47.405 178.754 77.254 1.00 42.00 N
ATOM 15 C2 U B1394 46.886 179.914 77.815 1.00 43.06 C
ATOM 16 O2 U B1394 47.023 181.029 77.308 1.00 45.21 O
ATOM 17 N3 U B1394 46.200 179.725 78.993 1.00 41.88 N
ATOM 18 C4 U B1394 45.980 178.537 79.650 1.00 40.53 C
ATOM 19 O4 U B1394 45.415 178.548 80.741 1.00 43.63 O
ATOM 20 C5 U B1394 46.533 177.396 79.010 1.00 41.28 C
ATOM 21 C6 U B1394 47.213 177.535 77.868 1.00 41.55 C
ATOM 22 P C B1395 51.261 178.707 72.666 1.00 42.86 P
ATOM 23 OP1 C B1395 51.828 180.013 72.277 1.00 43.69 O
ATOM 24 OP2 C B1395 50.599 177.854 71.643 1.00 43.72 O
ATOM 25 O5' C B1395 52.419 177.908 73.397 1.00 42.13 O
TER
ATOM 2 P C A1395 51.261 178.707 72.666 1.00 42.86 P
ATOM 3 OP1 C A1395 51.828 180.013 72.277 1.00 43.69 O
ATOM 4 OP2 C A1395 50.599 177.854 71.643 1.00 43.72 O
ATOM 5 O5' C A1395 52.419 177.908 73.397 1.00 42.13 O
ATOM 6 C5' C A1395 53.342 178.610 74.239 1.00 41.32 C
ATOM 7 C4' C A1395 54.413 177.681 74.734 1.00 42.21 C
ATOM 8 O4' C A1395 53.911 176.810 75.774 1.00 41.21 O
ATOM 9 C3' C A1395 54.980 176.762 73.677 1.00 41.88 C
ATOM 10 O3' C A1395 55.954 177.462 72.909 1.00 41.64 O
ATOM 11 C2' C A1395 55.530 175.606 74.501 1.00 40.98 C
ATOM 12 O2' C A1395 56.824 175.845 74.998 1.00 39.38 O
ATOM 13 C1' C A1395 54.521 175.542 75.655 1.00 40.91 C
ATOM 14 N1 C A1395 53.462 174.552 75.442 1.00 41.20 N
ATOM 15 C2 C A1395 53.777 173.209 75.558 1.00 41.78 C
ATOM 16 O2 C A1395 54.946 172.891 75.839 1.00 43.50 O
ATOM 17 N3 C A1395 52.811 172.287 75.356 1.00 41.88 N
ATOM 18 C4 C A1395 51.571 172.677 75.049 1.00 42.49 C
ATOM 19 N4 C A1395 50.647 171.736 74.859 1.00 42.50 N
ATOM 20 C5 C A1395 51.224 174.047 74.925 1.00 42.56 C
ATOM 21 C6 C A1395 52.191 174.942 75.129 1.00 42.37 C
ATOM 22 P A A1396 56.235 177.019 71.404 1.00 43.19 P
ATOM 23 OP1 A A1396 57.334 177.831 70.824 1.00 42.53 O
ATOM 24 OP2 A A1396 54.941 176.904 70.684 1.00 43.49 O
ATOM 25 O5' A A1396 56.826 175.571 71.617 1.00 42.76 O
TER
ATOM 1 O3' A B1393 47.312 174.446 77.211 1.00 49.26 O
ATOM 2 P U B1394 47.186 174.337 75.627 1.00 49.29 P
ATOM 3 OP1 U B1394 45.747 174.460 75.287 1.00 49.04 O
ATOM 4 OP2 U B1394 47.948 173.134 75.217 1.00 49.86 O
ATOM 5 O5' U B1394 47.996 175.611 75.140 1.00 46.85 O
ATOM 6 C5' U B1394 47.751 176.230 73.882 1.00 44.92 C
ATOM 7 C4' U B1394 48.181 177.664 73.962 1.00 44.26 C
ATOM 8 O4' U B1394 47.349 178.362 74.941 1.00 44.63 O
ATOM 9 C3' U B1394 49.614 177.817 74.447 1.00 42.77 C
ATOM 10 O3' U B1394 50.210 178.938 73.837 1.00 41.17 O
ATOM 11 C2' U B1394 49.449 178.038 75.943 1.00 43.60 C
ATOM 12 O2' U B1394 50.570 178.705 76.481 1.00 44.47 O
ATOM 13 C1' U B1394 48.161 178.867 75.991 1.00 43.19 C
ATOM 14 N1 U B1394 47.405 178.754 77.254 1.00 42.00 N
ATOM 15 C2 U B1394 46.886 179.914 77.815 1.00 43.06 C
ATOM 16 O2 U B1394 47.023 181.029 77.308 1.00 45.21 O
ATOM 17 N3 U B1394 46.200 179.725 78.993 1.00 41.88 N
ATOM 18 C4 U B1394 45.980 178.537 79.650 1.00 40.53 C
ATOM 19 O4 U B1394 45.415 178.548 80.741 1.00 43.63 O
ATOM 20 C5 U B1394 46.533 177.396 79.010 1.00 41.28 C
ATOM 21 C6 U B1394 47.213 177.535 77.868 1.00 41.55 C
ATOM 22 P C B1395 51.261 178.707 72.666 1.00 42.86 P
ATOM 23 OP1 C B1395 51.828 180.013 72.277 1.00 43.69 O
ATOM 24 OP2 C B1395 50.599 177.854 71.643 1.00 43.72 O
ATOM 25 O5' C B1395 52.419 177.908 73.397 1.00 42.13 O
TER
Atoms:
C2: (53.777,173.209,75.558)
OP1: (51.828,180.013,72.277)
OP2: (50.599,177.854,71.643)
C4: (51.571,172.677,75.049)
O5': (52.419,177.908,73.397)
C3': (54.980,176.762,73.677)
C1': (54.521,175.542,75.655)
O4': (53.911,176.810,75.774)
C5': (53.342,178.610,74.239)
P: (51.261,178.707,72.666)
O2: (54.946,172.891,75.839)
C4': (54.413,177.681,74.734)
C2': (55.530,175.606,74.501)
O2': (56.824,175.845,74.998)
N1: (53.462,174.552,75.442)
N3: (52.811,172.287,75.356)
N4: (50.647,171.736,74.859)
C6: (52.191,174.942,75.129)
C5: (51.224,174.047,74.925)
O3': (55.954,177.462,72.909)
OP1: (51.828,180.013,72.277)
OP2: (50.599,177.854,71.643)
C4: (51.571,172.677,75.049)
O5': (52.419,177.908,73.397)
C3': (54.980,176.762,73.677)
C1': (54.521,175.542,75.655)
O4': (53.911,176.810,75.774)
C5': (53.342,178.610,74.239)
P: (51.261,178.707,72.666)
O2: (54.946,172.891,75.839)
C4': (54.413,177.681,74.734)
C2': (55.530,175.606,74.501)
O2': (56.824,175.845,74.998)
N1: (53.462,174.552,75.442)
N3: (52.811,172.287,75.356)
N4: (50.647,171.736,74.859)
C6: (52.191,174.942,75.129)
C5: (51.224,174.047,74.925)
O3': (55.954,177.462,72.909)
C4: (45.980,178.537,79.650)
N3: (46.200,179.725,78.993)
OP1: (45.747,174.460,75.287)
OP2: (47.948,173.134,75.217)
C2: (46.886,179.914,77.815)
C1': (48.161,178.867,75.991)
C3': (49.614,177.817,74.447)
O5': (47.996,175.611,75.140)
O4': (47.349,178.362,74.941)
C5': (47.751,176.230,73.882)
P: (47.186,174.337,75.627)
C4': (48.181,177.664,73.962)
C2': (49.449,178.038,75.943)
O2': (50.570,178.705,76.481)
N1: (47.405,178.754,77.254)
O4: (45.415,178.548,80.741)
O2: (47.023,181.029,77.308)
C6: (47.213,177.535,77.868)
C5: (46.533,177.396,79.010)
O3': (50.210,178.938,73.837)
N3: (46.200,179.725,78.993)
OP1: (45.747,174.460,75.287)
OP2: (47.948,173.134,75.217)
C2: (46.886,179.914,77.815)
C1': (48.161,178.867,75.991)
C3': (49.614,177.817,74.447)
O5': (47.996,175.611,75.140)
O4': (47.349,178.362,74.941)
C5': (47.751,176.230,73.882)
P: (47.186,174.337,75.627)
C4': (48.181,177.664,73.962)
C2': (49.449,178.038,75.943)
O2': (50.570,178.705,76.481)
N1: (47.405,178.754,77.254)
O4: (45.415,178.548,80.741)
O2: (47.023,181.029,77.308)
C6: (47.213,177.535,77.868)
C5: (46.533,177.396,79.010)
O3': (50.210,178.938,73.837)
Image (generated by PyMOL):